RNA–Protein interactions for RNA: ENST00000513557.5

GYPB-214, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 277 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-214ENST00000513557 ESCO1Q5FWF5 840 aa6.73□□□□□ -1.33
GYPB-214ENST00000513557 TNS4Q8IZW8 715 aa6.73□□□□□ -1.33
GYPB-214ENST00000513557 SCG3Q8WXD2 468 aaKnown RBP6.73□□□□□ -1.33
GYPB-214ENST00000513557 PURBQ96QR8 312 aaKnown RBP6.73□□□□□ -1.33
GYPB-214ENST00000513557 EMILIN1Q9Y6C2 1016 aa6.73□□□□□ -1.33
GYPB-214ENST00000513557 FOXO3O43524 673 aa6.72□□□□□ -1.33
GYPB-214ENST00000513557 DNAJC14Q6Y2X3 702 aaPredicted RBP6.72□□□□□ -1.33
GYPB-214ENST00000513557 CAPN12Q6ZSI9 719 aa6.72□□□□□ -1.33
GYPB-214ENST00000513557 GAS2L2Q8NHY3 880 aa6.72□□□□□ -1.33
GYPB-214ENST00000513557 COL26A1Q96A83 441 aa6.72□□□□□ -1.33
GYPB-214ENST00000513557 VTI1AQ96AJ9 217 aa6.72□□□□□ -1.33
GYPB-214ENST00000513557 DNMT3AQ9Y6K1 912 aaPredicted RBP6.72□□□□□ -1.33
GYPB-214ENST00000513557 C21orf2O43822 256 aa6.71□□□□□ -1.34
GYPB-214ENST00000513557 ADD1P35611 737 aaKnown RBP6.71□□□□□ -1.34
GYPB-214ENST00000513557 EPHA4P54764 986 aa6.71□□□□□ -1.34
GYPB-214ENST00000513557 FKBP4Q02790 459 aaKnown RBP eCLIP6.71□□□□□ -1.34
GYPB-214ENST00000513557 SF3B2Q13435 895 aaKnown RBP6.71□□□□□ -1.34
GYPB-214ENST00000513557 SLC4A9Q96Q91 983 aa6.71□□□□□ -1.34
GYPB-214ENST00000513557 TSPAN10Q9H1Z9 355 aaPredicted RBP6.71□□□□□ -1.34
GYPB-214ENST00000513557 ARHGEF10LQ9HCE6 1279 aa6.71□□□□□ -1.34
GYPB-214ENST00000513557 ATAD2Q6PL18 1390 aa6.7□□□□□ -1.34
GYPB-214ENST00000513557 E9PSI1 815 aa6.7□□□□□ -1.34
GYPB-214ENST00000513557 PPP1R12BO60237 982 aaPredicted RBP6.7□□□□□ -1.34
GYPB-214ENST00000513557 ALDH1A1P00352 501 aa6.7□□□□□ -1.34
GYPB-214ENST00000513557 NAA30Q147X3 362 aaPredicted RBP6.7□□□□□ -1.34
GYPB-214ENST00000513557 IFFO2Q5TF58 517 aa6.7□□□□□ -1.34
GYPB-214ENST00000513557 SPRYD7Q5W111 196 aa6.7□□□□□ -1.34
GYPB-214ENST00000513557 CHMP7Q8WUX9 453 aaPredicted RBP6.7□□□□□ -1.34
GYPB-214ENST00000513557 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.7□□□□□ -1.342e-23■■■■■ 397.5
GYPB-214ENST00000513557 RAB6BQ9NRW1 208 aa6.7□□□□□ -1.34
GYPB-214ENST00000513557 SCHIP1Q9P0W5 487 aaPredicted RBP6.7□□□□□ -1.34
GYPB-214ENST00000513557 WASF2Q9Y6W5 498 aa6.7□□□□□ -1.34
GYPB-214ENST00000513557 A6NJY4 79 aa6.69□□□□□ -1.34
GYPB-214ENST00000513557 SMTNP53814 917 aa6.69□□□□□ -1.34
GYPB-214ENST00000513557 FOXK2Q01167 660 aa6.69□□□□□ -1.34
GYPB-214ENST00000513557 NNTQ13423 1086 aa6.69□□□□□ -1.34
GYPB-214ENST00000513557 MTMR3Q13615 1198 aa6.69□□□□□ -1.34
GYPB-214ENST00000513557 ZNF697Q5TEC3 545 aa6.69□□□□□ -1.34
GYPB-214ENST00000513557 ADH1AP07327 375 aa6.68□□□□□ -1.34
GYPB-214ENST00000513557 FOXC1Q12948 553 aa6.68□□□□□ -1.34
GYPB-214ENST00000513557 TBCELQ5QJ74 424 aa6.68□□□□□ -1.34
GYPB-214ENST00000513557 ZNF598Q86UK7 904 aaKnown RBP6.68□□□□□ -1.34
GYPB-214ENST00000513557 SLC9A9Q8IVB4 645 aa6.68□□□□□ -1.34
GYPB-214ENST00000513557 HELQQ8TDG4 1101 aa6.68□□□□□ -1.34
GYPB-214ENST00000513557 XAGE2Q96GT9 111 aa6.68□□□□□ -1.34
GYPB-214ENST00000513557 A0A1W2PRU2 124 aa6.67□□□□□ -1.34
GYPB-214ENST00000513557 RBM47A0AV96 593 aaKnown RBP6.67□□□□□ -1.34
GYPB-214ENST00000513557 IL2RAP01589 272 aa6.67□□□□□ -1.34
GYPB-214ENST00000513557 MTFR1Q15390 333 aa6.67□□□□□ -1.34
GYPB-214ENST00000513557 TLR1Q15399 786 aa6.67□□□□□ -1.34
GYPB-214ENST00000513557 NOM1Q5C9Z4 860 aaKnown RBP6.67□□□□□ -1.34
GYPB-214ENST00000513557 CNKSR1Q969H4 720 aa6.67□□□□□ -1.34
GYPB-214ENST00000513557 CHMP3Q9Y3E7 222 aa6.67□□□□□ -1.34
GYPB-214ENST00000513557 ANKRD33BA6NCL7 494 aa6.66□□□□□ -1.34
GYPB-214ENST00000513557 MAPK1P28482 360 aa6.66□□□□□ -1.34
GYPB-214ENST00000513557 PSMA6P60900 246 aaKnown RBP6.66□□□□□ -1.34
GYPB-214ENST00000513557 ARHGAP4P98171 946 aa6.66□□□□□ -1.34
GYPB-214ENST00000513557 CBLBQ13191 982 aa6.66□□□□□ -1.34
GYPB-214ENST00000513557 CLN3Q13286 438 aa6.66□□□□□ -1.34
GYPB-214ENST00000513557 ECM1Q16610 540 aa6.66□□□□□ -1.34
GYPB-214ENST00000513557 C16orf46Q6P387 395 aa6.66□□□□□ -1.34
GYPB-214ENST00000513557 STAG2Q8N3U4 1231 aa6.66□□□□□ -1.34
GYPB-214ENST00000513557 SNIP1Q8TAD8 396 aaKnown RBP6.66□□□□□ -1.34
GYPB-214ENST00000513557 ESYT1Q9BSJ8 1104 aa6.66□□□□□ -1.34
GYPB-214ENST00000513557 C2orf49Q9BVC5 232 aaPredicted RBP6.66□□□□□ -1.34
GYPB-214ENST00000513557 PKD2L1Q9P0L9 805 aa6.66□□□□□ -1.34
GYPB-214ENST00000513557 DCTN4Q9UJW0 460 aa6.66□□□□□ -1.34
GYPB-214ENST00000513557 CDK2AP1O14519 115 aa6.65□□□□□ -1.34
GYPB-214ENST00000513557 FAM13AO94988 1023 aa6.65□□□□□ -1.34
GYPB-214ENST00000513557 ZSCAN29Q8IWY8 852 aaPredicted RBP6.65□□□□□ -1.34
GYPB-214ENST00000513557 NBPF15Q8N660 670 aa6.65□□□□□ -1.34
GYPB-214ENST00000513557 ITPKCQ96DU7 683 aa6.65□□□□□ -1.34
GYPB-214ENST00000513557 BCL2L13Q9BXK5 485 aa6.65□□□□□ -1.34
GYPB-214ENST00000513557 TTC24A2A3L6 582 aaPredicted RBP6.64□□□□□ -1.35
GYPB-214ENST00000513557 ZIC2O95409 532 aaPredicted RBP6.64□□□□□ -1.35
GYPB-214ENST00000513557 MMRN1Q13201 1228 aa6.64□□□□□ -1.35
GYPB-214ENST00000513557 Q6ZVU0 165 aa6.64□□□□□ -1.35
GYPB-214ENST00000513557 NPAS4Q8IUM7 802 aa6.64□□□□□ -1.35
GYPB-214ENST00000513557 KDF1Q8NAX2 398 aaPredicted RBP6.64□□□□□ -1.35
GYPB-214ENST00000513557 ASB16Q96NS5 453 aa6.64□□□□□ -1.35
GYPB-214ENST00000513557 PRKD2Q9BZL6 878 aa6.64□□□□□ -1.35
GYPB-214ENST00000513557 SAP130Q9H0E3 1048 aa6.64□□□□□ -1.35
GYPB-214ENST00000513557 IQSEC3Q9UPP2 1182 aaPredicted RBP6.64□□□□□ -1.35
GYPB-214ENST00000513557 HRH3Q9Y5N1 445 aa6.64□□□□□ -1.35
GYPB-214ENST00000513557 V9GY48 417 aaPredicted RBP6.64□□□□□ -1.35
GYPB-214ENST00000513557 A0A0G2JS52 829 aa6.63□□□□□ -1.35
GYPB-214ENST00000513557 MEN1O00255 615 aa6.63□□□□□ -1.35
GYPB-214ENST00000513557 NPR3P17342 541 aa6.63□□□□□ -1.35
GYPB-214ENST00000513557 MPSTP25325 297 aa6.63□□□□□ -1.35
GYPB-214ENST00000513557 PTGIRP43119 386 aa6.63□□□□□ -1.35
GYPB-214ENST00000513557 WDR4P57081 412 aaKnown RBP6.63□□□□□ -1.35
GYPB-214ENST00000513557 CYP4X1Q8N118 509 aa6.63□□□□□ -1.35
GYPB-214ENST00000513557 AGBL1Q96MI9 1066 aa6.63□□□□□ -1.35
GYPB-214ENST00000513557 NLRP3Q96P20 1036 aa6.63□□□□□ -1.35
GYPB-214ENST00000513557 KLF16Q9BXK1 252 aaPredicted RBP6.63□□□□□ -1.35
GYPB-214ENST00000513557 ZFAND3Q9H8U3 227 aa6.63□□□□□ -1.35
GYPB-214ENST00000513557 USP3Q9Y6I4 520 aa6.63□□□□□ -1.35
GYPB-214ENST00000513557 SERTM1A2A2V5 107 aa6.62□□□□□ -1.35
GYPB-214ENST00000513557 UNCXA6NJT0 531 aa6.62□□□□□ -1.35
GYPB-214ENST00000513557 J3QL48 77 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms