RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 NBPF15Q8N660 670 aa12.16□□□□□ -0.46
TRAPPC11-210ENST00000513600 DNAAF2Q9NVR5 837 aaKnown RBP12.16□□□□□ -0.46
TRAPPC11-210ENST00000513600 SENP3-EIF4A1A0A087X0R7 540 aa12.15□□□□□ -0.46
TRAPPC11-210ENST00000513600 SMTNP53814 917 aa12.15□□□□□ -0.46
TRAPPC11-210ENST00000513600 TMEM214Q6NUQ4 689 aaKnown RBP12.15□□□□□ -0.46
TRAPPC11-210ENST00000513600 TAS1R3Q7RTX0 852 aa12.15□□□□□ -0.46
TRAPPC11-210ENST00000513600 SLC4A9Q96Q91 983 aa12.15□□□□□ -0.46
TRAPPC11-210ENST00000513600 BACH1O14867 736 aa12.14□□□□□ -0.47
TRAPPC11-210ENST00000513600 ZBTB7BO15156 539 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC11-210ENST00000513600 LMOD1P29536 600 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC11-210ENST00000513600 CLDN10P78369 228 aa12.14□□□□□ -0.47
TRAPPC11-210ENST00000513600 GNASQ5JWF2 1037 aa12.14□□□□□ -0.47
TRAPPC11-210ENST00000513600 LCE2AQ5TA79 106 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC11-210ENST00000513600 LARGE2Q8N3Y3 721 aa12.14□□□□□ -0.47
TRAPPC11-210ENST00000513600 OGFOD1Q8N543 542 aa12.14□□□□□ -0.47
TRAPPC11-210ENST00000513600 IRF7Q92985 503 aa12.14□□□□□ -0.47
TRAPPC11-210ENST00000513600 SERTAD1Q9UHV2 236 aa12.14□□□□□ -0.47
TRAPPC11-210ENST00000513600 PPARGC1BQ86YN6 1023 aaKnown RBP12.13□□□□□ -0.47
TRAPPC11-210ENST00000513600 CFAP70Q5T0N1 1121 aa12.12□□□□□ -0.47
TRAPPC11-210ENST00000513600 CCDC102BQ68D86 513 aa12.12□□□□□ -0.47
TRAPPC11-210ENST00000513600 ZNF358Q9NW07 568 aa12.12□□□□□ -0.47
TRAPPC11-210ENST00000513600 DYRK1BQ9Y463 629 aa12.12□□□□□ -0.47
TRAPPC11-210ENST00000513600 RASA1P20936 1047 aa12.11□□□□□ -0.47
TRAPPC11-210ENST00000513600 ITGA6P23229 1130 aa12.11□□□□□ -0.47
TRAPPC11-210ENST00000513600 KANK4Q5T7N3 995 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC11-210ENST00000513600 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRAPPC11-210ENST00000513600 TPCN2Q8NHX9 752 aa12.11□□□□□ -0.47
TRAPPC11-210ENST00000513600 VRTNQ9H8Y1 702 aa12.11□□□□□ -0.47
TRAPPC11-210ENST00000513600 TIMMDC1Q9NPL8 285 aa12.11□□□□□ -0.47
TRAPPC11-210ENST00000513600 KIAA1024Q9UPX6 916 aa12.11□□□□□ -0.47
TRAPPC11-210ENST00000513600 A6NJY4 79 aa12.1□□□□□ -0.47
TRAPPC11-210ENST00000513600 VSIG8P0DPA2 414 aa12.1□□□□□ -0.47
TRAPPC11-210ENST00000513600 MTFR1Q15390 333 aa12.1□□□□□ -0.47
TRAPPC11-210ENST00000513600 LARP1Q6PKG0 1096 aaKnown RBP12.1□□□□□ -0.47
TRAPPC11-210ENST00000513600 SIX5Q8N196 739 aa12.1□□□□□ -0.47
TRAPPC11-210ENST00000513600 RHBDD1Q8TEB9 315 aa12.1□□□□□ -0.47
TRAPPC11-210ENST00000513600 RBM19Q9Y4C8 960 aaKnown RBP12.1□□□□□ -0.47
TRAPPC11-210ENST00000513600 CDK2AP1O14519 115 aa12.09□□□□□ -0.47
TRAPPC11-210ENST00000513600 C4orf17Q53FE4 359 aa12.08□□□□□ -0.48
TRAPPC11-210ENST00000513600 NANOS1Q8WY41 292 aaKnown RBP12.08□□□□□ -0.48
TRAPPC11-210ENST00000513600 ZNF594Q96JF6 807 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC11-210ENST00000513600 ERBB4Q15303 1308 aa12.08□□□□□ -0.48
TRAPPC11-210ENST00000513600 PHKA2P46019 1235 aa12.07□□□□□ -0.48
TRAPPC11-210ENST00000513600 NIFKQ9BYG3 293 aaKnown RBP12.07□□□□□ -0.48
TRAPPC11-210ENST00000513600 SERPINA10Q9UK55 444 aa12.07□□□□□ -0.48
TRAPPC11-210ENST00000513600 M0R2N6 131 aa12.06□□□□□ -0.48
TRAPPC11-210ENST00000513600 LCE2CQ5TA81 110 aa12.06□□□□□ -0.48
TRAPPC11-210ENST00000513600 CCDC97Q96F63 343 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC11-210ENST00000513600 A0A1B0GTH6 734 aa12.05□□□□□ -0.48
TRAPPC11-210ENST00000513600 ARID3CA6NKF2 412 aa12.05□□□□□ -0.48
TRAPPC11-210ENST00000513600 FAM196BA6NMK8 535 aa12.05□□□□□ -0.48
TRAPPC11-210ENST00000513600 DKK1O94907 266 aa12.05□□□□□ -0.48
TRAPPC11-210ENST00000513600 SV2AQ7L0J3 742 aa12.05□□□□□ -0.48
TRAPPC11-210ENST00000513600 GMCL1Q96IK5 515 aa12.05□□□□□ -0.48
TRAPPC11-210ENST00000513600 GAS2L1Q99501 681 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC11-210ENST00000513600 IQSEC3Q9UPP2 1182 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC11-210ENST00000513600 F11P03951 625 aa12.04□□□□□ -0.48
TRAPPC11-210ENST00000513600 RFX1P22670 979 aa12.04□□□□□ -0.48
TRAPPC11-210ENST00000513600 PTK7Q13308 1070 aa12.04□□□□□ -0.48
TRAPPC11-210ENST00000513600 RIPOR1Q6ZS17 1223 aa12.04□□□□□ -0.48
TRAPPC11-210ENST00000513600 SCHIP1Q9P0W5 487 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC11-210ENST00000513600 USP17L15C9J2P7 530 aa12.03□□□□□ -0.48
TRAPPC11-210ENST00000513600 USP17L10C9JJH3 530 aa12.03□□□□□ -0.48
TRAPPC11-210ENST00000513600 USP17L13C9JLJ4 530 aa12.03□□□□□ -0.48
TRAPPC11-210ENST00000513600 USP17L12C9JPN9 530 aa12.03□□□□□ -0.48
TRAPPC11-210ENST00000513600 USP17L11C9JVI0 530 aa12.03□□□□□ -0.48
TRAPPC11-210ENST00000513600 USP17L21D6R901 530 aa12.03□□□□□ -0.48
TRAPPC11-210ENST00000513600 USP17L18D6R9N7 530 aa12.03□□□□□ -0.48
TRAPPC11-210ENST00000513600 USP17L22D6RA61 530 aa12.03□□□□□ -0.48
TRAPPC11-210ENST00000513600 USP17L17D6RBQ6 530 aa12.03□□□□□ -0.48
TRAPPC11-210ENST00000513600 USP17L19D6RCP7 530 aa12.03□□□□□ -0.48
TRAPPC11-210ENST00000513600 USP17L20D6RJB6 530 aa12.03□□□□□ -0.48
TRAPPC11-210ENST00000513600 H7C1W4 665 aa12.03□□□□□ -0.48
TRAPPC11-210ENST00000513600 GMPRP36959 345 aa12.03□□□□□ -0.48
TRAPPC11-210ENST00000513600 EPHA4P54764 986 aa12.03□□□□□ -0.48
TRAPPC11-210ENST00000513600 SEC13P55735 322 aa12.03□□□□□ -0.48
TRAPPC11-210ENST00000513600 USP17L24Q0WX57 530 aa12.03□□□□□ -0.48
TRAPPC11-210ENST00000513600 CRTC2Q53ET0 693 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC11-210ENST00000513600 VWA5B2Q8N398 1253 aa12.03□□□□□ -0.48
TRAPPC11-210ENST00000513600 CDC14CA4D256 554 aa12.02□□□□□ -0.49
TRAPPC11-210ENST00000513600 SFI1A8K8P3 1242 aa12.02□□□□□ -0.49
TRAPPC11-210ENST00000513600 PLA2G4AP47712 749 aa12.02□□□□□ -0.49
TRAPPC11-210ENST00000513600 TRIM22Q8IYM9 498 aa12.02□□□□□ -0.49
TRAPPC11-210ENST00000513600 TNS4Q8IZW8 715 aa12.02□□□□□ -0.49
TRAPPC11-210ENST00000513600 WIPF1O43516 503 aa12.01□□□□□ -0.49
TRAPPC11-210ENST00000513600 FOXK2Q01167 660 aa12.01□□□□□ -0.49
TRAPPC11-210ENST00000513600 CUEDC1Q9NWM3 386 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC11-210ENST00000513600 CABP1Q9NZU7 370 aa12.01□□□□□ -0.49
TRAPPC11-210ENST00000513600 ANKMY2Q8IV38 441 aa12□□□□□ -0.49
TRAPPC11-210ENST00000513600 ZNF295-AS1Q8N0V1 137 aa12□□□□□ -0.49
TRAPPC11-210ENST00000513600 USP3Q9Y6I4 520 aa12□□□□□ -0.49
TRAPPC11-210ENST00000513600 MSX1P28360 303 aa11.99□□□□□ -0.49
TRAPPC11-210ENST00000513600 DPYDQ12882 1025 aa11.99□□□□□ -0.49
TRAPPC11-210ENST00000513600 SLC9A9Q8IVB4 645 aa11.99□□□□□ -0.49
TRAPPC11-210ENST00000513600 C1orf216Q8TAB5 229 aa11.99□□□□□ -0.49
TRAPPC11-210ENST00000513600 CSB-PGBD3P0DP91 1061 aa11.98□□□□□ -0.49
TRAPPC11-210ENST00000513600 DBN1Q16643 649 aa11.98□□□□□ -0.49
TRAPPC11-210ENST00000513600 CDCA8Q53HL2 280 aa11.98□□□□□ -0.49
TRAPPC11-210ENST00000513600 PGBD3Q8N328 593 aa11.98□□□□□ -0.49
TRAPPC11-210ENST00000513600 GPR161Q8N6U8 529 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms