RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 DDX54Q8TDD1 881 aaKnown RBP13.56□□□□□ -0.24
CCL28-203ENST00000513525 C5P01031 1676 aa13.56□□□□□ -0.24
CCL28-203ENST00000513525 STK32BQ9NY57 414 aa13.55□□□□□ -0.24
CCL28-203ENST00000513525 EMILIN1Q9Y6C2 1016 aa13.55□□□□□ -0.24
CCL28-203ENST00000513525 NSD2O96028 1365 aa13.55□□□□□ -0.24
CCL28-203ENST00000513525 RAPGEF4Q8WZA2 1011 aa13.54□□□□□ -0.24
CCL28-203ENST00000513525 USHBP1Q8N6Y0 703 aa13.54□□□□□ -0.24
CCL28-203ENST00000513525 FAM163AQ96GL9 167 aaPredicted RBP13.54□□□□□ -0.24
CCL28-203ENST00000513525 WASHC2AQ641Q2 1341 aa13.53□□□□□ -0.24
CCL28-203ENST00000513525 TATP17735 454 aaPredicted RBP13.53□□□□□ -0.24
CCL28-203ENST00000513525 PCDH11XQ9BZA7 1347 aa13.52□□□□□ -0.24
CCL28-203ENST00000513525 PCDH11YQ9BZA8 1340 aa13.52□□□□□ -0.24
CCL28-203ENST00000513525 SLC27A3Q5K4L6 730 aa13.52□□□□□ -0.25
CCL28-203ENST00000513525 KIF12Q96FN5 646 aa13.52□□□□□ -0.25
CCL28-203ENST00000513525 POLR3GLQ9BT43 218 aa13.52□□□□□ -0.25
CCL28-203ENST00000513525 PDGFDQ9GZP0 370 aaPredicted RBP13.52□□□□□ -0.25
CCL28-203ENST00000513525 LRRC4BQ9NT99 713 aa13.52□□□□□ -0.25
CCL28-203ENST00000513525 PRIM1P49642 420 aaKnown RBP13.51□□□□□ -0.25
CCL28-203ENST00000513525 PLEKHG2Q9H7P9 1386 aa13.51□□□□□ -0.25
CCL28-203ENST00000513525 VIRMAQ69YN4 1812 aaKnown RBP13.5□□□□□ -0.25
CCL28-203ENST00000513525 SYTL4Q96C24 671 aaPredicted RBP13.5□□□□□ -0.25
CCL28-203ENST00000513525 POLKQ9UBT6 870 aa13.5□□□□□ -0.25
CCL28-203ENST00000513525 PPP1R1BQ9UD71 204 aaPredicted RBP13.5□□□□□ -0.25
CCL28-203ENST00000513525 PANK3Q9H999 370 aa13.49□□□□□ -0.25
CCL28-203ENST00000513525 PPM1GO15355 546 aaPredicted RBP13.49□□□□□ -0.25
CCL28-203ENST00000513525 TIE1P35590 1138 aa13.49□□□□□ -0.25
CCL28-203ENST00000513525 PTGER2P43116 358 aa13.49□□□□□ -0.25
CCL28-203ENST00000513525 ZNF827Q17R98 1081 aa13.49□□□□□ -0.25
CCL28-203ENST00000513525 MTFR1LQ9H019 292 aa13.49□□□□□ -0.25
CCL28-203ENST00000513525 CHD4Q14839 1912 aa13.48□□□□□ -0.25
CCL28-203ENST00000513525 UBR3Q6ZT12 1888 aa13.48□□□□□ -0.25
CCL28-203ENST00000513525 ZBTB7AO95365 584 aa13.48□□□□□ -0.25
CCL28-203ENST00000513525 BMP2KQ9NSY1 1161 aaPredicted RBP13.48□□□□□ -0.25
CCL28-203ENST00000513525 CYP27B1O15528 508 aa13.47□□□□□ -0.25
CCL28-203ENST00000513525 EYA1Q99502 592 aa13.47□□□□□ -0.25
CCL28-203ENST00000513525 SGIP1Q9BQI5 828 aa13.47□□□□□ -0.25
CCL28-203ENST00000513525 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.47□□□□□ -0.25
CCL28-203ENST00000513525 C4BP0C0L5 1744 aa13.46□□□□□ -0.25
CCL28-203ENST00000513525 ZNF831Q5JPB2 1677 aa13.45□□□□□ -0.26
CCL28-203ENST00000513525 EIF4A2Q14240 407 aaKnown RBP13.45□□□□□ -0.26
CCL28-203ENST00000513525 NKX1-1Q15270 411 aaPredicted RBP13.45□□□□□ -0.26
CCL28-203ENST00000513525 LCE2DQ5TA82 110 aaPredicted RBP13.45□□□□□ -0.26
CCL28-203ENST00000513525 SPG7Q9UQ90 795 aa13.45□□□□□ -0.26
CCL28-203ENST00000513525 TNNT2P45379 298 aaPredicted RBP13.44□□□□□ -0.26
CCL28-203ENST00000513525 SLC16A10Q8TF71 515 aa13.44□□□□□ -0.26
CCL28-203ENST00000513525 PNPLA7Q6ZV29 1317 aa13.44□□□□□ -0.26
CCL28-203ENST00000513525 IGSF1Q8N6C5 1336 aa13.44□□□□□ -0.26
CCL28-203ENST00000513525 SCN11AQ9UI33 1791 aa13.44□□□□□ -0.26
CCL28-203ENST00000513525 CCNL1Q9UK58 526 aaPredicted RBP13.44□□□□□ -0.26
CCL28-203ENST00000513525 PALLDQ8WX93 1383 aa13.43□□□□□ -0.26
CCL28-203ENST00000513525 MAP3K5Q99683 1374 aa13.43□□□□□ -0.26
CCL28-203ENST00000513525 KIF7Q2M1P5 1343 aa13.43□□□□□ -0.26
CCL28-203ENST00000513525 HMGB2P26583 209 aaKnown RBP13.43□□□□□ -0.26
CCL28-203ENST00000513525 KNSTRNQ9Y448 316 aa13.43□□□□□ -0.26
CCL28-203ENST00000513525 COL5A3P25940 1745 aaPredicted RBP13.42□□□□□ -0.26
CCL28-203ENST00000513525 SEC24BO95487 1268 aa13.42□□□□□ -0.26
CCL28-203ENST00000513525 KCNQ4P56696 695 aa13.42□□□□□ -0.26
CCL28-203ENST00000513525 UTRNP46939 3433 aa13.42□□□□□ -0.26
CCL28-203ENST00000513525 MPRIPQ6WCQ1 1025 aa13.41□□□□□ -0.26
CCL28-203ENST00000513525 MORC1Q86VD1 984 aa13.41□□□□□ -0.26
CCL28-203ENST00000513525 IFNL2Q8IZJ0 200 aa13.41□□□□□ -0.26
CCL28-203ENST00000513525 TFCP2L1Q9NZI6 479 aa13.41□□□□□ -0.26
CCL28-203ENST00000513525 MAP3K13O43283 966 aa13.4□□□□□ -0.26
CCL28-203ENST00000513525 PHKG2P15735 406 aa13.4□□□□□ -0.26
CCL28-203ENST00000513525 AMER1Q5JTC6 1135 aaPredicted RBP13.4□□□□□ -0.26
CCL28-203ENST00000513525 SMARCC1Q92922 1105 aaPredicted RBP13.4□□□□□ -0.26
CCL28-203ENST00000513525 ARXQ96QS3 562 aa13.39□□□□□ -0.27
CCL28-203ENST00000513525 SYT17Q9BSW7 474 aa13.39□□□□□ -0.27
CCL28-203ENST00000513525 FHDC1Q9C0D6 1143 aaPredicted RBP13.39□□□□□ -0.27
CCL28-203ENST00000513525 CICQ96RK0 1608 aaPredicted RBP13.39□□□□□ -0.27
CCL28-203ENST00000513525 POTEFA5A3E0 1075 aa13.39□□□□□ -0.27
CCL28-203ENST00000513525 PIGBQ92521 554 aa13.39□□□□□ -0.27
CCL28-203ENST00000513525 KDRP35968 1356 aa13.38□□□□□ -0.27
CCL28-203ENST00000513525 PER1O15534 1290 aaPredicted RBP13.38□□□□□ -0.27
CCL28-203ENST00000513525 TMOD3Q9NYL9 352 aa13.37□□□□□ -0.27
CCL28-203ENST00000513525 MYH14Q7Z406 1995 aaKnown RBP13.36□□□□□ -0.27
CCL28-203ENST00000513525 POLD1P28340 1107 aa13.36□□□□□ -0.27
CCL28-203ENST00000513525 COL23A1Q86Y22 540 aaPredicted RBP13.36□□□□□ -0.27
CCL28-203ENST00000513525 MIER1Q8N108 512 aa13.36□□□□□ -0.27
CCL28-203ENST00000513525 FLAD1Q8NFF5 587 aa13.36□□□□□ -0.27
CCL28-203ENST00000513525 TRPC6Q9Y210 931 aa13.36□□□□□ -0.27
CCL28-203ENST00000513525 ADAMTS7Q9UKP4 1686 aa13.36□□□□□ -0.27
CCL28-203ENST00000513525 NPC1L1Q9UHC9 1359 aa13.36□□□□□ -0.27
CCL28-203ENST00000513525 KDM6AO15550 1401 aaPredicted RBP13.35□□□□□ -0.27
CCL28-203ENST00000513525 HSP90AB1P08238 724 aaKnown RBP13.35□□□□□ -0.27
CCL28-203ENST00000513525 AMOTQ4VCS5 1084 aa13.35□□□□□ -0.27
CCL28-203ENST00000513525 PLEKHO1Q53GL0 409 aaPredicted RBP13.35□□□□□ -0.27
CCL28-203ENST00000513525 GOLGB1Q14789 3259 aaKnown RBP13.35□□□□□ -0.27
CCL28-203ENST00000513525 C4AP0C0L4 1744 aa13.35□□□□□ -0.27
CCL28-203ENST00000513525 LOC102724428A0A0B4J2F2 783 aa13.34□□□□□ -0.27
CCL28-203ENST00000513525 ERVV-2B6SEH9 535 aa13.34□□□□□ -0.27
CCL28-203ENST00000513525 IL13P35225 146 aa13.34□□□□□ -0.27
CCL28-203ENST00000513525 SIK1P57059 783 aa13.34□□□□□ -0.27
CCL28-203ENST00000513525 IER5LQ5T953 404 aa13.34□□□□□ -0.27
CCL28-203ENST00000513525 DCAF5Q96JK2 942 aa13.34□□□□□ -0.27
CCL28-203ENST00000513525 TJP1Q07157 1748 aa13.34□□□□□ -0.27
CCL28-203ENST00000513525 TTLL13PA6NNM8 815 aa13.34□□□□□ -0.27
CCL28-203ENST00000513525 KIF13BQ9NQT8 1826 aa13.33□□□□□ -0.28
CCL28-203ENST00000513525 YY1P25490 414 aa13.33□□□□□ -0.28
CCL28-203ENST00000513525 AEBP1Q8IUX7 1158 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms