RNA–Protein interactions for RNA: ENST00000515219.5

DDR1-277, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-277ENST00000515219 U2AF1Q01081 240 aaKnown RBP eCLIP23.28■■□□□ 1.32
DDR1-277ENST00000515219 NFATC2IPQ8NCF5 419 aa23.28■■□□□ 1.32
DDR1-277ENST00000515219 PRKAR2BP31323 418 aa23.26■■□□□ 1.31
DDR1-277ENST00000515219 ATP6V1AP38606 617 aa23.26■■□□□ 1.31
DDR1-277ENST00000515219 RBM42Q9BTD8 480 aaKnown RBP23.26■■□□□ 1.31
DDR1-277ENST00000515219 RSPH6AQ9H0K4 717 aa23.26■■□□□ 1.31
DDR1-277ENST00000515219 LGR6Q9HBX8 967 aa23.26■■□□□ 1.31
DDR1-277ENST00000515219 RNMTO43148 476 aaKnown RBP23.25■■□□□ 1.31
DDR1-277ENST00000515219 MSH5O43196 834 aa23.25■■□□□ 1.31
DDR1-277ENST00000515219 RALBP1Q15311 655 aa23.25■■□□□ 1.31
DDR1-277ENST00000515219 GAS2L2Q8NHY3 880 aa23.25■■□□□ 1.31
DDR1-277ENST00000515219 AK7Q96M32 723 aa23.25■■□□□ 1.31
DDR1-277ENST00000515219 PTGER2P43116 358 aa23.24■■□□□ 1.31
DDR1-277ENST00000515219 SLC16A10Q8TF71 515 aa23.24■■□□□ 1.31
DDR1-277ENST00000515219 ITPK1Q13572 414 aa23.23■■□□□ 1.31
DDR1-277ENST00000515219 LINC00116Q8NCU8 138 aa23.23■■□□□ 1.31
DDR1-277ENST00000515219 SLC52A2Q9HAB3 445 aa23.23■■□□□ 1.31
DDR1-277ENST00000515219 COL23A1Q86Y22 540 aaPredicted RBP23.22■■□□□ 1.31
DDR1-277ENST00000515219 PHACTR3Q96KR7 559 aa23.22■■□□□ 1.31
DDR1-277ENST00000515219 ADAMTS7Q9UKP4 1686 aa23.22■■□□□ 1.31
DDR1-277ENST00000515219 FCHSD2O94868 740 aa23.21■■□□□ 1.31
DDR1-277ENST00000515219 MAP3K5Q99683 1374 aa23.21■■□□□ 1.31
DDR1-277ENST00000515219 ZNF831Q5JPB2 1677 aa23.21■■□□□ 1.31
DDR1-277ENST00000515219 UBR3Q6ZT12 1888 aa23.21■■□□□ 1.31
DDR1-277ENST00000515219 MRC1P22897 1456 aa23.2■■□□□ 1.3
DDR1-277ENST00000515219 GNAT3A8MTJ3 354 aa23.2■■□□□ 1.3
DDR1-277ENST00000515219 PTCD1O75127 700 aaKnown RBP23.2■■□□□ 1.3
DDR1-277ENST00000515219 SLC4A9Q96Q91 983 aa23.2■■□□□ 1.3
DDR1-277ENST00000515219 FLAD1Q8NFF5 587 aa23.19■■□□□ 1.3
DDR1-277ENST00000515219 SGIP1Q9BQI5 828 aa23.19■■□□□ 1.3
DDR1-277ENST00000515219 COL5A3P25940 1745 aaPredicted RBP23.17■■□□□ 1.3
DDR1-277ENST00000515219 PHF14O94880 888 aa23.17■■□□□ 1.3
DDR1-277ENST00000515219 GNPATO15228 680 aa23.16■■□□□ 1.3
DDR1-277ENST00000515219 POLD1P28340 1107 aa23.16■■□□□ 1.3
DDR1-277ENST00000515219 SMIM5Q71RC9 77 aa23.16■■□□□ 1.3
DDR1-277ENST00000515219 AMIGO3Q86WK7 504 aa23.16■■□□□ 1.3
DDR1-277ENST00000515219 COL24A1Q17RW2 1714 aa23.16■■□□□ 1.3
DDR1-277ENST00000515219 MYBBP1AQ9BQG0 1328 aaKnown RBP23.15■■□□□ 1.3
DDR1-277ENST00000515219 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.15■■□□□ 1.3
DDR1-277ENST00000515219 TEFQ10587 303 aa23.15■■□□□ 1.3
DDR1-277ENST00000515219 SLC39A6Q13433 755 aa23.15■■□□□ 1.3
DDR1-277ENST00000515219 IL17REQ8NFR9 667 aa23.15■■□□□ 1.3
DDR1-277ENST00000515219 ARXQ96QS3 562 aa23.15■■□□□ 1.3
DDR1-277ENST00000515219 NEFMP07197 916 aa23.14■■□□□ 1.29
DDR1-277ENST00000515219 SSFA2P28290 1259 aa23.14■■□□□ 1.29
DDR1-277ENST00000515219 TJP1Q07157 1748 aa23.13■■□□□ 1.29
DDR1-277ENST00000515219 SIPA1L3O60292 1781 aaPredicted RBP23.12■■□□□ 1.29
DDR1-277ENST00000515219 MSL1Q68DK7 614 aa23.12■■□□□ 1.29
DDR1-277ENST00000515219 FHDC1Q9C0D6 1143 aaPredicted RBP23.12■■□□□ 1.29
DDR1-277ENST00000515219 RTF1Q92541 710 aaKnown RBP23.11■■□□□ 1.29
DDR1-277ENST00000515219 RTCBQ9Y3I0 505 aaKnown RBP23.11■■□□□ 1.29
DDR1-277ENST00000515219 MYH14Q7Z406 1995 aaKnown RBP23.1■■□□□ 1.29
DDR1-277ENST00000515219 CNTNAP4Q9C0A0 1308 aa23.1■■□□□ 1.29
DDR1-277ENST00000515219 RC3H1Q5TC82 1133 aaKnown RBP23.1■■□□□ 1.29
DDR1-277ENST00000515219 CICQ96RK0 1608 aaPredicted RBP23.1■■□□□ 1.29
DDR1-277ENST00000515219 KCPQ6ZWJ8 1503 aa23.09■■□□□ 1.29
DDR1-277ENST00000515219 TTC5Q8N0Z6 440 aa23.09■■□□□ 1.29
DDR1-277ENST00000515219 PNNQ9H307 717 aaKnown RBP23.09■■□□□ 1.29
DDR1-277ENST00000515219 CEMIPQ8WUJ3 1361 aa23.09■■□□□ 1.29
DDR1-277ENST00000515219 UBR2Q8IWV8 1755 aa23.09■■□□□ 1.29
DDR1-277ENST00000515219 DLG5Q8TDM6 1919 aa23.08■■□□□ 1.29
DDR1-277ENST00000515219 ZNF316A6NFI3 1004 aaPredicted RBP23.08■■□□□ 1.29
DDR1-277ENST00000515219 TRAPPC3LQ5T215 181 aa23.08■■□□□ 1.29
DDR1-277ENST00000515219 DNAJC10Q8IXB1 793 aa23.08■■□□□ 1.29
DDR1-277ENST00000515219 KLHL34Q8N239 644 aa23.08■■□□□ 1.29
DDR1-277ENST00000515219 SYT17Q9BSW7 474 aa23.08■■□□□ 1.29
DDR1-277ENST00000515219 PRKRIP1Q9H875 184 aaPredicted RBP23.08■■□□□ 1.29
DDR1-277ENST00000515219 RPS6KA4O75676 772 aa23.07■■□□□ 1.28
DDR1-277ENST00000515219 CRKLP46109 303 aaKnown RBP23.07■■□□□ 1.28
DDR1-277ENST00000515219 MCM10Q7L590 875 aa23.07■■□□□ 1.28
DDR1-277ENST00000515219 PLEKHF1Q96S99 279 aa23.07■■□□□ 1.28
DDR1-277ENST00000515219 MAPK8IP3Q9UPT6 1336 aa23.07■■□□□ 1.28
DDR1-277ENST00000515219 HTATSF1O43719 755 aaKnown RBP23.05■■□□□ 1.28
DDR1-277ENST00000515219 DCTN1Q14203 1278 aa23.05■■□□□ 1.28
DDR1-277ENST00000515219 ZNF790Q6PG37 636 aa23.05■■□□□ 1.28
DDR1-277ENST00000515219 DCAF8L1A6NGE4 600 aa23.04■■□□□ 1.28
DDR1-277ENST00000515219 BTBD11A6QL63 1104 aa23.04■■□□□ 1.28
DDR1-277ENST00000515219 ADRA2BP18089 450 aa23.04■■□□□ 1.28
DDR1-277ENST00000515219 VSIG10Q8N0Z9 540 aa23.04■■□□□ 1.28
DDR1-277ENST00000515219 ARHGEF1Q92888 912 aaKnown RBP23.04■■□□□ 1.28
DDR1-277ENST00000515219 C4AP0C0L4 1744 aa23.02■■□□□ 1.28
DDR1-277ENST00000515219 RFC4P35249 363 aa23.02■■□□□ 1.28
DDR1-277ENST00000515219 NFE2L2Q16236 605 aa23.02■■□□□ 1.28
DDR1-277ENST00000515219 INTS5Q6P9B9 1019 aaKnown RBP23.02■■□□□ 1.28
DDR1-277ENST00000515219 ZNF496Q96IT1 587 aaPredicted RBP23.02■■□□□ 1.28
DDR1-277ENST00000515219 CCDC87Q9NVE4 849 aa23.02■■□□□ 1.28
DDR1-277ENST00000515219 CYP19A1P11511 503 aaPredicted RBP23.01■■□□□ 1.27
DDR1-277ENST00000515219 WDR43Q15061 677 aaKnown RBP eCLIP23■■□□□ 1.27
DDR1-277ENST00000515219 FMNL2Q96PY5 1086 aa23■■□□□ 1.27
DDR1-277ENST00000515219 HEG1Q9ULI3 1381 aa23■■□□□ 1.27
DDR1-277ENST00000515219 KCNQ3O43525 872 aa22.99■■□□□ 1.27
DDR1-277ENST00000515219 STARD3NLO95772 234 aa22.97■■□□□ 1.27
DDR1-277ENST00000515219 ZBTB1Q9Y2K1 713 aa22.97■■□□□ 1.27
DDR1-277ENST00000515219 TAF7Q15545 349 aaPredicted RBP22.96■■□□□ 1.27
DDR1-277ENST00000515219 CCDC146Q8IYE0 955 aa22.96■■□□□ 1.27
DDR1-277ENST00000515219 NLGN1Q8N2Q7 840 aa22.96■■□□□ 1.27
DDR1-277ENST00000515219 TEX13AQ9BXU3 409 aaPredicted RBP22.96■■□□□ 1.27
DDR1-277ENST00000515219 SOS1Q07889 1333 aaPredicted RBP22.96■■□□□ 1.27
DDR1-277ENST00000515219 GYS1P13807 737 aa22.95■■□□□ 1.26
DDR1-277ENST00000515219 CANXP27824 592 aaKnown RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms