RNA–Protein interactions for RNA: ENST00000513821.5

SGCA-209, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,090 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-209ENST00000513821 MSH5O43196 834 aa18.48■□□□□ 0.55
SGCA-209ENST00000513821 AK7Q96M32 723 aa18.48■□□□□ 0.55
SGCA-209ENST00000513821 LGR6Q9HBX8 967 aa18.48■□□□□ 0.55
SGCA-209ENST00000513821 TOGARAM1Q9Y4F4 1720 aa18.48■□□□□ 0.55
SGCA-209ENST00000513821 GNAT3A8MTJ3 354 aa18.47■□□□□ 0.55
SGCA-209ENST00000513821 PTGER2P43116 358 aa18.47■□□□□ 0.55
SGCA-209ENST00000513821 COL23A1Q86Y22 540 aaPredicted RBP18.47■□□□□ 0.55
SGCA-209ENST00000513821 SLC52A2Q9HAB3 445 aa18.47■□□□□ 0.55
SGCA-209ENST00000513821 KDM6AO15550 1401 aaPredicted RBP18.47■□□□□ 0.55
SGCA-209ENST00000513821 CASZ1Q86V15 1759 aa18.46■□□□□ 0.55
SGCA-209ENST00000513821 POLD1P28340 1107 aa18.46■□□□□ 0.55
SGCA-209ENST00000513821 PRKAR2BP31323 418 aa18.46■□□□□ 0.55
SGCA-209ENST00000513821 DCAF8L1A6NGE4 600 aa18.45■□□□□ 0.54
SGCA-209ENST00000513821 NEFMP07197 916 aa18.45■□□□□ 0.54
SGCA-209ENST00000513821 RC3H1Q5TC82 1133 aaKnown RBP18.45■□□□□ 0.54
SGCA-209ENST00000513821 RSPH6AQ9H0K4 717 aa18.45■□□□□ 0.54
SGCA-209ENST00000513821 PNNQ9H307 717 aaKnown RBP18.45■□□□□ 0.54
SGCA-209ENST00000513821 ITPK1Q13572 414 aa18.44■□□□□ 0.54
SGCA-209ENST00000513821 ARXQ96QS3 562 aa18.44■□□□□ 0.54
SGCA-209ENST00000513821 SGIP1Q9BQI5 828 aa18.44■□□□□ 0.54
SGCA-209ENST00000513821 PTCD1O75127 700 aaKnown RBP18.43■□□□□ 0.54
SGCA-209ENST00000513821 SSFA2P28290 1259 aa18.43■□□□□ 0.54
SGCA-209ENST00000513821 LINC00116Q8NCU8 138 aa18.43■□□□□ 0.54
SGCA-209ENST00000513821 TEFQ10587 303 aa18.42■□□□□ 0.54
SGCA-209ENST00000513821 PHACTR3Q96KR7 559 aa18.42■□□□□ 0.54
SGCA-209ENST00000513821 QSER1Q2KHR3 1735 aa18.41■□□□□ 0.54
SGCA-209ENST00000513821 SLC4A9Q96Q91 983 aa18.41■□□□□ 0.54
SGCA-209ENST00000513821 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.4■□□□□ 0.54
SGCA-209ENST00000513821 GNPATO15228 680 aa18.4■□□□□ 0.54
SGCA-209ENST00000513821 IL17REQ8NFR9 667 aa18.4■□□□□ 0.54
SGCA-209ENST00000513821 RTF1Q92541 710 aaKnown RBP18.4■□□□□ 0.54
SGCA-209ENST00000513821 RTCBQ9Y3I0 505 aaKnown RBP18.4■□□□□ 0.54
SGCA-209ENST00000513821 MAP3K5Q99683 1374 aa18.4■□□□□ 0.54
SGCA-209ENST00000513821 C5P01031 1676 aa18.39■□□□□ 0.53
SGCA-209ENST00000513821 HTATSF1O43719 755 aaKnown RBP18.39■□□□□ 0.53
SGCA-209ENST00000513821 TRAPPC3LQ5T215 181 aa18.39■□□□□ 0.53
SGCA-209ENST00000513821 SYT17Q9BSW7 474 aa18.39■□□□□ 0.53
SGCA-209ENST00000513821 TAF1LQ8IZX4 1826 aa18.39■□□□□ 0.53
SGCA-209ENST00000513821 SCN11AQ9UI33 1791 aa18.38■□□□□ 0.53
SGCA-209ENST00000513821 RPS6KA4O75676 772 aa18.38■□□□□ 0.53
SGCA-209ENST00000513821 PHF14O94880 888 aa18.38■□□□□ 0.53
SGCA-209ENST00000513821 ADRA2BP18089 450 aa18.38■□□□□ 0.53
SGCA-209ENST00000513821 TTC5Q8N0Z6 440 aa18.38■□□□□ 0.53
SGCA-209ENST00000513821 SLC39A6Q13433 755 aa18.37■□□□□ 0.53
SGCA-209ENST00000513821 VSIG10Q8N0Z9 540 aa18.37■□□□□ 0.53
SGCA-209ENST00000513821 FHDC1Q9C0D6 1143 aaPredicted RBP18.37■□□□□ 0.53
SGCA-209ENST00000513821 MYBBP1AQ9BQG0 1328 aaKnown RBP18.37■□□□□ 0.53
SGCA-209ENST00000513821 CNTNAP4Q9C0A0 1308 aa18.37■□□□□ 0.53
SGCA-209ENST00000513821 C4BP0C0L5 1744 aa18.37■□□□□ 0.53
SGCA-209ENST00000513821 TEX13AQ9BXU3 409 aaPredicted RBP18.35■□□□□ 0.53
SGCA-209ENST00000513821 ZNF831Q5JPB2 1677 aa18.34■□□□□ 0.53
SGCA-209ENST00000513821 CRKLP46109 303 aaKnown RBP18.34■□□□□ 0.53
SGCA-209ENST00000513821 RFC4P35249 363 aa18.33■□□□□ 0.52
SGCA-209ENST00000513821 MSL1Q68DK7 614 aa18.33■□□□□ 0.52
SGCA-209ENST00000513821 ZNF790Q6PG37 636 aa18.33■□□□□ 0.52
SGCA-209ENST00000513821 AMIGO3Q86WK7 504 aa18.33■□□□□ 0.52
SGCA-209ENST00000513821 NLGN1Q8N2Q7 840 aa18.33■□□□□ 0.52
SGCA-209ENST00000513821 ARHGEF1Q92888 912 aaKnown RBP18.33■□□□□ 0.52
SGCA-209ENST00000513821 PRKRIP1Q9H875 184 aaPredicted RBP18.33■□□□□ 0.52
SGCA-209ENST00000513821 MRC1P22897 1456 aa18.33■□□□□ 0.52
SGCA-209ENST00000513821 CEMIPQ8WUJ3 1361 aa18.32■□□□□ 0.52
SGCA-209ENST00000513821 ZNF316A6NFI3 1004 aaPredicted RBP18.32■□□□□ 0.52
SGCA-209ENST00000513821 BTBD11A6QL63 1104 aa18.32■□□□□ 0.52
SGCA-209ENST00000513821 STARD3NLO95772 234 aa18.32■□□□□ 0.52
SGCA-209ENST00000513821 SMIM5Q71RC9 77 aa18.32■□□□□ 0.52
SGCA-209ENST00000513821 DNAJC10Q8IXB1 793 aa18.32■□□□□ 0.52
SGCA-209ENST00000513821 PLEKHF1Q96S99 279 aa18.32■□□□□ 0.52
SGCA-209ENST00000513821 TUBGCP6Q96RT7 1819 aa18.32■□□□□ 0.52
SGCA-209ENST00000513821 MAPK8IP3Q9UPT6 1336 aa18.31■□□□□ 0.52
SGCA-209ENST00000513821 CYP19A1P11511 503 aaPredicted RBP18.31■□□□□ 0.52
SGCA-209ENST00000513821 CCDC87Q9NVE4 849 aa18.31■□□□□ 0.52
SGCA-209ENST00000513821 ADAMTS7Q9UKP4 1686 aa18.31■□□□□ 0.52
SGCA-209ENST00000513821 TAF7Q15545 349 aaPredicted RBP18.3■□□□□ 0.52
SGCA-209ENST00000513821 NFE2L2Q16236 605 aa18.3■□□□□ 0.52
SGCA-209ENST00000513821 INTS5Q6P9B9 1019 aaKnown RBP18.3■□□□□ 0.52
SGCA-209ENST00000513821 KLHL34Q8N239 644 aa18.3■□□□□ 0.52
SGCA-209ENST00000513821 FMNL2Q96PY5 1086 aa18.3■□□□□ 0.52
SGCA-209ENST00000513821 UBR3Q6ZT12 1888 aa18.3■□□□□ 0.52
SGCA-209ENST00000513821 MCM10Q7L590 875 aa18.29■□□□□ 0.52
SGCA-209ENST00000513821 ZNF496Q96IT1 587 aaPredicted RBP18.29■□□□□ 0.52
SGCA-209ENST00000513821 CD2APQ9Y5K6 639 aa18.29■□□□□ 0.52
SGCA-209ENST00000513821 WDR43Q15061 677 aaKnown RBP eCLIP18.28■□□□□ 0.52
SGCA-209ENST00000513821 COL24A1Q17RW2 1714 aa18.28■□□□□ 0.52
SGCA-209ENST00000513821 PNISRQ8TF01 805 aaKnown RBP18.27■□□□□ 0.52
SGCA-209ENST00000513821 ZPR1O75312 459 aa18.26■□□□□ 0.51
SGCA-209ENST00000513821 DCTN1Q14203 1278 aa18.26■□□□□ 0.51
SGCA-209ENST00000513821 HEG1Q9ULI3 1381 aa18.26■□□□□ 0.51
SGCA-209ENST00000513821 VIRMAQ69YN4 1812 aaKnown RBP18.26■□□□□ 0.51
SGCA-209ENST00000513821 A0A087WZG4 1122 aa18.25■□□□□ 0.51
SGCA-209ENST00000513821 GYS1P13807 737 aa18.25■□□□□ 0.51
SGCA-209ENST00000513821 NPM2Q86SE8 214 aaKnown RBP18.25■□□□□ 0.51
SGCA-209ENST00000513821 MYH14Q7Z406 1995 aaKnown RBP18.24■□□□□ 0.51
SGCA-209ENST00000513821 MMP10P09238 476 aa18.24■□□□□ 0.51
SGCA-209ENST00000513821 GPR162Q16538 588 aa18.24■□□□□ 0.51
SGCA-209ENST00000513821 KCPQ6ZWJ8 1503 aa18.23■□□□□ 0.51
SGCA-209ENST00000513821 COL5A3P25940 1745 aaPredicted RBP18.23■□□□□ 0.51
SGCA-209ENST00000513821 KCNQ3O43525 872 aa18.23■□□□□ 0.51
SGCA-209ENST00000513821 SNRPA1P09661 255 aaKnown RBP18.23■□□□□ 0.51
SGCA-209ENST00000513821 RIPK4P57078 832 aa18.23■□□□□ 0.51
SGCA-209ENST00000513821 LMOD3Q0VAK6 560 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms