RNA–Protein interactions for RNA: ENST00000514285.1

SERF1B-207, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2

Gene SERF1B, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-207ENST00000514285 ADAMTS7Q9UKP4 1686 aa19.49■□□□□ 0.71
SERF1B-207ENST00000514285 MYBBP1AQ9BQG0 1328 aaKnown RBP19.49■□□□□ 0.71
SERF1B-207ENST00000514285 RNMTO43148 476 aaKnown RBP19.48■□□□□ 0.71
SERF1B-207ENST00000514285 TUBGCP6Q96RT7 1819 aa19.47■□□□□ 0.71
SERF1B-207ENST00000514285 NFATC2IPQ8NCF5 419 aa19.47■□□□□ 0.71
SERF1B-207ENST00000514285 SLC52A2Q9HAB3 445 aa19.47■□□□□ 0.71
SERF1B-207ENST00000514285 C4BP0C0L5 1744 aa19.46■□□□□ 0.71
SERF1B-207ENST00000514285 ZBTB7AO95365 584 aa19.46■□□□□ 0.71
SERF1B-207ENST00000514285 MTFR1LQ9H019 292 aa19.46■□□□□ 0.71
SERF1B-207ENST00000514285 LGR6Q9HBX8 967 aa19.46■□□□□ 0.71
SERF1B-207ENST00000514285 PNPLA7Q6ZV29 1317 aa19.46■□□□□ 0.71
SERF1B-207ENST00000514285 VIRMAQ69YN4 1812 aaKnown RBP19.46■□□□□ 0.71
SERF1B-207ENST00000514285 ZNF316A6NFI3 1004 aaPredicted RBP19.45■□□□□ 0.7
SERF1B-207ENST00000514285 GNAT3A8MTJ3 354 aa19.45■□□□□ 0.7
SERF1B-207ENST00000514285 ATP6V1AP38606 617 aa19.45■□□□□ 0.7
SERF1B-207ENST00000514285 PHACTR3Q96KR7 559 aa19.45■□□□□ 0.7
SERF1B-207ENST00000514285 ZNF831Q5JPB2 1677 aa19.45■□□□□ 0.7
SERF1B-207ENST00000514285 AK7Q96M32 723 aa19.44■□□□□ 0.7
SERF1B-207ENST00000514285 RBM42Q9BTD8 480 aaKnown RBP19.44■□□□□ 0.7
SERF1B-207ENST00000514285 NEFMP07197 916 aa19.43■□□□□ 0.7
SERF1B-207ENST00000514285 LINC00116Q8NCU8 138 aa19.43■□□□□ 0.7
SERF1B-207ENST00000514285 SLC16A10Q8TF71 515 aa19.43■□□□□ 0.7
SERF1B-207ENST00000514285 PRKRIP1Q9H875 184 aaPredicted RBP19.43■□□□□ 0.7
SERF1B-207ENST00000514285 ITPK1Q13572 414 aa19.42■□□□□ 0.7
SERF1B-207ENST00000514285 FLAD1Q8NFF5 587 aa19.42■□□□□ 0.7
SERF1B-207ENST00000514285 PNNQ9H307 717 aaKnown RBP19.41■□□□□ 0.7
SERF1B-207ENST00000514285 PPP1R1BQ9UD71 204 aaPredicted RBP19.41■□□□□ 0.7
SERF1B-207ENST00000514285 ATF5Q9Y2D1 282 aaPredicted RBP19.41■□□□□ 0.7
SERF1B-207ENST00000514285 PTCD1O75127 700 aaKnown RBP19.4■□□□□ 0.7
SERF1B-207ENST00000514285 PTGER2P43116 358 aa19.4■□□□□ 0.7
SERF1B-207ENST00000514285 TEFQ10587 303 aa19.4■□□□□ 0.7
SERF1B-207ENST00000514285 SLC4A9Q96Q91 983 aa19.4■□□□□ 0.7
SERF1B-207ENST00000514285 CEMIPQ8WUJ3 1361 aa19.4■□□□□ 0.7
SERF1B-207ENST00000514285 CICQ96RK0 1608 aaPredicted RBP19.4■□□□□ 0.7
SERF1B-207ENST00000514285 IL17REQ8NFR9 667 aa19.39■□□□□ 0.69
SERF1B-207ENST00000514285 COL5A3P25940 1745 aaPredicted RBP19.39■□□□□ 0.69
SERF1B-207ENST00000514285 UBR3Q6ZT12 1888 aa19.39■□□□□ 0.69
SERF1B-207ENST00000514285 SSFA2P28290 1259 aa19.38■□□□□ 0.69
SERF1B-207ENST00000514285 COL23A1Q86Y22 540 aaPredicted RBP19.38■□□□□ 0.69
SERF1B-207ENST00000514285 RTF1Q92541 710 aaKnown RBP19.38■□□□□ 0.69
SERF1B-207ENST00000514285 CNTNAP4Q9C0A0 1308 aa19.37■□□□□ 0.69
SERF1B-207ENST00000514285 GNPATO15228 680 aa19.37■□□□□ 0.69
SERF1B-207ENST00000514285 MSH5O43196 834 aa19.37■□□□□ 0.69
SERF1B-207ENST00000514285 PLEKHF1Q96S99 279 aa19.37■□□□□ 0.69
SERF1B-207ENST00000514285 SGIP1Q9BQI5 828 aa19.37■□□□□ 0.69
SERF1B-207ENST00000514285 KCPQ6ZWJ8 1503 aa19.36■□□□□ 0.69
SERF1B-207ENST00000514285 MAPK8IP3Q9UPT6 1336 aa19.36■□□□□ 0.69
SERF1B-207ENST00000514285 HTATSF1O43719 755 aaKnown RBP19.36■□□□□ 0.69
SERF1B-207ENST00000514285 SLC39A6Q13433 755 aa19.36■□□□□ 0.69
SERF1B-207ENST00000514285 RC3H1Q5TC82 1133 aaKnown RBP19.36■□□□□ 0.69
SERF1B-207ENST00000514285 SIPA1L3O60292 1781 aaPredicted RBP19.36■□□□□ 0.69
SERF1B-207ENST00000514285 TJP1Q07157 1748 aa19.35■□□□□ 0.69
SERF1B-207ENST00000514285 COL24A1Q17RW2 1714 aa19.35■□□□□ 0.69
SERF1B-207ENST00000514285 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.35■□□□□ 0.69
SERF1B-207ENST00000514285 PHF14O94880 888 aa19.35■□□□□ 0.69
SERF1B-207ENST00000514285 TTC5Q8N0Z6 440 aa19.35■□□□□ 0.69
SERF1B-207ENST00000514285 UBR2Q8IWV8 1755 aa19.34■□□□□ 0.69
SERF1B-207ENST00000514285 POLD1P28340 1107 aa19.34■□□□□ 0.69
SERF1B-207ENST00000514285 AMIGO3Q86WK7 504 aa19.34■□□□□ 0.69
SERF1B-207ENST00000514285 WDR43Q15061 677 aaKnown RBP eCLIP19.33■□□□□ 0.68
SERF1B-207ENST00000514285 MCM10Q7L590 875 aa19.33■□□□□ 0.68
SERF1B-207ENST00000514285 RTCBQ9Y3I0 505 aaKnown RBP19.33■□□□□ 0.68
SERF1B-207ENST00000514285 ADRA2BP18089 450 aa19.32■□□□□ 0.68
SERF1B-207ENST00000514285 NFE2L2Q16236 605 aa19.32■□□□□ 0.68
SERF1B-207ENST00000514285 ZNF790Q6PG37 636 aa19.32■□□□□ 0.68
SERF1B-207ENST00000514285 VSIG10Q8N0Z9 540 aa19.32■□□□□ 0.68
SERF1B-207ENST00000514285 ARXQ96QS3 562 aa19.32■□□□□ 0.68
SERF1B-207ENST00000514285 CRKLP46109 303 aaKnown RBP19.31■□□□□ 0.68
SERF1B-207ENST00000514285 MYH14Q7Z406 1995 aaKnown RBP19.31■□□□□ 0.68
SERF1B-207ENST00000514285 DLG5Q8TDM6 1919 aa19.3■□□□□ 0.68
SERF1B-207ENST00000514285 BTBD11A6QL63 1104 aa19.3■□□□□ 0.68
SERF1B-207ENST00000514285 DNAJC10Q8IXB1 793 aa19.3■□□□□ 0.68
SERF1B-207ENST00000514285 RPS6KA4O75676 772 aa19.29■□□□□ 0.68
SERF1B-207ENST00000514285 DCTN1Q14203 1278 aa19.29■□□□□ 0.68
SERF1B-207ENST00000514285 TRAPPC3LQ5T215 181 aa19.29■□□□□ 0.68
SERF1B-207ENST00000514285 MSL1Q68DK7 614 aa19.29■□□□□ 0.68
SERF1B-207ENST00000514285 SMIM5Q71RC9 77 aa19.29■□□□□ 0.68
SERF1B-207ENST00000514285 ZNF496Q96IT1 587 aaPredicted RBP19.28■□□□□ 0.68
SERF1B-207ENST00000514285 FMNL2Q96PY5 1086 aa19.28■□□□□ 0.68
SERF1B-207ENST00000514285 HEG1Q9ULI3 1381 aa19.28■□□□□ 0.68
SERF1B-207ENST00000514285 ANP32CO43423 234 aa19.27■□□□□ 0.68
SERF1B-207ENST00000514285 CYP19A1P11511 503 aaPredicted RBP19.27■□□□□ 0.68
SERF1B-207ENST00000514285 FHDC1Q9C0D6 1143 aaPredicted RBP19.27■□□□□ 0.68
SERF1B-207ENST00000514285 CCDC87Q9NVE4 849 aa19.27■□□□□ 0.68
SERF1B-207ENST00000514285 TAF7Q15545 349 aaPredicted RBP19.26■□□□□ 0.67
SERF1B-207ENST00000514285 INTS5Q6P9B9 1019 aaKnown RBP19.26■□□□□ 0.67
SERF1B-207ENST00000514285 TEX13AQ9BXU3 409 aaPredicted RBP19.26■□□□□ 0.67
SERF1B-207ENST00000514285 STARD3NLO95772 234 aa19.25■□□□□ 0.67
SERF1B-207ENST00000514285 RFC4P35249 363 aa19.25■□□□□ 0.67
SERF1B-207ENST00000514285 LMOD3Q0VAK6 560 aa19.25■□□□□ 0.67
SERF1B-207ENST00000514285 ARHGEF1Q92888 912 aaKnown RBP19.25■□□□□ 0.67
SERF1B-207ENST00000514285 RUNDC1Q96C34 613 aa19.25■□□□□ 0.67
SERF1B-207ENST00000514285 ADAMTS8Q9UP79 889 aa19.25■□□□□ 0.67
SERF1B-207ENST00000514285 TMPOP42166 694 aaKnown RBP19.24■□□□□ 0.67
SERF1B-207ENST00000514285 RIPK4P57078 832 aa19.24■□□□□ 0.67
SERF1B-207ENST00000514285 CCDC146Q8IYE0 955 aa19.24■□□□□ 0.67
SERF1B-207ENST00000514285 PNISRQ8TF01 805 aaKnown RBP19.24■□□□□ 0.67
SERF1B-207ENST00000514285 SYT17Q9BSW7 474 aa19.24■□□□□ 0.67
SERF1B-207ENST00000514285 C4AP0C0L4 1744 aa19.24■□□□□ 0.67
SERF1B-207ENST00000514285 SOS1Q07889 1333 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms