RNA–Protein interactions for RNA: ENST00000513405.1

AP001999.1-201, humanhuman

TSL 2 BASIC

Gene AP001999.1, Length 3,684 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001999.1-201ENST00000513405 SLC39A6Q13433 755 aa16.52■□□□□ 0.24
AP001999.1-201ENST00000513405 AACSQ86V21 672 aa16.52■□□□□ 0.24
AP001999.1-201ENST00000513405 JAKMIP1Q96N16 626 aaKnown RBP16.52■□□□□ 0.24
AP001999.1-201ENST00000513405 G3BP1Q13283 466 aaKnown RBP eCLIP16.51■□□□□ 0.23
AP001999.1-201ENST00000513405 CWF19L2Q2TBE0 894 aaKnown RBP16.51■□□□□ 0.23
AP001999.1-201ENST00000513405 NECAB1Q8N987 351 aa16.51■□□□□ 0.23
AP001999.1-201ENST00000513405 DNAJC2Q99543 621 aaKnown RBP16.51■□□□□ 0.23
AP001999.1-201ENST00000513405 CEP152O94986 1710 aa16.51■□□□□ 0.23
AP001999.1-201ENST00000513405 NBPF7P0C2Y1 421 aaPredicted RBP16.51■□□□□ 0.23
AP001999.1-201ENST00000513405 NEUROD6Q96NK8 337 aa16.51■□□□□ 0.23
AP001999.1-201ENST00000513405 KLHDC4Q8TBB5 520 aa16.5■□□□□ 0.23
AP001999.1-201ENST00000513405 ESYT1Q9BSJ8 1104 aa16.5■□□□□ 0.23
AP001999.1-201ENST00000513405 FSD1Q9BTV5 496 aa16.5■□□□□ 0.23
AP001999.1-201ENST00000513405 RBSNQ9H1K0 784 aa16.5■□□□□ 0.23
AP001999.1-201ENST00000513405 KCNA6P17658 529 aa16.5■□□□□ 0.23
AP001999.1-201ENST00000513405 ZMYM3Q14202 1370 aa16.5■□□□□ 0.23
AP001999.1-201ENST00000513405 PPRC1Q5VV67 1664 aaKnown RBP16.5■□□□□ 0.23
AP001999.1-201ENST00000513405 SYAP1Q96A49 352 aaPredicted RBP16.5■□□□□ 0.23
AP001999.1-201ENST00000513405 NDUFB9Q9Y6M9 179 aa16.5■□□□□ 0.23
AP001999.1-201ENST00000513405 ZNF853P0CG23 659 aa16.49■□□□□ 0.23
AP001999.1-201ENST00000513405 KLHL40Q2TBA0 621 aa16.49■□□□□ 0.23
AP001999.1-201ENST00000513405 CNTROBQ8N137 903 aa16.49■□□□□ 0.23
AP001999.1-201ENST00000513405 NSFL1CQ9UNZ2 370 aaKnown RBP16.49■□□□□ 0.23
AP001999.1-201ENST00000513405 IQGAP1P46940 1657 aa16.49■□□□□ 0.23
AP001999.1-201ENST00000513405 CAMK4Q16566 473 aa16.49■□□□□ 0.23
AP001999.1-201ENST00000513405 PTPRCP08575 1304 aa16.49■□□□□ 0.23
AP001999.1-201ENST00000513405 ABCC3O15438 1527 aa16.48■□□□□ 0.23
AP001999.1-201ENST00000513405 CCDC173Q0VFZ6 552 aa16.48■□□□□ 0.23
AP001999.1-201ENST00000513405 KIAA2012Q0VF49 1180 aa16.48■□□□□ 0.23
AP001999.1-201ENST00000513405 FAM173BQ6P4H8 233 aa16.48■□□□□ 0.23
AP001999.1-201ENST00000513405 GPATCH3Q96I76 525 aa16.48■□□□□ 0.23
AP001999.1-201ENST00000513405 PRDM10Q9NQV6 1147 aa16.48■□□□□ 0.23
AP001999.1-201ENST00000513405 RTL1A6NKG5 1358 aa16.48■□□□□ 0.23
AP001999.1-201ENST00000513405 IL17REQ8NFR9 667 aa16.48■□□□□ 0.23
AP001999.1-201ENST00000513405 ZKSCAN1P17029 563 aaPredicted RBP16.47■□□□□ 0.23
AP001999.1-201ENST00000513405 RHPN1Q8TCX5 695 aa16.47■□□□□ 0.23
AP001999.1-201ENST00000513405 CWC22Q9HCG8 908 aaKnown RBP16.47■□□□□ 0.23
AP001999.1-201ENST00000513405 USP25Q9UHP3 1055 aa16.47■□□□□ 0.23
AP001999.1-201ENST00000513405 ERBB4Q15303 1308 aa16.47■□□□□ 0.23
AP001999.1-201ENST00000513405 TFIP11Q9UBB9 837 aaKnown RBP16.47■□□□□ 0.23
AP001999.1-201ENST00000513405 DDX11Q96FC9 970 aa16.47■□□□□ 0.23
AP001999.1-201ENST00000513405 CHMLP26374 656 aa16.46■□□□□ 0.23
AP001999.1-201ENST00000513405 DNAAF4Q8WXU2 420 aa16.46■□□□□ 0.23
AP001999.1-201ENST00000513405 CNPY2Q9Y2B0 182 aa16.46■□□□□ 0.23
AP001999.1-201ENST00000513405 MAP3K2Q9Y2U5 619 aa16.46■□□□□ 0.23
AP001999.1-201ENST00000513405 GADD45BO75293 160 aaPredicted RBP16.46■□□□□ 0.23
AP001999.1-201ENST00000513405 GLI2P10070 1586 aa16.46■□□□□ 0.23
AP001999.1-201ENST00000513405 ATP5J2-PTCD1G3V325 749 aa16.46■□□□□ 0.22
AP001999.1-201ENST00000513405 PTCD1O75127 700 aaKnown RBP16.46■□□□□ 0.22
AP001999.1-201ENST00000513405 FSD2A1L4K1 749 aa16.45■□□□□ 0.22
AP001999.1-201ENST00000513405 TSPY26PQ9H489 355 aa16.45■□□□□ 0.22
AP001999.1-201ENST00000513405 ROBO2Q9HCK4 1378 aa16.45■□□□□ 0.22
AP001999.1-201ENST00000513405 FAM177BA6PVY3 158 aa16.45■□□□□ 0.22
AP001999.1-201ENST00000513405 ATP8B2P98198 1209 aa16.45■□□□□ 0.22
AP001999.1-201ENST00000513405 LRRC2Q9BYS8 371 aa16.45■□□□□ 0.22
AP001999.1-201ENST00000513405 ZMYND15Q9H091 742 aa16.45■□□□□ 0.22
AP001999.1-201ENST00000513405 TMEM63CQ9P1W3 806 aa16.45■□□□□ 0.22
AP001999.1-201ENST00000513405 PRAMEF22A3QJZ6 481 aa16.44■□□□□ 0.22
AP001999.1-201ENST00000513405 QRICH2Q9H0J4 1663 aa16.44■□□□□ 0.22
AP001999.1-201ENST00000513405 ZFYVE9O95405 1425 aa16.44■□□□□ 0.22
AP001999.1-201ENST00000513405 CLCN1P35523 988 aa16.44■□□□□ 0.22
AP001999.1-201ENST00000513405 ZSCAN30Q86W11 494 aa16.44■□□□□ 0.22
AP001999.1-201ENST00000513405 LMBRD1Q9NUN5 540 aa16.44■□□□□ 0.22
AP001999.1-201ENST00000513405 PHF8Q9UPP1 1060 aa16.44■□□□□ 0.22
AP001999.1-201ENST00000513405 EDC4Q6P2E9 1401 aaKnown RBP16.44■□□□□ 0.22
AP001999.1-201ENST00000513405 TNRQ92752 1358 aa16.44■□□□□ 0.22
AP001999.1-201ENST00000513405 GORABQ5T7V8 394 aa16.44■□□□□ 0.22
AP001999.1-201ENST00000513405 LAMC1P11047 1609 aa16.44■□□□□ 0.22
AP001999.1-201ENST00000513405 HCLS1P14317 486 aaPredicted RBP16.43■□□□□ 0.22
AP001999.1-201ENST00000513405 NEXNQ0ZGT2 675 aa16.43■□□□□ 0.22
AP001999.1-201ENST00000513405 GIMAP6Q6P9H5 292 aa16.43■□□□□ 0.22
AP001999.1-201ENST00000513405 THEMISQ8N1K5 641 aaPredicted RBP16.43■□□□□ 0.22
AP001999.1-201ENST00000513405 C17orf53Q8N3J3 647 aaPredicted RBP16.43■□□□□ 0.22
AP001999.1-201ENST00000513405 USP44Q9H0E7 712 aa16.43■□□□□ 0.22
AP001999.1-201ENST00000513405 SHROOM2Q13796 1616 aa16.43■□□□□ 0.22
AP001999.1-201ENST00000513405 STK11IPQ8N1F8 1099 aa16.43■□□□□ 0.22
AP001999.1-201ENST00000513405 BICD2Q8TD16 824 aa16.43■□□□□ 0.22
AP001999.1-201ENST00000513405 RAPGEF4Q8WZA2 1011 aa16.43■□□□□ 0.22
AP001999.1-201ENST00000513405 IQSEC2Q5JU85 1478 aa16.43■□□□□ 0.22
AP001999.1-201ENST00000513405 MLH3Q9UHC1 1453 aa16.43■□□□□ 0.22
AP001999.1-201ENST00000513405 H3BQV1 296 aa16.43■□□□□ 0.22
AP001999.1-201ENST00000513405 IFFO2Q5TF58 517 aa16.43■□□□□ 0.22
AP001999.1-201ENST00000513405 USP48Q86UV5 1035 aa16.43■□□□□ 0.22
AP001999.1-201ENST00000513405 CABLES1Q8TDN4 633 aa16.43■□□□□ 0.22
AP001999.1-201ENST00000513405 KIF1BPQ96EK5 621 aa16.43■□□□□ 0.22
AP001999.1-201ENST00000513405 EDC3Q96F86 508 aaKnown RBP16.43■□□□□ 0.22
AP001999.1-201ENST00000513405 FAM135BQ49AJ0 1406 aa16.42■□□□□ 0.22
AP001999.1-201ENST00000513405 HOXC9P31274 260 aa16.42■□□□□ 0.22
AP001999.1-201ENST00000513405 CHRNA2Q15822 529 aa16.42■□□□□ 0.22
AP001999.1-201ENST00000513405 ADGRB3O60242 1522 aa16.42■□□□□ 0.22
AP001999.1-201ENST00000513405 GPT2Q8TD30 523 aa16.42■□□□□ 0.22
AP001999.1-201ENST00000513405 RUFY2Q8WXA3 655 aa16.42■□□□□ 0.22
AP001999.1-201ENST00000513405 PDRG1Q9NUG6 133 aa16.42■□□□□ 0.22
AP001999.1-201ENST00000513405 NBPF6Q5VWK0 638 aa16.42■□□□□ 0.22
AP001999.1-201ENST00000513405 AEBP2Q6ZN18 517 aaPredicted RBP16.42■□□□□ 0.22
AP001999.1-201ENST00000513405 DDX17Q92841 729 aaKnown RBP16.42■□□□□ 0.22
AP001999.1-201ENST00000513405 NBPF4Q96M43 638 aa16.42■□□□□ 0.22
AP001999.1-201ENST00000513405 PLEKHO1Q53GL0 409 aaPredicted RBP16.41■□□□□ 0.22
AP001999.1-201ENST00000513405 CKAP2LQ8IYA6 745 aa16.41■□□□□ 0.22
AP001999.1-201ENST00000513405 TTC5Q8N0Z6 440 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms