RNA–Protein interactions for RNA: ENST00000515031.5

LINC00504-204, long intergenic non-protein coding RNA 504, humanhuman

TSL 3

Gene LINC00504, Length 987 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00504-204ENST00000515031 CERKQ8TCT0 537 aa10.46□□□□□ -0.73
LINC00504-204ENST00000515031 TBC1D32Q96NH3 1257 aa10.46□□□□□ -0.73
LINC00504-204ENST00000515031 NBPF3Q9H094 633 aa10.46□□□□□ -0.73
LINC00504-204ENST00000515031 TERF2IPQ9NYB0 399 aa10.46□□□□□ -0.73
LINC00504-204ENST00000515031 USP19O94966 1318 aa10.46□□□□□ -0.73
LINC00504-204ENST00000515031 AGLP35573 1532 aa10.46□□□□□ -0.74
LINC00504-204ENST00000515031 SENP3-EIF4A1A0A087X0R7 540 aa10.45□□□□□ -0.74
LINC00504-204ENST00000515031 PTPN5P54829 565 aa10.45□□□□□ -0.74
LINC00504-204ENST00000515031 NLRP7Q8WX94 980 aa10.45□□□□□ -0.74
LINC00504-204ENST00000515031 PNMA3Q9UL41 463 aa10.45□□□□□ -0.74
LINC00504-204ENST00000515031 DDX19BQ9UMR2 479 aa10.45□□□□□ -0.74
LINC00504-204ENST00000515031 MTHFSP49914 203 aa10.44□□□□□ -0.74
LINC00504-204ENST00000515031 CALD1Q05682 793 aaKnown RBP10.44□□□□□ -0.74
LINC00504-204ENST00000515031 PDE4DQ08499 809 aa10.44□□□□□ -0.74
LINC00504-204ENST00000515031 ALDH1L2Q3SY69 923 aa10.44□□□□□ -0.74
LINC00504-204ENST00000515031 NUDT18Q6ZVK8 323 aa10.44□□□□□ -0.74
LINC00504-204ENST00000515031 TATDN2Q93075 761 aa10.44□□□□□ -0.74
LINC00504-204ENST00000515031 WNT2BQ93097 391 aa10.44□□□□□ -0.74
LINC00504-204ENST00000515031 ISY1Q9ULR0 285 aaKnown RBP10.44□□□□□ -0.74
LINC00504-204ENST00000515031 IPO8O15397 1037 aaKnown RBP10.43□□□□□ -0.74
LINC00504-204ENST00000515031 ONECUT3O60422 494 aaPredicted RBP10.43□□□□□ -0.74
LINC00504-204ENST00000515031 IGHDP01880 384 aa10.43□□□□□ -0.74
LINC00504-204ENST00000515031 RGS3P49796 1198 aa10.43□□□□□ -0.74
LINC00504-204ENST00000515031 SLC12A5Q9H2X9 1139 aa10.43□□□□□ -0.74
LINC00504-204ENST00000515031 ARHGEF40Q8TER5 1519 aa10.43□□□□□ -0.74
LINC00504-204ENST00000515031 A0A1W2PP64 1363 aa10.42□□□□□ -0.74
LINC00504-204ENST00000515031 PIK3R4Q99570 1358 aa10.42□□□□□ -0.74
LINC00504-204ENST00000515031 DZIP1LQ8IYY4 767 aaKnown RBP10.42□□□□□ -0.74
LINC00504-204ENST00000515031 ZFRQ96KR1 1074 aaKnown RBP10.42□□□□□ -0.74
LINC00504-204ENST00000515031 PHOX2BQ99453 314 aa10.42□□□□□ -0.74
LINC00504-204ENST00000515031 TRAK1Q9UPV9 953 aa10.42□□□□□ -0.74
LINC00504-204ENST00000515031 COG6Q9Y2V7 657 aa10.42□□□□□ -0.74
LINC00504-204ENST00000515031 CD163L1Q9NR16 1453 aa10.42□□□□□ -0.74
LINC00504-204ENST00000515031 YTHDC2Q9H6S0 1430 aaKnown RBP10.41□□□□□ -0.74
LINC00504-204ENST00000515031 KIF24Q5T7B8 1368 aa10.41□□□□□ -0.74
LINC00504-204ENST00000515031 PTMSP20962 102 aa10.41□□□□□ -0.74
LINC00504-204ENST00000515031 BCAMP50895 628 aa10.41□□□□□ -0.74
LINC00504-204ENST00000515031 L1TD1Q5T7N2 865 aaKnown RBP10.41□□□□□ -0.74
LINC00504-204ENST00000515031 SMC5Q8IY18 1101 aa10.41□□□□□ -0.74
LINC00504-204ENST00000515031 TTC13Q8NBP0 860 aa10.41□□□□□ -0.74
LINC00504-204ENST00000515031 PLEKHF1Q96S99 279 aa10.41□□□□□ -0.74
LINC00504-204ENST00000515031 FTSJ3Q8IY81 847 aaKnown RBP10.4□□□□□ -0.74
LINC00504-204ENST00000515031 PANK1Q8TE04 598 aa10.4□□□□□ -0.74
LINC00504-204ENST00000515031 ARHGAP45Q92619 1136 aa10.4□□□□□ -0.74
LINC00504-204ENST00000515031 ANTXR1Q9H6X2 564 aa10.4□□□□□ -0.74
LINC00504-204ENST00000515031 KNDC1Q76NI1 1749 aa10.4□□□□□ -0.74
LINC00504-204ENST00000515031 CDK12Q9NYV4 1490 aaPredicted RBP10.4□□□□□ -0.74
LINC00504-204ENST00000515031 ALKQ9UM73 1620 aa10.4□□□□□ -0.75
LINC00504-204ENST00000515031 U2AF1L5P0DN76 240 aaPredicted RBP10.39□□□□□ -0.75
LINC00504-204ENST00000515031 U2AF1Q01081 240 aaKnown RBP eCLIP10.39□□□□□ -0.75
LINC00504-204ENST00000515031 FAM98CQ17RN3 349 aaKnown RBP10.39□□□□□ -0.75
LINC00504-204ENST00000515031 ATF7IPQ6VMQ6 1270 aa10.39□□□□□ -0.75
LINC00504-204ENST00000515031 KDM4CQ9H3R0 1056 aa10.39□□□□□ -0.75
LINC00504-204ENST00000515031 PTCH1Q13635 1447 aa10.39□□□□□ -0.75
LINC00504-204ENST00000515031 FAM135BQ49AJ0 1406 aa10.39□□□□□ -0.75
LINC00504-204ENST00000515031 NCOA3Q9Y6Q9 1424 aa10.39□□□□□ -0.75
LINC00504-204ENST00000515031 SPATA31D1Q6ZQQ2 1576 aa10.39□□□□□ -0.75
LINC00504-204ENST00000515031 AATKQ6ZMQ8 1374 aa10.39□□□□□ -0.75
LINC00504-204ENST00000515031 SETD1AO15047 1707 aaKnown RBP10.38□□□□□ -0.75
LINC00504-204ENST00000515031 MYO5BQ9ULV0 1848 aa10.38□□□□□ -0.75
LINC00504-204ENST00000515031 TMPOP42166 694 aaKnown RBP10.38□□□□□ -0.75
LINC00504-204ENST00000515031 THSD4Q6ZMP0 1018 aa10.38□□□□□ -0.75
LINC00504-204ENST00000515031 HDGFL2Q7Z4V5 671 aaPredicted RBP10.38□□□□□ -0.75
LINC00504-204ENST00000515031 LAPTM4BQ86VI4 370 aa10.38□□□□□ -0.75
LINC00504-204ENST00000515031 REPIN1Q9BWE0 567 aaKnown RBP10.38□□□□□ -0.75
LINC00504-204ENST00000515031 PDZRN3Q9UPQ7 1066 aa10.38□□□□□ -0.75
LINC00504-204ENST00000515031 PCDHB15Q9Y5E8 787 aa10.38□□□□□ -0.75
LINC00504-204ENST00000515031 CFAP65Q6ZU64 1925 aaKnown RBP10.38□□□□□ -0.75
LINC00504-204ENST00000515031 LRRC7Q96NW7 1537 aa10.38□□□□□ -0.75
LINC00504-204ENST00000515031 RLBP1P12271 317 aa10.37□□□□□ -0.75
LINC00504-204ENST00000515031 EDC4Q6P2E9 1401 aaKnown RBP10.37□□□□□ -0.75
LINC00504-204ENST00000515031 FAM43AQ8N2R8 423 aa10.37□□□□□ -0.75
LINC00504-204ENST00000515031 FRAT1Q92837 279 aaPredicted RBP10.37□□□□□ -0.75
LINC00504-204ENST00000515031 RBM27Q9P2N5 1060 aaKnown RBP10.37□□□□□ -0.75
LINC00504-204ENST00000515031 TECPR2O15040 1411 aa10.36□□□□□ -0.75
LINC00504-204ENST00000515031 YEATS2Q9ULM3 1422 aa10.36□□□□□ -0.75
LINC00504-204ENST00000515031 NBPF26B4DH59 902 aa10.36□□□□□ -0.75
LINC00504-204ENST00000515031 LMOD3Q0VAK6 560 aa10.36□□□□□ -0.75
LINC00504-204ENST00000515031 TTLL12Q14166 644 aaPredicted RBP10.36□□□□□ -0.75
LINC00504-204ENST00000515031 SAMD7Q7Z3H4 446 aa10.36□□□□□ -0.75
LINC00504-204ENST00000515031 PARP9Q8IXQ6 854 aa10.36□□□□□ -0.75
LINC00504-204ENST00000515031 ANKK1Q8NFD2 765 aa10.36□□□□□ -0.75
LINC00504-204ENST00000515031 SNX21Q969T3 373 aa10.36□□□□□ -0.75
LINC00504-204ENST00000515031 SIRT1Q96EB6 747 aa10.36□□□□□ -0.75
LINC00504-204ENST00000515031 SMC4Q9NTJ3 1288 aa10.36□□□□□ -0.75
LINC00504-204ENST00000515031 ADGRG1Q9Y653 693 aa10.36□□□□□ -0.75
LINC00504-204ENST00000515031 DIAPH1O60610 1272 aaKnown RBP10.35□□□□□ -0.75
LINC00504-204ENST00000515031 FRAT2O75474 233 aaPredicted RBP10.35□□□□□ -0.75
LINC00504-204ENST00000515031 TRIM27P14373 513 aa10.35□□□□□ -0.75
LINC00504-204ENST00000515031 RBM25P49756 843 aaKnown RBP10.35□□□□□ -0.75
LINC00504-204ENST00000515031 GGT6Q6P531 493 aa10.35□□□□□ -0.75
LINC00504-204ENST00000515031 SKAP1Q86WV1 359 aa10.35□□□□□ -0.75
LINC00504-204ENST00000515031 IL27Q8NEV9 243 aa10.35□□□□□ -0.75
LINC00504-204ENST00000515031 GCC1Q96CN9 775 aa10.35□□□□□ -0.75
LINC00504-204ENST00000515031 EYA1Q99502 592 aa10.35□□□□□ -0.75
LINC00504-204ENST00000515031 ZBTB40Q9NUA8 1239 aa10.35□□□□□ -0.75
LINC00504-204ENST00000515031 CHMP5Q9NZZ3 219 aa10.35□□□□□ -0.75
LINC00504-204ENST00000515031 HCSTQ9UBK5 93 aa10.35□□□□□ -0.75
LINC00504-204ENST00000515031 MON2Q7Z3U7 1717 aa10.35□□□□□ -0.75
LINC00504-204ENST00000515031 NRKQ7Z2Y5 1582 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms