RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 ZNF771Q7L3S4 317 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-219ENST00000514743 SMC4Q9NTJ3 1288 aa9.17□□□□□ -0.94
PDLIM5-219ENST00000514743 RNF217Q8TC41 542 aa9.17□□□□□ -0.94
PDLIM5-219ENST00000514743 ESF1Q9H501 851 aaKnown RBP9.17□□□□□ -0.94
PDLIM5-219ENST00000514743 UQCRHLA0A096LP55 91 aa9.16□□□□□ -0.94
PDLIM5-219ENST00000514743 SEC24BO95487 1268 aa9.16□□□□□ -0.94
PDLIM5-219ENST00000514743 UQCRHP07919 91 aa9.16□□□□□ -0.94
PDLIM5-219ENST00000514743 HMOX1P09601 288 aa9.16□□□□□ -0.94
PDLIM5-219ENST00000514743 PIK3C2AO00443 1686 aa9.16□□□□□ -0.94
PDLIM5-219ENST00000514743 SSH2Q76I76 1423 aa9.16□□□□□ -0.94
PDLIM5-219ENST00000514743 NFE2L2Q16236 605 aa9.16□□□□□ -0.94
PDLIM5-219ENST00000514743 ATF7IPQ6VMQ6 1270 aa9.16□□□□□ -0.94
PDLIM5-219ENST00000514743 NOB1Q9ULX3 412 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-219ENST00000514743 USP54Q70EL1 1684 aa9.16□□□□□ -0.94
PDLIM5-219ENST00000514743 PDZRN3Q9UPQ7 1066 aa9.16□□□□□ -0.94
PDLIM5-219ENST00000514743 R3HCC1Q9Y3T6 440 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-219ENST00000514743 DIP2AQ14689 1571 aa9.16□□□□□ -0.94
PDLIM5-219ENST00000514743 RRS1Q15050 365 aaKnown RBP9.15□□□□□ -0.94
PDLIM5-219ENST00000514743 CT47A1Q5JQC4 288 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-219ENST00000514743 USP6P35125 1406 aa9.15□□□□□ -0.94
PDLIM5-219ENST00000514743 PTCH1Q13635 1447 aa9.15□□□□□ -0.94
PDLIM5-219ENST00000514743 OFD1O75665 1012 aa9.15□□□□□ -0.94
PDLIM5-219ENST00000514743 ZNF853P0CG23 659 aa9.15□□□□□ -0.94
PDLIM5-219ENST00000514743 HDGFP51858 240 aaKnown RBP9.15□□□□□ -0.94
PDLIM5-219ENST00000514743 NBPF9Q3BBW0 867 aa9.15□□□□□ -0.94
PDLIM5-219ENST00000514743 ZNF513Q8N8E2 541 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-219ENST00000514743 ZNF428Q96B54 188 aa9.15□□□□□ -0.94
PDLIM5-219ENST00000514743 CEP83Q9Y592 693 aa9.15□□□□□ -0.94
PDLIM5-219ENST00000514743 BRPF1P55201 1214 aaPredicted RBP9.15□□□□□ -0.95
PDLIM5-219ENST00000514743 ALDH1L2Q3SY69 923 aa9.15□□□□□ -0.95
PDLIM5-219ENST00000514743 THUMPD2Q9BTF0 503 aaKnown RBP9.15□□□□□ -0.95
PDLIM5-219ENST00000514743 TMEM57Q8N5G2 664 aa9.14□□□□□ -0.95
PDLIM5-219ENST00000514743 COG3Q96JB2 828 aa9.14□□□□□ -0.95
PDLIM5-219ENST00000514743 PIK3R4Q99570 1358 aa9.14□□□□□ -0.95
PDLIM5-219ENST00000514743 KIF16BQ96L93 1317 aa9.14□□□□□ -0.95
PDLIM5-219ENST00000514743 DYNC1I1O14576 645 aa9.13□□□□□ -0.95
PDLIM5-219ENST00000514743 HOXD11P31277 338 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-219ENST00000514743 CEBPAP49715 358 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-219ENST00000514743 HDAC1Q13547 482 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-219ENST00000514743 MYCBPQ99417 103 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-219ENST00000514743 RWDD1Q9H446 243 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-219ENST00000514743 USP31Q70CQ4 1352 aa9.13□□□□□ -0.95
PDLIM5-219ENST00000514743 TTC21BQ7Z4L5 1316 aa9.13□□□□□ -0.95
PDLIM5-219ENST00000514743 KDM4AO75164 1064 aa9.13□□□□□ -0.95
PDLIM5-219ENST00000514743 TNNT3P45378 269 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-219ENST00000514743 ZBTB40Q9NUA8 1239 aa9.13□□□□□ -0.95
PDLIM5-219ENST00000514743 DDX19BQ9UMR2 479 aa9.13□□□□□ -0.95
PDLIM5-219ENST00000514743 ACEP12821 1306 aa9.13□□□□□ -0.95
PDLIM5-219ENST00000514743 PLEKHG3A1L390 1219 aa9.13□□□□□ -0.95
PDLIM5-219ENST00000514743 VAMP4O75379 141 aa9.13□□□□□ -0.95
PDLIM5-219ENST00000514743 TMTC2Q8N394 836 aa9.13□□□□□ -0.95
PDLIM5-219ENST00000514743 TSPYL6Q8N831 410 aa9.13□□□□□ -0.95
PDLIM5-219ENST00000514743 ITPRIPQ8IWB1 547 aa9.12□□□□□ -0.95
PDLIM5-219ENST00000514743 TSPYL1Q9H0U9 437 aa9.12□□□□□ -0.95
PDLIM5-219ENST00000514743 MBIPQ9NS73 344 aa9.12□□□□□ -0.95
PDLIM5-219ENST00000514743 IFT57Q9NWB7 429 aa9.12□□□□□ -0.95
PDLIM5-219ENST00000514743 SSR1P43307 286 aaKnown RBP9.12□□□□□ -0.95
PDLIM5-219ENST00000514743 MKRN4PQ13434 485 aaPredicted RBP9.12□□□□□ -0.95
PDLIM5-219ENST00000514743 MRPL50Q8N5N7 158 aaKnown RBP9.12□□□□□ -0.95
PDLIM5-219ENST00000514743 TIGD1Q96MW7 591 aa9.12□□□□□ -0.95
PDLIM5-219ENST00000514743 LRRC37A3O60309 1634 aa9.11□□□□□ -0.95
PDLIM5-219ENST00000514743 FAM83GA6ND36 823 aa9.11□□□□□ -0.95
PDLIM5-219ENST00000514743 EIF4A2Q14240 407 aaKnown RBP9.11□□□□□ -0.95
PDLIM5-219ENST00000514743 OTUD6BQ8N6M0 293 aa9.11□□□□□ -0.95
PDLIM5-219ENST00000514743 CCDC66A2RUB6 948 aa9.11□□□□□ -0.95
PDLIM5-219ENST00000514743 SMC5Q8IY18 1101 aa9.11□□□□□ -0.95
PDLIM5-219ENST00000514743 EFCC1Q9HA90 598 aa9.11□□□□□ -0.95
PDLIM5-219ENST00000514743 RAI14Q9P0K7 980 aa9.11□□□□□ -0.95
PDLIM5-219ENST00000514743 CHD2O14647 1828 aaKnown RBP9.11□□□□□ -0.95
PDLIM5-219ENST00000514743 CASC1Q6TDU7 716 aa9.1□□□□□ -0.95
PDLIM5-219ENST00000514743 ARMCX6Q7L4S7 300 aa9.1□□□□□ -0.95
PDLIM5-219ENST00000514743 SLC26A8Q96RN1 970 aa9.1□□□□□ -0.95
PDLIM5-219ENST00000514743 CCDC172P0C7W6 258 aa9.1□□□□□ -0.95
PDLIM5-219ENST00000514743 GNAI1P63096 354 aa9.1□□□□□ -0.95
PDLIM5-219ENST00000514743 NBPF6Q5VWK0 638 aa9.1□□□□□ -0.95
PDLIM5-219ENST00000514743 NBPF5PQ86XG9 351 aaPredicted RBP9.1□□□□□ -0.95
PDLIM5-219ENST00000514743 NBPF4Q96M43 638 aa9.1□□□□□ -0.95
PDLIM5-219ENST00000514743 DNAJC5Q9H3Z4 198 aa9.1□□□□□ -0.95
PDLIM5-219ENST00000514743 CEP170BQ9Y4F5 1589 aaPredicted RBP9.1□□□□□ -0.95
PDLIM5-219ENST00000514743 CALR3Q96L12 384 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-219ENST00000514743 ZNF142P52746 1687 aaPredicted RBP9.1□□□□□ -0.95
PDLIM5-219ENST00000514743 ABCC4O15439 1325 aa9.1□□□□□ -0.95
PDLIM5-219ENST00000514743 GTF2A1P52655 376 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-219ENST00000514743 LTN1O94822 1766 aa9.09□□□□□ -0.95
PDLIM5-219ENST00000514743 NUTM2FA1L443 756 aa9.09□□□□□ -0.95
PDLIM5-219ENST00000514743 TNNT1P13805 278 aa9.09□□□□□ -0.95
PDLIM5-219ENST00000514743 CAPN2P17655 700 aa9.09□□□□□ -0.95
PDLIM5-219ENST00000514743 C8orf58Q8NAV2 365 aa9.09□□□□□ -0.95
PDLIM5-219ENST00000514743 RGS12O14924 1447 aa9.09□□□□□ -0.95
PDLIM5-219ENST00000514743 IPO8O15397 1037 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-219ENST00000514743 MRE11P49959 708 aa9.09□□□□□ -0.95
PDLIM5-219ENST00000514743 DCTN1Q14203 1278 aa9.09□□□□□ -0.95
PDLIM5-219ENST00000514743 FOXD4L6Q3SYB3 417 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-219ENST00000514743 NBPF10Q6P3W6 841 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-219ENST00000514743 FOXD4L3Q6VB84 417 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-219ENST00000514743 ARHGAP45Q92619 1136 aa9.09□□□□□ -0.95
PDLIM5-219ENST00000514743 NWD1Q149M9 1564 aa9.08□□□□□ -0.96
PDLIM5-219ENST00000514743 ZBTB7BO15156 539 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-219ENST00000514743 SGSM3Q96HU1 749 aa9.08□□□□□ -0.96
PDLIM5-219ENST00000514743 SLKQ9H2G2 1235 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms