RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 EPHA4P54764 986 aa9.54□□□□□ -0.88
HMGCS1-207ENST00000514610 TNS4Q8IZW8 715 aa9.54□□□□□ -0.88
HMGCS1-207ENST00000514610 ZNF395Q9H8N7 513 aaPredicted RBP9.54□□□□□ -0.88
HMGCS1-207ENST00000514610 HRH3Q9Y5N1 445 aa9.54□□□□□ -0.88
HMGCS1-207ENST00000514610 PRMT3O60678 531 aa9.53□□□□□ -0.88
HMGCS1-207ENST00000514610 CLN3Q13286 438 aa9.53□□□□□ -0.88
HMGCS1-207ENST00000514610 OCLNQ16625 522 aa9.53□□□□□ -0.88
HMGCS1-207ENST00000514610 GAS2L2Q8NHY3 880 aa9.53□□□□□ -0.88
HMGCS1-207ENST00000514610 CNKSR1Q969H4 720 aa9.53□□□□□ -0.88
HMGCS1-207ENST00000514610 PRIMPOLQ96LW4 560 aa9.53□□□□□ -0.88
HMGCS1-207ENST00000514610 SLC4A9Q96Q91 983 aa9.53□□□□□ -0.88
HMGCS1-207ENST00000514610 SSFA2P28290 1259 aa9.52□□□□□ -0.89
HMGCS1-207ENST00000514610 TRIM26Q12899 539 aaPredicted RBP9.52□□□□□ -0.89
HMGCS1-207ENST00000514610 ESCO1Q5FWF5 840 aa9.52□□□□□ -0.89
HMGCS1-207ENST00000514610 HINFPQ9BQA5 517 aa9.52□□□□□ -0.89
HMGCS1-207ENST00000514610 ESYT1Q9BSJ8 1104 aa9.52□□□□□ -0.89
HMGCS1-207ENST00000514610 BACH1O14867 736 aa9.51□□□□□ -0.89
HMGCS1-207ENST00000514610 BRD1O95696 1058 aa9.51□□□□□ -0.89
HMGCS1-207ENST00000514610 ATP2B4P23634 1241 aa9.51□□□□□ -0.89
HMGCS1-207ENST00000514610 AEBP1Q8IUX7 1158 aa9.51□□□□□ -0.89
HMGCS1-207ENST00000514610 USP3Q9Y6I4 520 aa9.51□□□□□ -0.89
HMGCS1-207ENST00000514610 MEN1O00255 615 aa9.5□□□□□ -0.89
HMGCS1-207ENST00000514610 DGAT1O75907 488 aa9.5□□□□□ -0.89
HMGCS1-207ENST00000514610 WEE1P30291 646 aa9.5□□□□□ -0.89
HMGCS1-207ENST00000514610 SCNN1AP37088 669 aa9.5□□□□□ -0.89
HMGCS1-207ENST00000514610 SMTNP53814 917 aa9.5□□□□□ -0.89
HMGCS1-207ENST00000514610 FOXK2Q01167 660 aa9.5□□□□□ -0.89
HMGCS1-207ENST00000514610 LINC00528Q8N1L1 170 aa9.5□□□□□ -0.89
HMGCS1-207ENST00000514610 PURBQ96QR8 312 aaKnown RBP9.5□□□□□ -0.89
HMGCS1-207ENST00000514610 FHDC1Q9C0D6 1143 aaPredicted RBP9.5□□□□□ -0.89
HMGCS1-207ENST00000514610 A6NJY4 79 aa9.49□□□□□ -0.89
HMGCS1-207ENST00000514610 C21orf2O43822 256 aa9.49□□□□□ -0.89
HMGCS1-207ENST00000514610 MTFR1Q15390 333 aa9.49□□□□□ -0.89
HMGCS1-207ENST00000514610 TBCELQ5QJ74 424 aa9.49□□□□□ -0.89
HMGCS1-207ENST00000514610 INSM2Q96T92 566 aaPredicted RBP9.49□□□□□ -0.89
HMGCS1-207ENST00000514610 TSEN34Q9BSV6 310 aaKnown RBP9.49□□□□□ -0.89
HMGCS1-207ENST00000514610 TSPAN10Q9H1Z9 355 aaPredicted RBP9.49□□□□□ -0.89
HMGCS1-207ENST00000514610 CXXC1Q9P0U4 656 aaPredicted RBP9.49□□□□□ -0.89
HMGCS1-207ENST00000514610 SCHIP1Q9P0W5 487 aaPredicted RBP9.49□□□□□ -0.89
HMGCS1-207ENST00000514610 SPINT1O43278 529 aa9.48□□□□□ -0.89
HMGCS1-207ENST00000514610 BMP1P13497 986 aa9.48□□□□□ -0.89
HMGCS1-207ENST00000514610 CENPCQ03188 943 aa9.48□□□□□ -0.89
HMGCS1-207ENST00000514610 TLR1Q15399 786 aa9.48□□□□□ -0.89
HMGCS1-207ENST00000514610 PKDCCQ504Y2 493 aa9.48□□□□□ -0.89
HMGCS1-207ENST00000514610 KCTD17Q8N5Z5 321 aa9.48□□□□□ -0.89
HMGCS1-207ENST00000514610 IQSEC3Q9UPP2 1182 aaPredicted RBP9.48□□□□□ -0.89
HMGCS1-207ENST00000514610 SMCPP49901 116 aaPredicted RBP9.47□□□□□ -0.89
HMGCS1-207ENST00000514610 MRPL14Q6P1L8 145 aaKnown RBP9.47□□□□□ -0.89
HMGCS1-207ENST00000514610 TRIM46Q7Z4K8 759 aa9.47□□□□□ -0.89
HMGCS1-207ENST00000514610 SLC9A9Q8IVB4 645 aa9.47□□□□□ -0.89
HMGCS1-207ENST00000514610 SCG3Q8WXD2 468 aaKnown RBP9.47□□□□□ -0.89
HMGCS1-207ENST00000514610 CTSOP43234 321 aaPredicted RBP9.46□□□□□ -0.9
HMGCS1-207ENST00000514610 FKBP5Q13451 457 aaPredicted RBP9.46□□□□□ -0.9
HMGCS1-207ENST00000514610 C6orf118Q5T5N4 469 aa9.46□□□□□ -0.9
HMGCS1-207ENST00000514610 FOXD4L5Q5VV16 416 aaPredicted RBP9.46□□□□□ -0.9
HMGCS1-207ENST00000514610 ZNF295-AS1Q8N0V1 137 aa9.46□□□□□ -0.9
HMGCS1-207ENST00000514610 NLRP3Q96P20 1036 aa9.46□□□□□ -0.9
HMGCS1-207ENST00000514610 IGFBP4P22692 258 aa9.45□□□□□ -0.9
HMGCS1-207ENST00000514610 KCNA1Q09470 495 aa9.45□□□□□ -0.9
HMGCS1-207ENST00000514610 CTC1Q2NKJ3 1217 aa9.45□□□□□ -0.9
HMGCS1-207ENST00000514610 ZNF787Q6DD87 383 aa9.45□□□□□ -0.9
HMGCS1-207ENST00000514610 CAPN12Q6ZSI9 719 aa9.45□□□□□ -0.9
HMGCS1-207ENST00000514610 ATAD2Q6PL18 1390 aa9.45□□□□□ -0.9
HMGCS1-207ENST00000514610 CDK2AP1O14519 115 aa9.44□□□□□ -0.9
HMGCS1-207ENST00000514610 ST8SIA5O15466 376 aa9.44□□□□□ -0.9
HMGCS1-207ENST00000514610 BMP2P12643 396 aa9.44□□□□□ -0.9
HMGCS1-207ENST00000514610 B4GALNT3Q6L9W6 998 aa9.44□□□□□ -0.9
HMGCS1-207ENST00000514610 TAS1R3Q7RTX0 852 aa9.44□□□□□ -0.9
HMGCS1-207ENST00000514610 CRIPAKQ8N1N5 446 aa9.44□□□□□ -0.9
HMGCS1-207ENST00000514610 C1orf216Q8TAB5 229 aa9.44□□□□□ -0.9
HMGCS1-207ENST00000514610 GRIP2Q9C0E4 1043 aa9.44□□□□□ -0.9
HMGCS1-207ENST00000514610 AXIN1O15169 862 aa9.43□□□□□ -0.9
HMGCS1-207ENST00000514610 UPP2O95045 317 aa9.43□□□□□ -0.9
HMGCS1-207ENST00000514610 RNF144AP50876 292 aaPredicted RBP9.43□□□□□ -0.9
HMGCS1-207ENST00000514610 TXNDC2Q86VQ3 553 aa9.43□□□□□ -0.9
HMGCS1-207ENST00000514610 POLMQ9NP87 494 aaPredicted RBP9.43□□□□□ -0.9
HMGCS1-207ENST00000514610 PPP1R12BO60237 982 aaPredicted RBP9.42□□□□□ -0.9
HMGCS1-207ENST00000514610 GPC1P35052 558 aa9.42□□□□□ -0.9
HMGCS1-207ENST00000514610 PPARGC1BQ86YN6 1023 aaKnown RBP9.42□□□□□ -0.9
HMGCS1-207ENST00000514610 ZDHHC1Q8WTX9 485 aa9.42□□□□□ -0.9
HMGCS1-207ENST00000514610 ZSCAN10Q96SZ4 725 aaPredicted RBP9.42□□□□□ -0.9
HMGCS1-207ENST00000514610 MKNK1Q9BUB5 465 aa9.42□□□□□ -0.9
HMGCS1-207ENST00000514610 DACH1Q9UI36 760 aa9.42□□□□□ -0.9
HMGCS1-207ENST00000514610 IVNS1ABPQ9Y6Y0 642 aa9.42□□□□□ -0.9
HMGCS1-207ENST00000514610 SH3PXD2AQ5TCZ1 1133 aa9.41□□□□□ -0.9
HMGCS1-207ENST00000514610 RNF217Q8TC41 542 aa9.41□□□□□ -0.9
HMGCS1-207ENST00000514610 CHMP7Q8WUX9 453 aaPredicted RBP9.41□□□□□ -0.9
HMGCS1-207ENST00000514610 AAASQ9NRG9 546 aa9.41□□□□□ -0.9
HMGCS1-207ENST00000514610 SEPT3Q9UH03 358 aa9.41□□□□□ -0.9
HMGCS1-207ENST00000514610 GNEQ9Y223 722 aaKnown RBP9.41□□□□□ -0.9
HMGCS1-207ENST00000514610 ZBTB7CA1YPR0 619 aa9.4□□□□□ -0.9
HMGCS1-207ENST00000514610 FOXO3O43524 673 aa9.4□□□□□ -0.9
HMGCS1-207ENST00000514610 ZFP42Q96MM3 310 aa9.4□□□□□ -0.9
HMGCS1-207ENST00000514610 C2orf49Q9BVC5 232 aaPredicted RBP9.4□□□□□ -0.9
HMGCS1-207ENST00000514610 SOS2Q07890 1332 aaPredicted RBP9.39□□□□□ -0.91
HMGCS1-207ENST00000514610 PSMA6P60900 246 aaKnown RBP9.39□□□□□ -0.91
HMGCS1-207ENST00000514610 SLC27A3Q5K4L6 730 aa9.39□□□□□ -0.91
HMGCS1-207ENST00000514610 POTEAQ6S8J7 498 aa9.39□□□□□ -0.91
HMGCS1-207ENST00000514610 PARP3Q9Y6F1 533 aa9.39□□□□□ -0.91
HMGCS1-207ENST00000514610 EML1O00423 815 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms