RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 AK7Q96M32 723 aa8.75□□□□□ -1.01
KDM3B-208ENST00000512928 ASAP1Q9ULH1 1129 aa8.75□□□□□ -1.01
KDM3B-208ENST00000512928 UTRNP46939 3433 aa8.75□□□□□ -1.01
KDM3B-208ENST00000512928 PNPLA7Q6ZV29 1317 aa8.75□□□□□ -1.01
KDM3B-208ENST00000512928 KDRP35968 1356 aa8.74□□□□□ -1.01
KDM3B-208ENST00000512928 PLEKHG2Q9H7P9 1386 aa8.74□□□□□ -1.01
KDM3B-208ENST00000512928 DCAF8L1A6NGE4 600 aa8.74□□□□□ -1.01
KDM3B-208ENST00000512928 PHF14O94880 888 aa8.74□□□□□ -1.01
KDM3B-208ENST00000512928 POLD1P28340 1107 aa8.74□□□□□ -1.01
KDM3B-208ENST00000512928 ATP6V1AP38606 617 aa8.74□□□□□ -1.01
KDM3B-208ENST00000512928 SMIM5Q71RC9 77 aa8.74□□□□□ -1.01
KDM3B-208ENST00000512928 RBM42Q9BTD8 480 aaKnown RBP8.74□□□□□ -1.01
KDM3B-208ENST00000512928 RNF216Q9NWF9 866 aaPredicted RBP8.74□□□□□ -1.01
KDM3B-208ENST00000512928 WWC3Q9ULE0 1092 aa8.74□□□□□ -1.01
KDM3B-208ENST00000512928 KDM6AO15550 1401 aaPredicted RBP8.73□□□□□ -1.01
KDM3B-208ENST00000512928 LOC102724428A0A0B4J2F2 783 aa8.73□□□□□ -1.01
KDM3B-208ENST00000512928 ERVV-2B6SEH9 535 aa8.73□□□□□ -1.01
KDM3B-208ENST00000512928 SIK1P57059 783 aa8.73□□□□□ -1.01
KDM3B-208ENST00000512928 MSL1Q68DK7 614 aa8.73□□□□□ -1.01
KDM3B-208ENST00000512928 ARXQ96QS3 562 aa8.73□□□□□ -1.01
KDM3B-208ENST00000512928 ATG3Q9NT62 314 aa8.73□□□□□ -1.01
KDM3B-208ENST00000512928 COL3A1P02461 1466 aaPredicted RBP8.72□□□□□ -1.01
KDM3B-208ENST00000512928 C4BP0C0L5 1744 aa8.72□□□□□ -1.01
KDM3B-208ENST00000512928 GNPATO15228 680 aa8.72□□□□□ -1.01
KDM3B-208ENST00000512928 HMGB2P26583 209 aaKnown RBP8.72□□□□□ -1.01
KDM3B-208ENST00000512928 PPP2R1AP30153 589 aa8.72□□□□□ -1.01
KDM3B-208ENST00000512928 AKAP4Q5JQC9 854 aa8.72□□□□□ -1.01
KDM3B-208ENST00000512928 COL23A1Q86Y22 540 aaPredicted RBP8.72□□□□□ -1.01
KDM3B-208ENST00000512928 NFATC2IPQ8NCF5 419 aa8.72□□□□□ -1.01
KDM3B-208ENST00000512928 NUDCQ9Y266 331 aa8.72□□□□□ -1.01
KDM3B-208ENST00000512928 PTCD1O75127 700 aaKnown RBP8.71□□□□□ -1.02
KDM3B-208ENST00000512928 U2AF1L5P0DN76 240 aaPredicted RBP8.71□□□□□ -1.02
KDM3B-208ENST00000512928 YBX3P16989 372 aaKnown RBP eCLIP8.71□□□□□ -1.02
KDM3B-208ENST00000512928 U2AF1Q01081 240 aaKnown RBP eCLIP8.71□□□□□ -1.02
KDM3B-208ENST00000512928 ITPK1Q13572 414 aa8.71□□□□□ -1.02
KDM3B-208ENST00000512928 MTHFSDQ2M296 383 aaKnown RBP8.71□□□□□ -1.02
KDM3B-208ENST00000512928 AMIGO3Q86WK7 504 aa8.71□□□□□ -1.02
KDM3B-208ENST00000512928 LINC00116Q8NCU8 138 aa8.71□□□□□ -1.02
KDM3B-208ENST00000512928 SLC16A10Q8TF71 515 aa8.71□□□□□ -1.02
KDM3B-208ENST00000512928 TAF1LQ8IZX4 1826 aa8.7□□□□□ -1.02
KDM3B-208ENST00000512928 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.7□□□□□ -1.02
KDM3B-208ENST00000512928 C1QTNF8P60827 252 aa8.7□□□□□ -1.02
KDM3B-208ENST00000512928 DDX10Q13206 875 aaKnown RBP8.7□□□□□ -1.02
KDM3B-208ENST00000512928 GPR162Q16538 588 aa8.7□□□□□ -1.02
KDM3B-208ENST00000512928 FLAD1Q8NFF5 587 aa8.7□□□□□ -1.02
KDM3B-208ENST00000512928 LGR6Q9HBX8 967 aa8.7□□□□□ -1.02
KDM3B-208ENST00000512928 PRKAR2BP31323 418 aa8.69□□□□□ -1.02
KDM3B-208ENST00000512928 GAS2L2Q8NHY3 880 aa8.69□□□□□ -1.02
KDM3B-208ENST00000512928 SLC52A2Q9HAB3 445 aa8.69□□□□□ -1.02
KDM3B-208ENST00000512928 MAP3K5Q99683 1374 aa8.69□□□□□ -1.02
KDM3B-208ENST00000512928 SCN11AQ9UI33 1791 aa8.68□□□□□ -1.02
KDM3B-208ENST00000512928 RNMTO43148 476 aaKnown RBP8.68□□□□□ -1.02
KDM3B-208ENST00000512928 NEFMP07197 916 aa8.68□□□□□ -1.02
KDM3B-208ENST00000512928 SSFA2P28290 1259 aa8.68□□□□□ -1.02
KDM3B-208ENST00000512928 TEFQ10587 303 aa8.68□□□□□ -1.02
KDM3B-208ENST00000512928 RTCBQ9Y3I0 505 aaKnown RBP8.68□□□□□ -1.02
KDM3B-208ENST00000512928 GNAT3A8MTJ3 354 aa8.67□□□□□ -1.02
KDM3B-208ENST00000512928 SLC39A6Q13433 755 aa8.67□□□□□ -1.02
KDM3B-208ENST00000512928 TTC5Q8N0Z6 440 aa8.67□□□□□ -1.02
KDM3B-208ENST00000512928 SLC4A9Q96Q91 983 aa8.67□□□□□ -1.02
KDM3B-208ENST00000512928 RSPH6AQ9H0K4 717 aa8.67□□□□□ -1.02
KDM3B-208ENST00000512928 UBR3Q6ZT12 1888 aa8.66□□□□□ -1.02
KDM3B-208ENST00000512928 MRC1P22897 1456 aa8.66□□□□□ -1.02
KDM3B-208ENST00000512928 TRAPPC3LQ5T215 181 aa8.66□□□□□ -1.02
KDM3B-208ENST00000512928 ZNF526Q8TF50 670 aaPredicted RBP8.66□□□□□ -1.02
KDM3B-208ENST00000512928 RTF1Q92541 710 aaKnown RBP8.66□□□□□ -1.02
KDM3B-208ENST00000512928 PHACTR3Q96KR7 559 aa8.66□□□□□ -1.02
KDM3B-208ENST00000512928 VIRMAQ69YN4 1812 aaKnown RBP8.66□□□□□ -1.02
KDM3B-208ENST00000512928 COL5A3P25940 1745 aaPredicted RBP8.66□□□□□ -1.02
KDM3B-208ENST00000512928 ATP10DQ9P241 1426 aa8.65□□□□□ -1.02
KDM3B-208ENST00000512928 CNTNAP4Q9C0A0 1308 aa8.65□□□□□ -1.02
KDM3B-208ENST00000512928 GIGYF1O75420 1035 aaPredicted RBP8.65□□□□□ -1.02
KDM3B-208ENST00000512928 RFC4P35249 363 aa8.65□□□□□ -1.02
KDM3B-208ENST00000512928 CRKLP46109 303 aaKnown RBP8.65□□□□□ -1.02
KDM3B-208ENST00000512928 TJP1Q07157 1748 aa8.65□□□□□ -1.03
KDM3B-208ENST00000512928 ZNF831Q5JPB2 1677 aa8.65□□□□□ -1.03
KDM3B-208ENST00000512928 MAPK8IP3Q9UPT6 1336 aa8.64□□□□□ -1.03
KDM3B-208ENST00000512928 FCHSD2O94868 740 aa8.64□□□□□ -1.03
KDM3B-208ENST00000512928 RALBP1Q15311 655 aa8.64□□□□□ -1.03
KDM3B-208ENST00000512928 MCM10Q7L590 875 aa8.64□□□□□ -1.03
KDM3B-208ENST00000512928 DNAJC10Q8IXB1 793 aa8.64□□□□□ -1.03
KDM3B-208ENST00000512928 IL17REQ8NFR9 667 aa8.64□□□□□ -1.03
KDM3B-208ENST00000512928 ARHGEF1Q92888 912 aaKnown RBP8.64□□□□□ -1.03
KDM3B-208ENST00000512928 GOLGB1Q14789 3259 aaKnown RBP8.64□□□□□ -1.03
KDM3B-208ENST00000512928 N4BP2Q86UW6 1770 aaPredicted RBP8.63□□□□□ -1.03
KDM3B-208ENST00000512928 KIAA1551Q9HCM1 1747 aa8.63□□□□□ -1.03
KDM3B-208ENST00000512928 ADAMTS7Q9UKP4 1686 aa8.63□□□□□ -1.03
KDM3B-208ENST00000512928 BTBD11A6QL63 1104 aa8.63□□□□□ -1.03
KDM3B-208ENST00000512928 RPS6KA4O75676 772 aa8.63□□□□□ -1.03
KDM3B-208ENST00000512928 MMP10P09238 476 aa8.63□□□□□ -1.03
KDM3B-208ENST00000512928 RC3H1Q5TC82 1133 aaKnown RBP8.63□□□□□ -1.03
KDM3B-208ENST00000512928 CCDC87Q9NVE4 849 aa8.63□□□□□ -1.03
KDM3B-208ENST00000512928 ZNF330Q9Y3S2 320 aaPredicted RBP8.63□□□□□ -1.03
KDM3B-208ENST00000512928 KCPQ6ZWJ8 1503 aa8.63□□□□□ -1.03
KDM3B-208ENST00000512928 MYBBP1AQ9BQG0 1328 aaKnown RBP8.62□□□□□ -1.03
KDM3B-208ENST00000512928 CANXP27824 592 aaKnown RBP8.62□□□□□ -1.03
KDM3B-208ENST00000512928 DCTN1Q14203 1278 aa8.62□□□□□ -1.03
KDM3B-208ENST00000512928 ZNF790Q6PG37 636 aa8.62□□□□□ -1.03
KDM3B-208ENST00000512928 SRP68Q9UHB9 627 aaKnown RBP8.62□□□□□ -1.03
KDM3B-208ENST00000512928 C4AP0C0L4 1744 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms