RNA–Protein interactions for RNA: ENST00000514649.5

TNFRSF8-205, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,412 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-205ENST00000514649 HMMRO75330 724 aa22.09■■□□□ 1.13
TNFRSF8-205ENST00000514649 NAP1L2Q9ULW6 460 aaPredicted RBP22.09■■□□□ 1.13
TNFRSF8-205ENST00000514649 TXNDC2Q86VQ3 553 aa22.09■■□□□ 1.13
TNFRSF8-205ENST00000514649 CCDC61Q9Y6R9 512 aa22.09■■□□□ 1.13
TNFRSF8-205ENST00000514649 TSHZ3Q63HK5 1081 aa22.08■■□□□ 1.13
TNFRSF8-205ENST00000514649 SLC4A10Q6U841 1118 aa22.08■■□□□ 1.13
TNFRSF8-205ENST00000514649 MIS18AQ9NYP9 233 aa22.08■■□□□ 1.13
TNFRSF8-205ENST00000514649 FAM13BQ9NYF5 915 aa22.08■■□□□ 1.12
TNFRSF8-205ENST00000514649 F6X3S4 739 aa22.07■■□□□ 1.12
TNFRSF8-205ENST00000514649 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.07■■□□□ 1.12
TNFRSF8-205ENST00000514649 ZKSCAN5Q9Y2L8 839 aa22.07■■□□□ 1.12
TNFRSF8-205ENST00000514649 CSPP1Q1MSJ5 1256 aa22.07■■□□□ 1.12
TNFRSF8-205ENST00000514649 G2E3Q7L622 706 aa22.07■■□□□ 1.12
TNFRSF8-205ENST00000514649 HOMEZQ8IX15 550 aa22.07■■□□□ 1.12
TNFRSF8-205ENST00000514649 DYNC1I1O14576 645 aa22.06■■□□□ 1.12
TNFRSF8-205ENST00000514649 MCM5P33992 734 aa22.06■■□□□ 1.12
TNFRSF8-205ENST00000514649 EXOC6BQ9Y2D4 811 aa22.06■■□□□ 1.12
TNFRSF8-205ENST00000514649 TNRQ92752 1358 aa22.06■■□□□ 1.12
TNFRSF8-205ENST00000514649 BRD1O95696 1058 aa22.05■■□□□ 1.12
TNFRSF8-205ENST00000514649 RNF214Q8ND24 703 aa22.05■■□□□ 1.12
TNFRSF8-205ENST00000514649 MBD3O95983 291 aa22.05■■□□□ 1.12
TNFRSF8-205ENST00000514649 ESYT1Q9BSJ8 1104 aa22.05■■□□□ 1.12
TNFRSF8-205ENST00000514649 PALD1Q9ULE6 856 aa22.05■■□□□ 1.12
TNFRSF8-205ENST00000514649 A2ML1A8K2U0 1454 aa22.04■■□□□ 1.12
TNFRSF8-205ENST00000514649 MCM2P49736 904 aa22.04■■□□□ 1.12
TNFRSF8-205ENST00000514649 NOL8Q76FK4 1167 aaKnown RBP22.04■■□□□ 1.12
TNFRSF8-205ENST00000514649 SETD1AO15047 1707 aaKnown RBP22.03■■□□□ 1.12
TNFRSF8-205ENST00000514649 UQCRHLA0A096LP55 91 aa22.03■■□□□ 1.12
TNFRSF8-205ENST00000514649 UQCRHP07919 91 aa22.03■■□□□ 1.12
TNFRSF8-205ENST00000514649 CUL4AQ13619 759 aa22.03■■□□□ 1.12
TNFRSF8-205ENST00000514649 METP08581 1390 aa22.03■■□□□ 1.12
TNFRSF8-205ENST00000514649 PAXIP1Q6ZW49 1069 aaPredicted RBP22.02■■□□□ 1.12
TNFRSF8-205ENST00000514649 CCDC39Q9UFE4 941 aa22.02■■□□□ 1.12
TNFRSF8-205ENST00000514649 CCT4P50991 539 aaKnown RBP22.01■■□□□ 1.11
TNFRSF8-205ENST00000514649 HSP90AB2PQ58FF8 381 aa22.01■■□□□ 1.11
TNFRSF8-205ENST00000514649 MON2Q7Z3U7 1717 aa22.01■■□□□ 1.11
TNFRSF8-205ENST00000514649 SALL3Q9BXA9 1300 aa22.01■■□□□ 1.11
TNFRSF8-205ENST00000514649 CRB1P82279 1406 aa22.01■■□□□ 1.11
TNFRSF8-205ENST00000514649 GNAI2P04899 355 aa22■■□□□ 1.11
TNFRSF8-205ENST00000514649 IPO4Q8TEX9 1081 aaKnown RBP22■■□□□ 1.11
TNFRSF8-205ENST00000514649 ANO2Q9NQ90 1003 aa22■■□□□ 1.11
TNFRSF8-205ENST00000514649 MCCP23508 829 aa21.99■■□□□ 1.11
TNFRSF8-205ENST00000514649 RILPL2Q969X0 211 aa21.99■■□□□ 1.11
TNFRSF8-205ENST00000514649 LRRCC1Q9C099 1032 aa21.99■■□□□ 1.11
TNFRSF8-205ENST00000514649 FOXO3O43524 673 aa21.99■■□□□ 1.11
TNFRSF8-205ENST00000514649 CHMLP26374 656 aa21.99■■□□□ 1.11
TNFRSF8-205ENST00000514649 FOXD4L6Q3SYB3 417 aaPredicted RBP21.99■■□□□ 1.11
TNFRSF8-205ENST00000514649 FOXD4L3Q6VB84 417 aaPredicted RBP21.99■■□□□ 1.11
TNFRSF8-205ENST00000514649 INTS4Q96HW7 963 aaKnown RBP21.99■■□□□ 1.11
TNFRSF8-205ENST00000514649 PRR36Q9H6K5 1346 aa21.99■■□□□ 1.11
TNFRSF8-205ENST00000514649 TRIM6-TRIM34B2RNG4 842 aa21.98■■□□□ 1.11
TNFRSF8-205ENST00000514649 MX1P20591 662 aa21.98■■□□□ 1.11
TNFRSF8-205ENST00000514649 TSPY26PQ9H489 355 aa21.98■■□□□ 1.11
TNFRSF8-205ENST00000514649 TSPYL4Q9UJ04 414 aa21.98■■□□□ 1.11
TNFRSF8-205ENST00000514649 NRKQ7Z2Y5 1582 aa21.98■■□□□ 1.11
TNFRSF8-205ENST00000514649 UBR1Q8IWV7 1749 aa21.97■■□□□ 1.11
TNFRSF8-205ENST00000514649 ANAPC15P60006 121 aa21.97■■□□□ 1.11
TNFRSF8-205ENST00000514649 PNMA6EA0A0J9YXQ4 647 aa21.97■■□□□ 1.11
TNFRSF8-205ENST00000514649 UPF3BQ9BZI7 483 aaKnown RBP21.97■■□□□ 1.11
TNFRSF8-205ENST00000514649 GDPD2Q9HCC8 539 aa21.97■■□□□ 1.11
TNFRSF8-205ENST00000514649 GADD45BO75293 160 aaPredicted RBP21.96■■□□□ 1.11
TNFRSF8-205ENST00000514649 SASS6Q6UVJ0 657 aa21.96■■□□□ 1.11
TNFRSF8-205ENST00000514649 UTP14CQ5TAP6 766 aaKnown RBP21.96■■□□□ 1.11
TNFRSF8-205ENST00000514649 BBXQ8WY36 941 aaPredicted RBP21.96■■□□□ 1.11
TNFRSF8-205ENST00000514649 TTC21BQ7Z4L5 1316 aa21.95■■□□□ 1.1
TNFRSF8-205ENST00000514649 AKAP12Q02952 1782 aa21.95■■□□□ 1.1
TNFRSF8-205ENST00000514649 MTHFSDQ2M296 383 aaKnown RBP21.95■■□□□ 1.1
TNFRSF8-205ENST00000514649 UNC5CLQ8IV45 518 aa21.95■■□□□ 1.1
TNFRSF8-205ENST00000514649 SOX12O15370 315 aa21.94■■□□□ 1.1
TNFRSF8-205ENST00000514649 SYAP1Q96A49 352 aaPredicted RBP21.94■■□□□ 1.1
TNFRSF8-205ENST00000514649 ATP8B2P98198 1209 aa21.94■■□□□ 1.1
TNFRSF8-205ENST00000514649 RTF1Q92541 710 aaKnown RBP21.94■■□□□ 1.1
TNFRSF8-205ENST00000514649 PTMAP06454 111 aaKnown RBP21.93■■□□□ 1.1
TNFRSF8-205ENST00000514649 USP48Q86UV5 1035 aa21.93■■□□□ 1.1
TNFRSF8-205ENST00000514649 NRXN3Q9Y4C0 1643 aa21.93■■□□□ 1.1
TNFRSF8-205ENST00000514649 ITSN1Q15811 1721 aa21.93■■□□□ 1.1
TNFRSF8-205ENST00000514649 TUBGCP6Q96RT7 1819 aa21.92■■□□□ 1.1
TNFRSF8-205ENST00000514649 STK31Q9BXU1 1019 aa21.91■■□□□ 1.1
TNFRSF8-205ENST00000514649 IL25Q9H293 177 aa21.91■■□□□ 1.1
TNFRSF8-205ENST00000514649 STAP2Q9UGK3 403 aa21.91■■□□□ 1.1
TNFRSF8-205ENST00000514649 MAP3K19Q56UN5 1328 aa21.91■■□□□ 1.1
TNFRSF8-205ENST00000514649 GNAI3P08754 354 aa21.91■■□□□ 1.1
TNFRSF8-205ENST00000514649 CCDC94Q9BW85 323 aaPredicted RBP21.91■■□□□ 1.1
TNFRSF8-205ENST00000514649 CHMP4AQ9BY43 222 aa21.91■■□□□ 1.1
TNFRSF8-205ENST00000514649 KDM4FA0A1W2PPD8 638 aa21.9■■□□□ 1.1
TNFRSF8-205ENST00000514649 NUTM2FA1L443 756 aa21.9■■□□□ 1.1
TNFRSF8-205ENST00000514649 FKBP5Q13451 457 aaPredicted RBP21.9■■□□□ 1.1
TNFRSF8-205ENST00000514649 SIRT1Q96EB6 747 aa21.9■■□□□ 1.1
TNFRSF8-205ENST00000514649 IL17RAQ96F46 866 aa21.9■■□□□ 1.1
TNFRSF8-205ENST00000514649 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.9■■□□□ 1.1
TNFRSF8-205ENST00000514649 ACEP12821 1306 aa21.9■■□□□ 1.1
TNFRSF8-205ENST00000514649 FLIIQ13045 1269 aa21.9■■□□□ 1.1
TNFRSF8-205ENST00000514649 WDR33Q9C0J8 1336 aaKnown RBP21.89■■□□□ 1.1
TNFRSF8-205ENST00000514649 PEAK1Q9H792 1746 aa21.89■■□□□ 1.09
TNFRSF8-205ENST00000514649 SSH2Q76I76 1423 aa21.89■■□□□ 1.09
TNFRSF8-205ENST00000514649 NECTIN2Q92692 538 aa21.89■■□□□ 1.09
TNFRSF8-205ENST00000514649 SRCIN1Q9C0H9 1055 aa21.89■■□□□ 1.09
TNFRSF8-205ENST00000514649 TCHHQ07283 1943 aa21.88■■□□□ 1.09
TNFRSF8-205ENST00000514649 PHF14O94880 888 aa21.88■■□□□ 1.09
TNFRSF8-205ENST00000514649 GTF2E1P29083 439 aaPredicted RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms