RNA–Protein interactions for RNA: ENST00000515022.5

TRIM6-211, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-211ENST00000515022 TNS4Q8IZW8 715 aa11.93□□□□□ -0.5
TRIM6-211ENST00000515022 BCS1LQ9Y276 419 aa11.93□□□□□ -0.5
TRIM6-211ENST00000515022 A0A0G2JLW4 131 aa11.92□□□□□ -0.5
TRIM6-211ENST00000515022 RRS1Q15050 365 aaKnown RBP11.92□□□□□ -0.5
TRIM6-211ENST00000515022 KLRG1Q96E93 195 aa11.92□□□□□ -0.5
TRIM6-211ENST00000515022 CICQ96RK0 1608 aaPredicted RBP11.91□□□□□ -0.5
TRIM6-211ENST00000515022 VASPP50552 380 aaPredicted RBP11.91□□□□□ -0.5
TRIM6-211ENST00000515022 NEUROD1Q13562 356 aa11.91□□□□□ -0.5
TRIM6-211ENST00000515022 LINC00116Q8NCU8 138 aa11.91□□□□□ -0.5
TRIM6-211ENST00000515022 RAPGEF4Q8WZA2 1011 aa11.91□□□□□ -0.5
TRIM6-211ENST00000515022 PXDNLA1KZ92 1463 aa11.9□□□□□ -0.5
TRIM6-211ENST00000515022 MMP10P09238 476 aa11.9□□□□□ -0.5
TRIM6-211ENST00000515022 TATP17735 454 aaPredicted RBP11.9□□□□□ -0.5
TRIM6-211ENST00000515022 COG3Q96JB2 828 aa11.9□□□□□ -0.5
TRIM6-211ENST00000515022 KIAA1551Q9HCM1 1747 aa11.9□□□□□ -0.5
TRIM6-211ENST00000515022 TERF2IPQ9NYB0 399 aa11.9□□□□□ -0.5
TRIM6-211ENST00000515022 CYP27B1O15528 508 aa11.89□□□□□ -0.51
TRIM6-211ENST00000515022 PIGBQ92521 554 aa11.89□□□□□ -0.51
TRIM6-211ENST00000515022 GNPATO15228 680 aa11.88□□□□□ -0.51
TRIM6-211ENST00000515022 FCHSD2O94868 740 aa11.88□□□□□ -0.51
TRIM6-211ENST00000515022 DPEP1P16444 411 aa11.88□□□□□ -0.51
TRIM6-211ENST00000515022 PRELPP51888 382 aa11.88□□□□□ -0.51
TRIM6-211ENST00000515022 ITPK1Q13572 414 aa11.88□□□□□ -0.51
TRIM6-211ENST00000515022 C9orf131Q5VYM1 1079 aa11.88□□□□□ -0.51
TRIM6-211ENST00000515022 C16orf71Q8IYS4 520 aaPredicted RBP11.88□□□□□ -0.51
TRIM6-211ENST00000515022 JMYQ8N9B5 988 aa11.88□□□□□ -0.51
TRIM6-211ENST00000515022 RBM46Q8TBY0 533 aaKnown RBP11.88□□□□□ -0.51
TRIM6-211ENST00000515022 MAP2P11137 1827 aaKnown RBP11.88□□□□□ -0.51
TRIM6-211ENST00000515022 PCDH11XQ9BZA7 1347 aa11.87□□□□□ -0.51
TRIM6-211ENST00000515022 PCDH11YQ9BZA8 1340 aa11.87□□□□□ -0.51
TRIM6-211ENST00000515022 SSFA2P28290 1259 aa11.87□□□□□ -0.51
TRIM6-211ENST00000515022 SMARCC1Q92922 1105 aaPredicted RBP11.87□□□□□ -0.51
TRIM6-211ENST00000515022 KIF13BQ9NQT8 1826 aa11.87□□□□□ -0.51
TRIM6-211ENST00000515022 KCPQ6ZWJ8 1503 aa11.86□□□□□ -0.51
TRIM6-211ENST00000515022 LOC102724428A0A0B4J2F2 783 aa11.86□□□□□ -0.51
TRIM6-211ENST00000515022 FXR2P51116 673 aaKnown RBP eCLIP11.86□□□□□ -0.51
TRIM6-211ENST00000515022 SIK1P57059 783 aa11.86□□□□□ -0.51
TRIM6-211ENST00000515022 HSP90AB2PQ58FF8 381 aa11.86□□□□□ -0.51
TRIM6-211ENST00000515022 PLCD3Q8N3E9 789 aa11.86□□□□□ -0.51
TRIM6-211ENST00000515022 CARD11Q9BXL7 1154 aa11.86□□□□□ -0.51
TRIM6-211ENST00000515022 RRAGCQ9HB90 399 aa11.86□□□□□ -0.51
TRIM6-211ENST00000515022 CGNL1Q0VF96 1302 aa11.86□□□□□ -0.51
TRIM6-211ENST00000515022 GGNBP2Q9H3C7 697 aa11.85□□□□□ -0.51
TRIM6-211ENST00000515022 ASAP1Q9ULH1 1129 aa11.85□□□□□ -0.51
TRIM6-211ENST00000515022 ATP6V1AP38606 617 aa11.84□□□□□ -0.51
TRIM6-211ENST00000515022 MIER1Q8N108 512 aa11.84□□□□□ -0.51
TRIM6-211ENST00000515022 BRCA1P38398 1863 aaKnown RBP11.84□□□□□ -0.51
TRIM6-211ENST00000515022 PKD1L3Q7Z443 1732 aa11.83□□□□□ -0.52
TRIM6-211ENST00000515022 TGFB2P61812 414 aa11.83□□□□□ -0.52
TRIM6-211ENST00000515022 FSTL1Q12841 308 aa11.83□□□□□ -0.52
TRIM6-211ENST00000515022 PIP4P2Q8N4L2 257 aa11.83□□□□□ -0.52
TRIM6-211ENST00000515022 RNF181Q9P0P0 153 aa11.83□□□□□ -0.52
TRIM6-211ENST00000515022 C10orf71Q711Q0 1435 aa11.83□□□□□ -0.52
TRIM6-211ENST00000515022 SMG6Q86US8 1419 aaKnown RBP11.83□□□□□ -0.52
TRIM6-211ENST00000515022 NSD3Q9BZ95 1437 aa11.83□□□□□ -0.52
TRIM6-211ENST00000515022 RTL1A6NKG5 1358 aa11.82□□□□□ -0.52
TRIM6-211ENST00000515022 HSPA1AP0DMV8 641 aaKnown RBP11.82□□□□□ -0.52
TRIM6-211ENST00000515022 HSPA1BP0DMV9 641 aaKnown RBP11.82□□□□□ -0.52
TRIM6-211ENST00000515022 SBF1O95248 1867 aa11.81□□□□□ -0.52
TRIM6-211ENST00000515022 KCNA3P22001 575 aa11.81□□□□□ -0.52
TRIM6-211ENST00000515022 TMF1P82094 1093 aa11.81□□□□□ -0.52
TRIM6-211ENST00000515022 PCGF6Q9BYE7 350 aa11.81□□□□□ -0.52
TRIM6-211ENST00000515022 CCDC87Q9NVE4 849 aa11.81□□□□□ -0.52
TRIM6-211ENST00000515022 TMOD3Q9NYL9 352 aa11.81□□□□□ -0.52
TRIM6-211ENST00000515022 ARFGEF1Q9Y6D6 1849 aa11.81□□□□□ -0.52
TRIM6-211ENST00000515022 C4AP0C0L4 1744 aa11.8□□□□□ -0.52
TRIM6-211ENST00000515022 FYB1O15117 783 aa11.8□□□□□ -0.52
TRIM6-211ENST00000515022 PRKAR2AP13861 404 aaKnown RBP11.8□□□□□ -0.52
TRIM6-211ENST00000515022 HMGB2P26583 209 aaKnown RBP11.8□□□□□ -0.52
TRIM6-211ENST00000515022 TRAPPC3LQ5T215 181 aa11.8□□□□□ -0.52
TRIM6-211ENST00000515022 ARHGEF1Q92888 912 aaKnown RBP11.8□□□□□ -0.52
TRIM6-211ENST00000515022 CREBZFQ9NS37 354 aa11.8□□□□□ -0.52
TRIM6-211ENST00000515022 ATG3Q9NT62 314 aa11.8□□□□□ -0.52
TRIM6-211ENST00000515022 KDM2BQ8NHM5 1336 aa11.8□□□□□ -0.52
TRIM6-211ENST00000515022 INSRP06213 1382 aa11.79□□□□□ -0.52
TRIM6-211ENST00000515022 GYS1P13807 737 aa11.79□□□□□ -0.52
TRIM6-211ENST00000515022 CHRNA5P30532 468 aa11.79□□□□□ -0.52
TRIM6-211ENST00000515022 NLGN1Q8N2Q7 840 aa11.79□□□□□ -0.52
TRIM6-211ENST00000515022 SLC4A9Q96Q91 983 aa11.79□□□□□ -0.52
TRIM6-211ENST00000515022 EMILIN1Q9Y6C2 1016 aa11.79□□□□□ -0.52
TRIM6-211ENST00000515022 PARP3Q9Y6F1 533 aa11.79□□□□□ -0.52
TRIM6-211ENST00000515022 MYH14Q7Z406 1995 aaKnown RBP11.79□□□□□ -0.52
TRIM6-211ENST00000515022 PLEKHG2Q9H7P9 1386 aa11.79□□□□□ -0.52
TRIM6-211ENST00000515022 NKX1-1Q15270 411 aaPredicted RBP11.78□□□□□ -0.52
TRIM6-211ENST00000515022 DALRD3Q5D0E6 543 aaKnown RBP11.78□□□□□ -0.52
TRIM6-211ENST00000515022 SMC1BQ8NDV3 1235 aa11.78□□□□□ -0.52
TRIM6-211ENST00000515022 DCAF5Q96JK2 942 aa11.78□□□□□ -0.52
TRIM6-211ENST00000515022 PIM2Q9P1W9 311 aa11.78□□□□□ -0.52
TRIM6-211ENST00000515022 SRP68Q9UHB9 627 aaKnown RBP11.78□□□□□ -0.52
TRIM6-211ENST00000515022 RTCBQ9Y3I0 505 aaKnown RBP11.78□□□□□ -0.52
TRIM6-211ENST00000515022 PPM1GO15355 546 aaPredicted RBP11.77□□□□□ -0.53
TRIM6-211ENST00000515022 RASSF7Q02833 373 aa11.77□□□□□ -0.53
TRIM6-211ENST00000515022 TESK2Q96S53 571 aa11.77□□□□□ -0.53
TRIM6-211ENST00000515022 ZBTB47Q9UFB7 747 aaPredicted RBP11.77□□□□□ -0.53
TRIM6-211ENST00000515022 TNRC6CQ9HCJ0 1690 aaKnown RBP11.77□□□□□ -0.53
TRIM6-211ENST00000515022 FLT4P35916 1363 aa11.77□□□□□ -0.53
TRIM6-211ENST00000515022 ST20-MTHFSA0A0A6YYL1 179 aa11.76□□□□□ -0.53
TRIM6-211ENST00000515022 RFC4P35249 363 aa11.76□□□□□ -0.53
TRIM6-211ENST00000515022 CHADLQ6NUI6 762 aa11.76□□□□□ -0.53
TRIM6-211ENST00000515022 SPG7Q9UQ90 795 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms