RNA–Protein interactions for RNA: ENST00000514517.1

PPARGC1A-214, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 3

Gene PPARGC1A, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-214ENST00000514517 PKD1L3Q7Z443 1732 aa13□□□□□ -0.33
PPARGC1A-214ENST00000514517 CHL1O00533 1208 aa13□□□□□ -0.33
PPARGC1A-214ENST00000514517 ZNF853P0CG23 659 aa13□□□□□ -0.33
PPARGC1A-214ENST00000514517 PIGBQ92521 554 aa13□□□□□ -0.33
PPARGC1A-214ENST00000514517 LRRC37A3O60309 1634 aa12.99□□□□□ -0.33
PPARGC1A-214ENST00000514517 SLFN5Q08AF3 891 aa12.99□□□□□ -0.33
PPARGC1A-214ENST00000514517 BCL11BQ9C0K0 894 aaPredicted RBP12.99□□□□□ -0.33
PPARGC1A-214ENST00000514517 MIS18AQ9NYP9 233 aa12.99□□□□□ -0.33
PPARGC1A-214ENST00000514517 KCNQ2O43526 872 aa12.98□□□□□ -0.33
PPARGC1A-214ENST00000514517 TTC5Q8N0Z6 440 aa12.98□□□□□ -0.33
PPARGC1A-214ENST00000514517 CDCA7LQ96GN5 454 aa12.98□□□□□ -0.33
PPARGC1A-214ENST00000514517 MBIPQ9NS73 344 aa12.98□□□□□ -0.33
PPARGC1A-214ENST00000514517 ZNF790Q6PG37 636 aa12.97□□□□□ -0.33
PPARGC1A-214ENST00000514517 SMARCC1Q92922 1105 aaPredicted RBP12.97□□□□□ -0.33
PPARGC1A-214ENST00000514517 SPINK5Q9NQ38 1064 aaPredicted RBP12.97□□□□□ -0.33
PPARGC1A-214ENST00000514517 TRIM37O94972 964 aa12.96□□□□□ -0.33
PPARGC1A-214ENST00000514517 SLC39A6Q13433 755 aa12.96□□□□□ -0.33
PPARGC1A-214ENST00000514517 TRMT2AQ8IZ69 625 aaKnown RBP12.96□□□□□ -0.33
PPARGC1A-214ENST00000514517 TSR2Q969E8 191 aaKnown RBP12.96□□□□□ -0.33
PPARGC1A-214ENST00000514517 ATG3Q9NT62 314 aa12.96□□□□□ -0.33
PPARGC1A-214ENST00000514517 FANCIQ9NVI1 1328 aa12.95□□□□□ -0.34
PPARGC1A-214ENST00000514517 ASAP1Q9ULH1 1129 aa12.95□□□□□ -0.34
PPARGC1A-214ENST00000514517 WNK3Q9BYP7 1800 aa12.95□□□□□ -0.34
PPARGC1A-214ENST00000514517 MRC1P22897 1456 aa12.94□□□□□ -0.34
PPARGC1A-214ENST00000514517 KCNQ3O43525 872 aa12.94□□□□□ -0.34
PPARGC1A-214ENST00000514517 EIF4A1P60842 406 aaKnown RBP12.94□□□□□ -0.34
PPARGC1A-214ENST00000514517 DUSP27Q5VZP5 1158 aa12.94□□□□□ -0.34
PPARGC1A-214ENST00000514517 FMNL2Q96PY5 1086 aa12.94□□□□□ -0.34
PPARGC1A-214ENST00000514517 PTCD1O75127 700 aaKnown RBP12.93□□□□□ -0.34
PPARGC1A-214ENST00000514517 PTF1AQ7RTS3 328 aa12.93□□□□□ -0.34
PPARGC1A-214ENST00000514517 CHMP4AQ9BY43 222 aa12.93□□□□□ -0.34
PPARGC1A-214ENST00000514517 SNRPA1P09661 255 aaKnown RBP12.92□□□□□ -0.34
PPARGC1A-214ENST00000514517 EXOSC9Q06265 439 aaKnown RBP12.92□□□□□ -0.34
PPARGC1A-214ENST00000514517 SF3B2Q13435 895 aaKnown RBP12.92□□□□□ -0.34
PPARGC1A-214ENST00000514517 ZNF496Q96IT1 587 aaPredicted RBP12.92□□□□□ -0.34
PPARGC1A-214ENST00000514517 RBM42Q9BTD8 480 aaKnown RBP12.92□□□□□ -0.34
PPARGC1A-214ENST00000514517 SHANK3Q9BYB0 1731 aa12.91□□□□□ -0.34
PPARGC1A-214ENST00000514517 APBA3O96018 575 aa12.91□□□□□ -0.34
PPARGC1A-214ENST00000514517 CCDC125Q86Z20 511 aa12.91□□□□□ -0.34
PPARGC1A-214ENST00000514517 VSIG10Q8N0Z9 540 aa12.91□□□□□ -0.34
PPARGC1A-214ENST00000514517 TEX13AQ9BXU3 409 aaPredicted RBP12.91□□□□□ -0.34
PPARGC1A-214ENST00000514517 ADAMTS7Q9UKP4 1686 aa12.91□□□□□ -0.34
PPARGC1A-214ENST00000514517 SOS1Q07889 1333 aaPredicted RBP12.9□□□□□ -0.34
PPARGC1A-214ENST00000514517 LOC102724428A0A0B4J2F2 783 aa12.9□□□□□ -0.34
PPARGC1A-214ENST00000514517 ELL2O00472 640 aaPredicted RBP12.9□□□□□ -0.34
PPARGC1A-214ENST00000514517 GIGYF1O75420 1035 aaPredicted RBP12.9□□□□□ -0.34
PPARGC1A-214ENST00000514517 HOXB7P09629 217 aa12.9□□□□□ -0.34
PPARGC1A-214ENST00000514517 CT47B1P0C2W7 299 aaPredicted RBP12.9□□□□□ -0.34
PPARGC1A-214ENST00000514517 HMGB2P26583 209 aaKnown RBP12.9□□□□□ -0.34
PPARGC1A-214ENST00000514517 SIK1P57059 783 aa12.9□□□□□ -0.34
PPARGC1A-214ENST00000514517 C8orf58Q8NAV2 365 aa12.9□□□□□ -0.34
PPARGC1A-214ENST00000514517 PALLDQ8WX93 1383 aa12.9□□□□□ -0.34
PPARGC1A-214ENST00000514517 EP400Q96L91 3159 aa12.89□□□□□ -0.35
PPARGC1A-214ENST00000514517 PLSCR1O15162 318 aa12.89□□□□□ -0.35
PPARGC1A-214ENST00000514517 TWISTNBQ3B726 338 aaPredicted RBP12.89□□□□□ -0.35
PPARGC1A-214ENST00000514517 HEG1Q9ULI3 1381 aa12.89□□□□□ -0.35
PPARGC1A-214ENST00000514517 STARD3NLO95772 234 aa12.88□□□□□ -0.35
PPARGC1A-214ENST00000514517 ATP6V1AP38606 617 aa12.88□□□□□ -0.35
PPARGC1A-214ENST00000514517 KRT24Q2M2I5 525 aa12.88□□□□□ -0.35
PPARGC1A-214ENST00000514517 TSPYL6Q8N831 410 aa12.88□□□□□ -0.35
PPARGC1A-214ENST00000514517 ZNF428Q96B54 188 aa12.88□□□□□ -0.35
PPARGC1A-214ENST00000514517 VAMP4O75379 141 aa12.87□□□□□ -0.35
PPARGC1A-214ENST00000514517 CENPBP07199 599 aaPredicted RBP12.87□□□□□ -0.35
PPARGC1A-214ENST00000514517 BAG6P46379 1132 aa12.87□□□□□ -0.35
PPARGC1A-214ENST00000514517 SLC27A3Q5K4L6 730 aa12.87□□□□□ -0.35
PPARGC1A-214ENST00000514517 CCNL1Q9UK58 526 aaPredicted RBP12.87□□□□□ -0.35
PPARGC1A-214ENST00000514517 SCN11AQ9UI33 1791 aa12.86□□□□□ -0.35
PPARGC1A-214ENST00000514517 EIF2S2P20042 333 aaKnown RBP12.86□□□□□ -0.35
PPARGC1A-214ENST00000514517 HDGFL1Q5TGJ6 251 aa12.86□□□□□ -0.35
PPARGC1A-214ENST00000514517 CCDC30Q5VVM6 783 aa12.86□□□□□ -0.35
PPARGC1A-214ENST00000514517 DNAJC10Q8IXB1 793 aa12.86□□□□□ -0.35
PPARGC1A-214ENST00000514517 SLC4A9Q96Q91 983 aa12.86□□□□□ -0.35
PPARGC1A-214ENST00000514517 DLG5Q8TDM6 1919 aa12.86□□□□□ -0.35
PPARGC1A-214ENST00000514517 TOGARAM1Q9Y4F4 1720 aa12.85□□□□□ -0.35
PPARGC1A-214ENST00000514517 TXNRD1Q16881 649 aa12.85□□□□□ -0.35
PPARGC1A-214ENST00000514517 BRWD3Q6RI45 1802 aa12.84□□□□□ -0.35
PPARGC1A-214ENST00000514517 PRAMEF22A3QJZ6 481 aa12.84□□□□□ -0.35
PPARGC1A-214ENST00000514517 ITPK1Q13572 414 aa12.84□□□□□ -0.35
PPARGC1A-214ENST00000514517 STK31Q9BXU1 1019 aa12.84□□□□□ -0.35
PPARGC1A-214ENST00000514517 USP16Q9Y5T5 823 aa12.84□□□□□ -0.35
PPARGC1A-214ENST00000514517 DOT1LQ8TEK3 1739 aa12.84□□□□□ -0.35
PPARGC1A-214ENST00000514517 NHSQ6T4R5 1651 aa12.83□□□□□ -0.35
PPARGC1A-214ENST00000514517 KCPQ6ZWJ8 1503 aa12.83□□□□□ -0.35
PPARGC1A-214ENST00000514517 CYP19A1P11511 503 aaPredicted RBP12.83□□□□□ -0.36
PPARGC1A-214ENST00000514517 EN1Q05925 392 aaPredicted RBP12.83□□□□□ -0.36
PPARGC1A-214ENST00000514517 ALDH1L2Q3SY69 923 aa12.83□□□□□ -0.36
PPARGC1A-214ENST00000514517 ILDR2Q71H61 639 aa12.83□□□□□ -0.36
PPARGC1A-214ENST00000514517 NECTIN2Q92692 538 aa12.83□□□□□ -0.36
PPARGC1A-214ENST00000514517 UPF1Q92900 1129 aaKnown RBP eCLIP12.83□□□□□ -0.36
PPARGC1A-214ENST00000514517 DBF4Q9UBU7 674 aaPredicted RBP12.83□□□□□ -0.36
PPARGC1A-214ENST00000514517 RCAN3Q9UKA8 241 aa12.83□□□□□ -0.36
PPARGC1A-214ENST00000514517 ERBB4Q15303 1308 aa12.83□□□□□ -0.36
PPARGC1A-214ENST00000514517 RARSP54136 660 aaKnown RBP12.82□□□□□ -0.36
PPARGC1A-214ENST00000514517 KCNQ4P56696 695 aa12.82□□□□□ -0.36
PPARGC1A-214ENST00000514517 PROM2Q8N271 834 aa12.82□□□□□ -0.36
PPARGC1A-214ENST00000514517 CAMKK2Q96RR4 588 aa12.82□□□□□ -0.36
PPARGC1A-214ENST00000514517 SLC4A2P04920 1241 aa12.81□□□□□ -0.36
PPARGC1A-214ENST00000514517 RC3H1Q5TC82 1133 aaKnown RBP12.81□□□□□ -0.36
PPARGC1A-214ENST00000514517 DEFB132Q7Z7B7 95 aa12.81□□□□□ -0.36
PPARGC1A-214ENST00000514517 NPM2Q86SE8 214 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms