RNA–Protein interactions for RNA: ENST00000513841.1

ARHGEF28-213, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 3

Gene ARHGEF28, Length 710 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-213ENST00000513841 U2AF1L5P0DN76 240 aaPredicted RBP15.5■□□□□ 0.07
ARHGEF28-213ENST00000513841 U2AF1Q01081 240 aaKnown RBP eCLIP15.5■□□□□ 0.07
ARHGEF28-213ENST00000513841 ITPK1Q13572 414 aa15.5■□□□□ 0.07
ARHGEF28-213ENST00000513841 LINC00116Q8NCU8 138 aa15.5■□□□□ 0.07
ARHGEF28-213ENST00000513841 SYT17Q9BSW7 474 aa15.5■□□□□ 0.07
ARHGEF28-213ENST00000513841 ITGB4P16144 1822 aa15.48■□□□□ 0.07
ARHGEF28-213ENST00000513841 ZEB1P37275 1124 aaPredicted RBP15.48■□□□□ 0.07
ARHGEF28-213ENST00000513841 SMIM5Q71RC9 77 aa15.48■□□□□ 0.07
ARHGEF28-213ENST00000513841 GAS2L2Q8NHY3 880 aa15.48■□□□□ 0.07
ARHGEF28-213ENST00000513841 SLC4A9Q96Q91 983 aa15.48■□□□□ 0.07
ARHGEF28-213ENST00000513841 FHDC1Q9C0D6 1143 aaPredicted RBP15.48■□□□□ 0.07
ARHGEF28-213ENST00000513841 SLC52A2Q9HAB3 445 aa15.48■□□□□ 0.07
ARHGEF28-213ENST00000513841 KDM6AO15550 1401 aaPredicted RBP15.48■□□□□ 0.07
ARHGEF28-213ENST00000513841 LY75O60449 1722 aa15.48■□□□□ 0.07
ARHGEF28-213ENST00000513841 PAPPAQ13219 1627 aa15.47■□□□□ 0.07
ARHGEF28-213ENST00000513841 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.47■□□□□ 0.07
ARHGEF28-213ENST00000513841 FCHSD2O94868 740 aa15.47■□□□□ 0.07
ARHGEF28-213ENST00000513841 PHF14O94880 888 aa15.47■□□□□ 0.07
ARHGEF28-213ENST00000513841 PRKAR2BP31323 418 aa15.47■□□□□ 0.07
ARHGEF28-213ENST00000513841 PHACTR3Q96KR7 559 aa15.47■□□□□ 0.07
ARHGEF28-213ENST00000513841 CASZ1Q86V15 1759 aa15.47■□□□□ 0.07
ARHGEF28-213ENST00000513841 GNAT3A8MTJ3 354 aa15.46■□□□□ 0.07
ARHGEF28-213ENST00000513841 GNPATO15228 680 aa15.46■□□□□ 0.07
ARHGEF28-213ENST00000513841 TRAPPC3LQ5T215 181 aa15.46■□□□□ 0.07
ARHGEF28-213ENST00000513841 RC3H1Q5TC82 1133 aaKnown RBP15.46■□□□□ 0.07
ARHGEF28-213ENST00000513841 IL17REQ8NFR9 667 aa15.46■□□□□ 0.07
ARHGEF28-213ENST00000513841 RSPH6AQ9H0K4 717 aa15.46■□□□□ 0.07
ARHGEF28-213ENST00000513841 TOGARAM1Q9Y4F4 1720 aa15.46■□□□□ 0.06
ARHGEF28-213ENST00000513841 SSFA2P28290 1259 aa15.45■□□□□ 0.06
ARHGEF28-213ENST00000513841 MSL1Q68DK7 614 aa15.45■□□□□ 0.06
ARHGEF28-213ENST00000513841 AMIGO3Q86WK7 504 aa15.45■□□□□ 0.06
ARHGEF28-213ENST00000513841 KLHL34Q8N239 644 aa15.45■□□□□ 0.06
ARHGEF28-213ENST00000513841 RTCBQ9Y3I0 505 aaKnown RBP15.45■□□□□ 0.06
ARHGEF28-213ENST00000513841 SLC39A6Q13433 755 aa15.44■□□□□ 0.06
ARHGEF28-213ENST00000513841 RALBP1Q15311 655 aa15.44■□□□□ 0.06
ARHGEF28-213ENST00000513841 COL3A1P02461 1466 aaPredicted RBP15.44■□□□□ 0.06
ARHGEF28-213ENST00000513841 RPS6KA4O75676 772 aa15.43■□□□□ 0.06
ARHGEF28-213ENST00000513841 TEFQ10587 303 aa15.43■□□□□ 0.06
ARHGEF28-213ENST00000513841 NEFMP07197 916 aa15.42■□□□□ 0.06
ARHGEF28-213ENST00000513841 RTF1Q92541 710 aaKnown RBP15.41■□□□□ 0.06
ARHGEF28-213ENST00000513841 ARHGEF1Q92888 912 aaKnown RBP15.41■□□□□ 0.06
ARHGEF28-213ENST00000513841 RFC4P35249 363 aa15.4■□□□□ 0.06
ARHGEF28-213ENST00000513841 DNAJC10Q8IXB1 793 aa15.4■□□□□ 0.06
ARHGEF28-213ENST00000513841 TTC5Q8N0Z6 440 aa15.4■□□□□ 0.06
ARHGEF28-213ENST00000513841 PNNQ9H307 717 aaKnown RBP15.4■□□□□ 0.06
ARHGEF28-213ENST00000513841 CNTNAP4Q9C0A0 1308 aa15.4■□□□□ 0.06
ARHGEF28-213ENST00000513841 MAP3K5Q99683 1374 aa15.39■□□□□ 0.05
ARHGEF28-213ENST00000513841 ADRA2BP18089 450 aa15.39■□□□□ 0.05
ARHGEF28-213ENST00000513841 CRKLP46109 303 aaKnown RBP15.39■□□□□ 0.05
ARHGEF28-213ENST00000513841 NLGN1Q8N2Q7 840 aa15.39■□□□□ 0.05
ARHGEF28-213ENST00000513841 C5P01031 1676 aa15.38■□□□□ 0.05
ARHGEF28-213ENST00000513841 C4BP0C0L5 1744 aa15.38■□□□□ 0.05
ARHGEF28-213ENST00000513841 INTS5Q6P9B9 1019 aaKnown RBP15.38■□□□□ 0.05
ARHGEF28-213ENST00000513841 VSIG10Q8N0Z9 540 aa15.38■□□□□ 0.05
ARHGEF28-213ENST00000513841 BTBD11A6QL63 1104 aa15.37■□□□□ 0.05
ARHGEF28-213ENST00000513841 HTATSF1O43719 755 aaKnown RBP15.37■□□□□ 0.05
ARHGEF28-213ENST00000513841 GPR162Q16538 588 aa15.37■□□□□ 0.05
ARHGEF28-213ENST00000513841 ZNF790Q6PG37 636 aa15.37■□□□□ 0.05
ARHGEF28-213ENST00000513841 TAF1LQ8IZX4 1826 aa15.36■□□□□ 0.05
ARHGEF28-213ENST00000513841 CYP19A1P11511 503 aaPredicted RBP15.36■□□□□ 0.05
ARHGEF28-213ENST00000513841 MCM10Q7L590 875 aa15.36■□□□□ 0.05
ARHGEF28-213ENST00000513841 CCDC87Q9NVE4 849 aa15.36■□□□□ 0.05
ARHGEF28-213ENST00000513841 CD2APQ9Y5K6 639 aa15.36■□□□□ 0.05
ARHGEF28-213ENST00000513841 QSER1Q2KHR3 1735 aa15.36■□□□□ 0.05
ARHGEF28-213ENST00000513841 STARD3NLO95772 234 aa15.35■□□□□ 0.05
ARHGEF28-213ENST00000513841 DCTN1Q14203 1278 aa15.35■□□□□ 0.05
ARHGEF28-213ENST00000513841 PELP1Q8IZL8 1130 aaKnown RBP15.35■□□□□ 0.05
ARHGEF28-213ENST00000513841 NLGN2Q8NFZ4 835 aa15.35■□□□□ 0.05
ARHGEF28-213ENST00000513841 ZNF496Q96IT1 587 aaPredicted RBP15.35■□□□□ 0.05
ARHGEF28-213ENST00000513841 TEX13AQ9BXU3 409 aaPredicted RBP15.35■□□□□ 0.05
ARHGEF28-213ENST00000513841 MMP10P09238 476 aa15.34■□□□□ 0.05
ARHGEF28-213ENST00000513841 FMNL2Q96PY5 1086 aa15.34■□□□□ 0.05
ARHGEF28-213ENST00000513841 PLEKHF1Q96S99 279 aa15.34■□□□□ 0.05
ARHGEF28-213ENST00000513841 SCN11AQ9UI33 1791 aa15.34■□□□□ 0.05
ARHGEF28-213ENST00000513841 KCNQ3O43525 872 aa15.33■□□□□ 0.04
ARHGEF28-213ENST00000513841 GYS1P13807 737 aa15.33■□□□□ 0.04
ARHGEF28-213ENST00000513841 YY1P25490 414 aa15.33■□□□□ 0.04
ARHGEF28-213ENST00000513841 CANXP27824 592 aaKnown RBP15.33■□□□□ 0.04
ARHGEF28-213ENST00000513841 TAF7Q15545 349 aaPredicted RBP15.33■□□□□ 0.04
ARHGEF28-213ENST00000513841 MYBBP1AQ9BQG0 1328 aaKnown RBP15.33■□□□□ 0.04
ARHGEF28-213ENST00000513841 TUBGCP6Q96RT7 1819 aa15.33■□□□□ 0.04
ARHGEF28-213ENST00000513841 ZPR1O75312 459 aa15.32■□□□□ 0.04
ARHGEF28-213ENST00000513841 SRP68Q9UHB9 627 aaKnown RBP15.32■□□□□ 0.04
ARHGEF28-213ENST00000513841 PARP3Q9Y6F1 533 aa15.32■□□□□ 0.04
ARHGEF28-213ENST00000513841 MAPK8IP3Q9UPT6 1336 aa15.32■□□□□ 0.04
ARHGEF28-213ENST00000513841 CEMIPQ8WUJ3 1361 aa15.32■□□□□ 0.04
ARHGEF28-213ENST00000513841 NFE2L2Q16236 605 aa15.31■□□□□ 0.04
ARHGEF28-213ENST00000513841 PRKRIP1Q9H875 184 aaPredicted RBP15.31■□□□□ 0.04
ARHGEF28-213ENST00000513841 FKBP8Q14318 412 aa15.3■□□□□ 0.04
ARHGEF28-213ENST00000513841 UBR3Q6ZT12 1888 aa15.3■□□□□ 0.04
ARHGEF28-213ENST00000513841 MIS18AQ9NYP9 233 aa15.3■□□□□ 0.04
ARHGEF28-213ENST00000513841 ZBTB1Q9Y2K1 713 aa15.3■□□□□ 0.04
ARHGEF28-213ENST00000513841 MRC1P22897 1456 aa15.29■□□□□ 0.04
ARHGEF28-213ENST00000513841 HEG1Q9ULI3 1381 aa15.29■□□□□ 0.04
ARHGEF28-213ENST00000513841 SOS1Q07889 1333 aaPredicted RBP15.29■□□□□ 0.04
ARHGEF28-213ENST00000513841 A1BGP04217 495 aa15.29■□□□□ 0.04
ARHGEF28-213ENST00000513841 USP16Q9Y5T5 823 aa15.29■□□□□ 0.04
ARHGEF28-213ENST00000513841 ZNF831Q5JPB2 1677 aa15.28■□□□□ 0.04
ARHGEF28-213ENST00000513841 ZNF316A6NFI3 1004 aaPredicted RBP15.28■□□□□ 0.04
ARHGEF28-213ENST00000513841 GRIN3BO60391 1043 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms