RNA–Protein interactions for RNA: ENST00000513064.1

CHD1-210, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-210ENST00000513064 TPCN2Q8NHX9 752 aa9.09□□□□□ -0.95
CHD1-210ENST00000513064 FHDC1Q9C0D6 1143 aaPredicted RBP9.09□□□□□ -0.95
CHD1-210ENST00000513064 FAM196BA6NMK8 535 aa9.08□□□□□ -0.96
CHD1-210ENST00000513064 CRTC2Q53ET0 693 aaPredicted RBP9.08□□□□□ -0.96
CHD1-210ENST00000513064 SLC27A3Q5K4L6 730 aa9.07□□□□□ -0.96
CHD1-210ENST00000513064 LYSMD3Q7Z3D4 306 aa9.07□□□□□ -0.96
CHD1-210ENST00000513064 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.07□□□□□ -0.96
CHD1-210ENST00000513064 ZNF594Q96JF6 807 aaPredicted RBP9.07□□□□□ -0.96
CHD1-210ENST00000513064 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.06□□□□□ -0.96
CHD1-210ENST00000513064 BACH1O14867 736 aa9.06□□□□□ -0.96
CHD1-210ENST00000513064 SMTNP53814 917 aa9.06□□□□□ -0.96
CHD1-210ENST00000513064 PRICKLE2Q7Z3G6 844 aa9.06□□□□□ -0.96
CHD1-210ENST00000513064 PBXIP1Q96AQ6 731 aa9.06□□□□□ -0.96
CHD1-210ENST00000513064 ZNF358Q9NW07 568 aa9.06□□□□□ -0.96
CHD1-210ENST00000513064 SPATA31C2B4DYI2 1134 aa9.05□□□□□ -0.96
CHD1-210ENST00000513064 USP17L15C9J2P7 530 aa9.05□□□□□ -0.96
CHD1-210ENST00000513064 USP17L10C9JJH3 530 aa9.05□□□□□ -0.96
CHD1-210ENST00000513064 USP17L13C9JLJ4 530 aa9.05□□□□□ -0.96
CHD1-210ENST00000513064 USP17L12C9JPN9 530 aa9.05□□□□□ -0.96
CHD1-210ENST00000513064 USP17L11C9JVI0 530 aa9.05□□□□□ -0.96
CHD1-210ENST00000513064 USP17L21D6R901 530 aa9.05□□□□□ -0.96
CHD1-210ENST00000513064 USP17L18D6R9N7 530 aa9.05□□□□□ -0.96
CHD1-210ENST00000513064 USP17L22D6RA61 530 aa9.05□□□□□ -0.96
CHD1-210ENST00000513064 USP17L17D6RBQ6 530 aa9.05□□□□□ -0.96
CHD1-210ENST00000513064 USP17L19D6RCP7 530 aa9.05□□□□□ -0.96
CHD1-210ENST00000513064 USP17L20D6RJB6 530 aa9.05□□□□□ -0.96
CHD1-210ENST00000513064 USP17L24Q0WX57 530 aa9.05□□□□□ -0.96
CHD1-210ENST00000513064 MTFR1Q15390 333 aa9.05□□□□□ -0.96
CHD1-210ENST00000513064 TLR1Q15399 786 aa9.05□□□□□ -0.96
CHD1-210ENST00000513064 CDCA8Q53HL2 280 aa9.05□□□□□ -0.96
CHD1-210ENST00000513064 WDR44Q5JSH3 913 aa9.05□□□□□ -0.96
CHD1-210ENST00000513064 ZSCAN10Q96SZ4 725 aaPredicted RBP9.05□□□□□ -0.96
CHD1-210ENST00000513064 SERTAD1Q9UHV2 236 aa9.05□□□□□ -0.96
CHD1-210ENST00000513064 A6NJY4 79 aa9.04□□□□□ -0.96
CHD1-210ENST00000513064 M0R2N6 131 aa9.04□□□□□ -0.96
CHD1-210ENST00000513064 PPARGC1BQ86YN6 1023 aaKnown RBP9.04□□□□□ -0.96
CHD1-210ENST00000513064 ANKMY2Q8IV38 441 aa9.04□□□□□ -0.96
CHD1-210ENST00000513064 ARXQ96QS3 562 aa9.04□□□□□ -0.96
CHD1-210ENST00000513064 CDK2AP1O14519 115 aa9.03□□□□□ -0.96
CHD1-210ENST00000513064 ATG7O95352 703 aa9.03□□□□□ -0.96
CHD1-210ENST00000513064 EPHA4P54764 986 aa9.03□□□□□ -0.96
CHD1-210ENST00000513064 SEC13P55735 322 aa9.03□□□□□ -0.96
CHD1-210ENST00000513064 PTSQ03393 145 aa9.03□□□□□ -0.96
CHD1-210ENST00000513064 DPYDQ12882 1025 aa9.03□□□□□ -0.96
CHD1-210ENST00000513064 RBM19Q9Y4C8 960 aaKnown RBP9.03□□□□□ -0.96
CHD1-210ENST00000513064 SFI1A8K8P3 1242 aa9.02□□□□□ -0.97
CHD1-210ENST00000513064 PPP1R15AO75807 674 aaPredicted RBP9.02□□□□□ -0.97
CHD1-210ENST00000513064 POU4F2Q12837 409 aa9.02□□□□□ -0.97
CHD1-210ENST00000513064 ELOAQ14241 798 aaKnown RBP9.02□□□□□ -0.97
CHD1-210ENST00000513064 NBPF10Q6P3W6 841 aaKnown RBP9.02□□□□□ -0.97
CHD1-210ENST00000513064 ZNF295-AS1Q8N0V1 137 aa9.02□□□□□ -0.97
CHD1-210ENST00000513064 NBPF15Q8N660 670 aa9.02□□□□□ -0.97
CHD1-210ENST00000513064 SCHIP1Q9P0W5 487 aaPredicted RBP9.02□□□□□ -0.97
CHD1-210ENST00000513064 IQSEC3Q9UPP2 1182 aaPredicted RBP9.02□□□□□ -0.97
CHD1-210ENST00000513064 SENP3-EIF4A1A0A087X0R7 540 aa9.01□□□□□ -0.97
CHD1-210ENST00000513064 FOXK2Q01167 660 aa9.01□□□□□ -0.97
CHD1-210ENST00000513064 TMEM214Q6NUQ4 689 aaKnown RBP9.01□□□□□ -0.97
CHD1-210ENST00000513064 TAS1R3Q7RTX0 852 aa9.01□□□□□ -0.97
CHD1-210ENST00000513064 SLC35F4A4IF30 521 aa9□□□□□ -0.97
CHD1-210ENST00000513064 RHOQP17081 205 aa9□□□□□ -0.97
CHD1-210ENST00000513064 GTF2E1P29083 439 aaPredicted RBP9□□□□□ -0.97
CHD1-210ENST00000513064 GNASQ5JWF2 1037 aa9□□□□□ -0.97
CHD1-210ENST00000513064 TNS4Q8IZW8 715 aa9□□□□□ -0.97
CHD1-210ENST00000513064 TSEN2Q8NCE0 465 aaKnown RBP9□□□□□ -0.97
CHD1-210ENST00000513064 RHBDD1Q8TEB9 315 aa9□□□□□ -0.97
CHD1-210ENST00000513064 NXF1Q9UBU9 619 aaKnown RBP9□□□□□ -0.97
CHD1-210ENST00000513064 NOVA2Q9UNW9 492 aaKnown RBP9□□□□□ -0.97
CHD1-210ENST00000513064 C4orf17Q53FE4 359 aa8.99□□□□□ -0.97
CHD1-210ENST00000513064 NPAS3Q8IXF0 933 aa8.99□□□□□ -0.97
CHD1-210ENST00000513064 FAM200AQ8TCP9 573 aa8.99□□□□□ -0.97
CHD1-210ENST00000513064 USP3Q9Y6I4 520 aa8.99□□□□□ -0.97
CHD1-210ENST00000513064 CCDC155Q8N6L0 562 aa8.98□□□□□ -0.97
CHD1-210ENST00000513064 NIFKQ9BYG3 293 aaKnown RBP8.98□□□□□ -0.97
CHD1-210ENST00000513064 ZMIZ1Q9ULJ6 1067 aa8.98□□□□□ -0.97
CHD1-210ENST00000513064 DYRK1BQ9Y463 629 aa8.98□□□□□ -0.97
CHD1-210ENST00000513064 PPFIA3O75145 1194 aa8.97□□□□□ -0.97
CHD1-210ENST00000513064 ZNF775Q96BV0 537 aaPredicted RBP8.97□□□□□ -0.97
CHD1-210ENST00000513064 ARID3AQ99856 593 aa8.97□□□□□ -0.97
CHD1-210ENST00000513064 TIMMDC1Q9NPL8 285 aa8.97□□□□□ -0.97
CHD1-210ENST00000513064 TERTO14746 1132 aaKnown RBP8.96□□□□□ -0.98
CHD1-210ENST00000513064 SLC9A9Q8IVB4 645 aa8.96□□□□□ -0.98
CHD1-210ENST00000513064 PHKA2P46019 1235 aa8.95□□□□□ -0.98
CHD1-210ENST00000513064 FAM69CQ0P6D2 419 aa8.95□□□□□ -0.98
CHD1-210ENST00000513064 STK32AQ8WU08 396 aa8.95□□□□□ -0.98
CHD1-210ENST00000513064 HINFPQ9BQA5 517 aa8.95□□□□□ -0.98
CHD1-210ENST00000513064 TSPAN10Q9H1Z9 355 aaPredicted RBP8.95□□□□□ -0.98
CHD1-210ENST00000513064 ACIN1Q9UKV3 1341 aaKnown RBP8.95□□□□□ -0.98
CHD1-210ENST00000513064 A0A1B0GTH6 734 aa8.94□□□□□ -0.98
CHD1-210ENST00000513064 H3BM21 787 aa8.94□□□□□ -0.98
CHD1-210ENST00000513064 C21orf2O43822 256 aa8.94□□□□□ -0.98
CHD1-210ENST00000513064 TEAD4Q15561 434 aa8.94□□□□□ -0.98
CHD1-210ENST00000513064 SWI5Q1ZZU3 235 aa8.94□□□□□ -0.98
CHD1-210ENST00000513064 F11P03951 625 aa8.93□□□□□ -0.98
CHD1-210ENST00000513064 ITGA6P23229 1130 aa8.93□□□□□ -0.98
CHD1-210ENST00000513064 TBCELQ5QJ74 424 aa8.93□□□□□ -0.98
CHD1-210ENST00000513064 POTEAQ6S8J7 498 aa8.93□□□□□ -0.98
CHD1-210ENST00000513064 GAS2L2Q8NHY3 880 aa8.93□□□□□ -0.98
CHD1-210ENST00000513064 CABP1Q9NZU7 370 aa8.93□□□□□ -0.98
CHD1-210ENST00000513064 ATAD2Q6PL18 1390 aa8.92□□□□□ -0.98
CHD1-210ENST00000513064 NOS2P35228 1153 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms