RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 GRM5P41594 1212 aa8.44□□□□□ -1.06
RFC1-216ENST00000514572 GDF10P55107 478 aa8.44□□□□□ -1.06
RFC1-216ENST00000514572 FOXK2Q01167 660 aa8.44□□□□□ -1.06
RFC1-216ENST00000514572 RGL4Q8IZJ4 473 aa8.44□□□□□ -1.06
RFC1-216ENST00000514572 LILRA1O75019 489 aa8.43□□□□□ -1.06
RFC1-216ENST00000514572 INHAP05111 366 aa8.43□□□□□ -1.06
RFC1-216ENST00000514572 TNS4Q8IZW8 715 aa8.43□□□□□ -1.06
RFC1-216ENST00000514572 GAS2L2Q8NHY3 880 aa8.43□□□□□ -1.06
RFC1-216ENST00000514572 ETNK1Q9HBU6 452 aa8.43□□□□□ -1.06
RFC1-216ENST00000514572 ZBTB24O43167 697 aaPredicted RBP8.42□□□□□ -1.06
RFC1-216ENST00000514572 RPIAP49247 311 aa8.42□□□□□ -1.06
RFC1-216ENST00000514572 POTEAQ6S8J7 498 aa8.42□□□□□ -1.06
RFC1-216ENST00000514572 STAG2Q8N3U4 1231 aa8.42□□□□□ -1.06
RFC1-216ENST00000514572 ZNF784Q8NCA9 323 aaPredicted RBP8.42□□□□□ -1.06
RFC1-216ENST00000514572 TSPAN10Q9H1Z9 355 aaPredicted RBP8.42□□□□□ -1.06
RFC1-216ENST00000514572 TMPRSS4Q9NRS4 437 aa8.42□□□□□ -1.06
RFC1-216ENST00000514572 LOC105371045A0A1W2PR82 267 aa8.41□□□□□ -1.06
RFC1-216ENST00000514572 BACH1O14867 736 aa8.41□□□□□ -1.06
RFC1-216ENST00000514572 FSHRP23945 695 aa8.41□□□□□ -1.06
RFC1-216ENST00000514572 TAGLNQ01995 201 aaKnown RBP8.41□□□□□ -1.06
RFC1-216ENST00000514572 MTFR1Q15390 333 aa8.41□□□□□ -1.06
RFC1-216ENST00000514572 SCG3Q8WXD2 468 aaKnown RBP8.41□□□□□ -1.06
RFC1-216ENST00000514572 RBCK1Q9BYM8 510 aa8.41□□□□□ -1.06
RFC1-216ENST00000514572 CYLDQ9NQC7 956 aa8.41□□□□□ -1.06
RFC1-216ENST00000514572 ATAD2Q6PL18 1390 aa8.4□□□□□ -1.06
RFC1-216ENST00000514572 SIAH2O43255 324 aa8.4□□□□□ -1.06
RFC1-216ENST00000514572 DHX9Q08211 1270 aaKnown RBP8.4□□□□□ -1.06
RFC1-216ENST00000514572 ZNF326Q5BKZ1 582 aaKnown RBP8.4□□□□□ -1.06
RFC1-216ENST00000514572 ZSCAN29Q8IWY8 852 aaPredicted RBP8.4□□□□□ -1.06
RFC1-216ENST00000514572 SCHIP1Q9P0W5 487 aaPredicted RBP8.4□□□□□ -1.06
RFC1-216ENST00000514572 A0A1W2PRU2 124 aa8.39□□□□□ -1.07
RFC1-216ENST00000514572 FAM13AO94988 1023 aa8.39□□□□□ -1.07
RFC1-216ENST00000514572 IGHA2P01877 340 aa8.39□□□□□ -1.07
RFC1-216ENST00000514572 TCF3P15923 654 aa8.39□□□□□ -1.07
RFC1-216ENST00000514572 NAA30Q147X3 362 aaPredicted RBP8.39□□□□□ -1.07
RFC1-216ENST00000514572 RC3H1Q5TC82 1133 aaKnown RBP8.39□□□□□ -1.07
RFC1-216ENST00000514572 EHBP1Q8NDI1 1231 aa8.39□□□□□ -1.07
RFC1-216ENST00000514572 TNFRSF10BO14763 440 aa8.38□□□□□ -1.07
RFC1-216ENST00000514572 RECKO95980 971 aa8.38□□□□□ -1.07
RFC1-216ENST00000514572 ADH1CP00326 375 aa8.38□□□□□ -1.07
RFC1-216ENST00000514572 GNRH1P01148 92 aa8.38□□□□□ -1.07
RFC1-216ENST00000514572 MPSTP25325 297 aa8.38□□□□□ -1.07
RFC1-216ENST00000514572 TRIM52Q96A61 297 aa8.38□□□□□ -1.07
RFC1-216ENST00000514572 EMID1Q96A84 441 aaPredicted RBP8.38□□□□□ -1.07
RFC1-216ENST00000514572 C2orf49Q9BVC5 232 aaPredicted RBP8.38□□□□□ -1.07
RFC1-216ENST00000514572 IRX2Q9BZI1 471 aaPredicted RBP8.38□□□□□ -1.07
RFC1-216ENST00000514572 SAP130Q9H0E3 1048 aa8.38□□□□□ -1.07
RFC1-216ENST00000514572 TLL2Q9Y6L7 1015 aa8.38□□□□□ -1.07
RFC1-216ENST00000514572 FMR1Q06787 632 aaKnown RBP eCLIP8.37□□□□□ -1.07
RFC1-216ENST00000514572 PPP1R26Q5T8A7 1209 aaPredicted RBP8.37□□□□□ -1.07
RFC1-216ENST00000514572 C16orf46Q6P387 395 aa8.37□□□□□ -1.07
RFC1-216ENST00000514572 TMC7Q7Z402 723 aa8.37□□□□□ -1.07
RFC1-216ENST00000514572 CYP2U1Q7Z449 544 aa8.37□□□□□ -1.07
RFC1-216ENST00000514572 IQSEC3Q9UPP2 1182 aaPredicted RBP8.37□□□□□ -1.07
RFC1-216ENST00000514572 HRH3Q9Y5N1 445 aa8.37□□□□□ -1.07
RFC1-216ENST00000514572 A6NJY4 79 aa8.36□□□□□ -1.07
RFC1-216ENST00000514572 TREHO43280 583 aa8.36□□□□□ -1.07
RFC1-216ENST00000514572 P4HBP07237 508 aaKnown RBP8.36□□□□□ -1.07
RFC1-216ENST00000514572 ADD1P35611 737 aaKnown RBP8.36□□□□□ -1.07
RFC1-216ENST00000514572 NR5A1Q13285 461 aa8.36□□□□□ -1.07
RFC1-216ENST00000514572 SLC9A9Q8IVB4 645 aa8.36□□□□□ -1.07
RFC1-216ENST00000514572 CCDC116Q8IYX3 515 aa8.36□□□□□ -1.07
RFC1-216ENST00000514572 SERTAD1Q9UHV2 236 aa8.36□□□□□ -1.07
RFC1-216ENST00000514572 NR3C2P08235 984 aa8.35□□□□□ -1.07
RFC1-216ENST00000514572 GGCXP38435 758 aa8.35□□□□□ -1.07
RFC1-216ENST00000514572 SMTNP53814 917 aa8.35□□□□□ -1.07
RFC1-216ENST00000514572 MYT1Q01538 1121 aa8.35□□□□□ -1.07
RFC1-216ENST00000514572 ARID5BQ14865 1188 aa8.35□□□□□ -1.07
RFC1-216ENST00000514572 ZNF295-AS1Q8N0V1 137 aa8.35□□□□□ -1.07
RFC1-216ENST00000514572 MYO19Q96H55 970 aa8.35□□□□□ -1.07
RFC1-216ENST00000514572 CITED4Q96RK1 184 aa8.35□□□□□ -1.07
RFC1-216ENST00000514572 QTRT2Q9H974 415 aaKnown RBP8.35□□□□□ -1.07
RFC1-216ENST00000514572 PPP1R12BO60237 982 aaPredicted RBP8.34□□□□□ -1.07
RFC1-216ENST00000514572 FZD6O60353 706 aa8.34□□□□□ -1.07
RFC1-216ENST00000514572 IL2RAP01589 272 aa8.34□□□□□ -1.07
RFC1-216ENST00000514572 HIRAP54198 1017 aaPredicted RBP8.34□□□□□ -1.07
RFC1-216ENST00000514572 MRPL58Q14197 206 aaKnown RBP8.34□□□□□ -1.07
RFC1-216ENST00000514572 DSC3Q14574 896 aa8.34□□□□□ -1.07
RFC1-216ENST00000514572 EAPPQ56P03 285 aaPredicted RBP8.34□□□□□ -1.07
RFC1-216ENST00000514572 COX20Q5RI15 118 aa8.34□□□□□ -1.07
RFC1-216ENST00000514572 PPP1R18Q6NYC8 613 aa8.34□□□□□ -1.07
RFC1-216ENST00000514572 XAGE2Q96GT9 111 aa8.34□□□□□ -1.07
RFC1-216ENST00000514572 ESF1Q9H501 851 aaKnown RBP8.34□□□□□ -1.07
RFC1-216ENST00000514572 USP3Q9Y6I4 520 aa8.34□□□□□ -1.07
RFC1-216ENST00000514572 EIF1AXP47813 144 aaKnown RBP8.33□□□□□ -1.08
RFC1-216ENST00000514572 PSMA6P60900 246 aaKnown RBP8.33□□□□□ -1.08
RFC1-216ENST00000514572 ESCO1Q5FWF5 840 aa8.33□□□□□ -1.08
RFC1-216ENST00000514572 LIAT1Q6ZQX7 453 aa8.33□□□□□ -1.08
RFC1-216ENST00000514572 KDF1Q8NAX2 398 aaPredicted RBP8.33□□□□□ -1.08
RFC1-216ENST00000514572 FAM129BQ96TA1 746 aa8.33□□□□□ -1.08
RFC1-216ENST00000514572 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.33□□□□□ -1.08
RFC1-216ENST00000514572 LRFN2Q9ULH4 789 aa8.33□□□□□ -1.08
RFC1-216ENST00000514572 WNT7AO00755 349 aa8.32□□□□□ -1.08
RFC1-216ENST00000514572 NDUFB5O43674 189 aa8.32□□□□□ -1.08
RFC1-216ENST00000514572 CD2BP2O95400 341 aaKnown RBP8.32□□□□□ -1.08
RFC1-216ENST00000514572 FAM26DQ5JW98 314 aa8.32□□□□□ -1.08
RFC1-216ENST00000514572 TBCELQ5QJ74 424 aa8.32□□□□□ -1.08
RFC1-216ENST00000514572 ARHGEF10LQ9HCE6 1279 aa8.32□□□□□ -1.08
RFC1-216ENST00000514572 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.32□□□□□ -1.08
RFC1-216ENST00000514572 STIM2Q9P246 746 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms