RNA–Protein interactions for RNA: ENST00000512768.1

NME1-210, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 1 (best)

Gene NME1, Length 1,056 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-210ENST00000512768 RGS12O14924 1447 aa23.34■■□□□ 1.33
NME1-210ENST00000512768 DOT1LQ8TEK3 1739 aa23.34■■□□□ 1.33
NME1-210ENST00000512768 CHL1O00533 1208 aa23.34■■□□□ 1.33
NME1-210ENST00000512768 KRT27Q7Z3Y8 459 aa23.34■■□□□ 1.33
NME1-210ENST00000512768 TRMT2AQ8IZ69 625 aaKnown RBP23.34■■□□□ 1.33
NME1-210ENST00000512768 NFATC2IPQ8NCF5 419 aa23.34■■□□□ 1.33
NME1-210ENST00000512768 TSR2Q969E8 191 aaKnown RBP23.34■■□□□ 1.33
NME1-210ENST00000512768 MIS18AQ9NYP9 233 aa23.34■■□□□ 1.33
NME1-210ENST00000512768 FAM182BQ5T319 152 aa23.33■■□□□ 1.33
NME1-210ENST00000512768 DUSP27Q5VZP5 1158 aa23.33■■□□□ 1.33
NME1-210ENST00000512768 MBIPQ9NS73 344 aa23.33■■□□□ 1.33
NME1-210ENST00000512768 TSPYL4Q9UJ04 414 aa23.33■■□□□ 1.33
NME1-210ENST00000512768 ITGB4P16144 1822 aa23.33■■□□□ 1.32
NME1-210ENST00000512768 FANCIQ9NVI1 1328 aa23.33■■□□□ 1.32
NME1-210ENST00000512768 BABAM1Q9NWV8 329 aa23.32■■□□□ 1.32
NME1-210ENST00000512768 BTBD11A6QL63 1104 aa23.31■■□□□ 1.32
NME1-210ENST00000512768 ACSBG1Q96GR2 724 aa23.31■■□□□ 1.32
NME1-210ENST00000512768 TMOD3Q9NYL9 352 aa23.31■■□□□ 1.32
NME1-210ENST00000512768 PRIM1P49642 420 aaKnown RBP23.3■■□□□ 1.32
NME1-210ENST00000512768 SYTL4Q96C24 671 aaPredicted RBP23.29■■□□□ 1.32
NME1-210ENST00000512768 KDM3BQ7LBC6 1761 aa23.29■■□□□ 1.32
NME1-210ENST00000512768 BCL9O00512 1426 aa23.28■■□□□ 1.32
NME1-210ENST00000512768 CENPBP07199 599 aaPredicted RBP23.27■■□□□ 1.32
NME1-210ENST00000512768 PIGBQ92521 554 aa23.27■■□□□ 1.32
NME1-210ENST00000512768 KCNQ3O43525 872 aa23.26■■□□□ 1.31
NME1-210ENST00000512768 SLC39A6Q13433 755 aa23.26■■□□□ 1.31
NME1-210ENST00000512768 EXOSC9Q06265 439 aaKnown RBP23.25■■□□□ 1.31
NME1-210ENST00000512768 FAM196AQ6ZSG2 479 aa23.25■■□□□ 1.31
NME1-210ENST00000512768 SBF2Q86WG5 1849 aa23.24■■□□□ 1.31
NME1-210ENST00000512768 KCNQ2O43526 872 aa23.24■■□□□ 1.31
NME1-210ENST00000512768 NHSQ6T4R5 1651 aa23.23■■□□□ 1.31
NME1-210ENST00000512768 ZNF790Q6PG37 636 aa23.23■■□□□ 1.31
NME1-210ENST00000512768 PAPPAQ13219 1627 aa23.22■■□□□ 1.31
NME1-210ENST00000512768 TTC5Q8N0Z6 440 aa23.22■■□□□ 1.31
NME1-210ENST00000512768 EIF4A1P60842 406 aaKnown RBP23.21■■□□□ 1.31
NME1-210ENST00000512768 C8orf58Q8NAV2 365 aa23.21■■□□□ 1.31
NME1-210ENST00000512768 ATG3Q9NT62 314 aa23.21■■□□□ 1.31
NME1-210ENST00000512768 ASAP1Q9ULH1 1129 aa23.21■■□□□ 1.31
NME1-210ENST00000512768 KRT24Q2M2I5 525 aa23.2■■□□□ 1.3
NME1-210ENST00000512768 PTF1AQ7RTS3 328 aa23.19■■□□□ 1.3
NME1-210ENST00000512768 ELL2O00472 640 aaPredicted RBP23.18■■□□□ 1.3
NME1-210ENST00000512768 TSPYL6Q8N831 410 aa23.18■■□□□ 1.3
NME1-210ENST00000512768 ZNF496Q96IT1 587 aaPredicted RBP23.18■■□□□ 1.3
NME1-210ENST00000512768 UBR2Q8IWV8 1755 aa23.18■■□□□ 1.3
NME1-210ENST00000512768 BTAF1O14981 1849 aa23.17■■□□□ 1.3
NME1-210ENST00000512768 TWISTNBQ3B726 338 aaPredicted RBP23.17■■□□□ 1.3
NME1-210ENST00000512768 FMNL2Q96PY5 1086 aa23.17■■□□□ 1.3
NME1-210ENST00000512768 KCPQ6ZWJ8 1503 aa23.17■■□□□ 1.3
NME1-210ENST00000512768 BCL11BQ9C0K0 894 aaPredicted RBP23.16■■□□□ 1.3
NME1-210ENST00000512768 PTCD1O75127 700 aaKnown RBP23.15■■□□□ 1.3
NME1-210ENST00000512768 TRIM37O94972 964 aa23.15■■□□□ 1.3
NME1-210ENST00000512768 CT47B1P0C2W7 299 aaPredicted RBP23.15■■□□□ 1.3
NME1-210ENST00000512768 HEG1Q9ULI3 1381 aa23.14■■□□□ 1.3
NME1-210ENST00000512768 VAMP4O75379 141 aa23.14■■□□□ 1.29
NME1-210ENST00000512768 SMARCC1Q92922 1105 aaPredicted RBP23.14■■□□□ 1.29
NME1-210ENST00000512768 RBM42Q9BTD8 480 aaKnown RBP23.13■■□□□ 1.29
NME1-210ENST00000512768 SOS1Q07889 1333 aaPredicted RBP23.12■■□□□ 1.29
NME1-210ENST00000512768 GIGYF1O75420 1035 aaPredicted RBP23.12■■□□□ 1.29
NME1-210ENST00000512768 RCAN3Q9UKA8 241 aa23.12■■□□□ 1.29
NME1-210ENST00000512768 PALLDQ8WX93 1383 aa23.12■■□□□ 1.29
NME1-210ENST00000512768 HOXB7P09629 217 aa23.11■■□□□ 1.29
NME1-210ENST00000512768 SNRPA1P09661 255 aaKnown RBP23.11■■□□□ 1.29
NME1-210ENST00000512768 EP400Q96L91 3159 aa23.1■■□□□ 1.29
NME1-210ENST00000512768 C5P01031 1676 aa23.1■■□□□ 1.29
NME1-210ENST00000512768 PRAMEF22A3QJZ6 481 aa23.1■■□□□ 1.29
NME1-210ENST00000512768 ZNF428Q96B54 188 aa23.08■■□□□ 1.29
NME1-210ENST00000512768 LOC102724428A0A0B4J2F2 783 aa23.07■■□□□ 1.28
NME1-210ENST00000512768 EIF2S2P20042 333 aaKnown RBP23.07■■□□□ 1.28
NME1-210ENST00000512768 RARSP54136 660 aaKnown RBP23.07■■□□□ 1.28
NME1-210ENST00000512768 SIK1P57059 783 aa23.07■■□□□ 1.28
NME1-210ENST00000512768 HDGFL1Q5TGJ6 251 aa23.07■■□□□ 1.28
NME1-210ENST00000512768 VSIG10Q8N0Z9 540 aa23.07■■□□□ 1.28
NME1-210ENST00000512768 NECTIN2Q92692 538 aa23.07■■□□□ 1.28
NME1-210ENST00000512768 SLC4A9Q96Q91 983 aa23.07■■□□□ 1.28
NME1-210ENST00000512768 TCERG1O14776 1098 aaKnown RBP23.06■■□□□ 1.28
NME1-210ENST00000512768 SSH1Q8WYL5 1049 aa23.06■■□□□ 1.28
NME1-210ENST00000512768 LAMB4A4D0S4 1761 aa23.06■■□□□ 1.28
NME1-210ENST00000512768 ALDH1L2Q3SY69 923 aa23.05■■□□□ 1.28
NME1-210ENST00000512768 CCDC30Q5VVM6 783 aa23.05■■□□□ 1.28
NME1-210ENST00000512768 DNAJC10Q8IXB1 793 aa23.05■■□□□ 1.28
NME1-210ENST00000512768 TEX13AQ9BXU3 409 aaPredicted RBP23.05■■□□□ 1.28
NME1-210ENST00000512768 CHMP4AQ9BY43 222 aa23.05■■□□□ 1.28
NME1-210ENST00000512768 BCL2L13Q9BXK5 485 aa23.04■■□□□ 1.28
NME1-210ENST00000512768 SMC4Q9NTJ3 1288 aa23.04■■□□□ 1.28
NME1-210ENST00000512768 USP16Q9Y5T5 823 aa23.04■■□□□ 1.28
NME1-210ENST00000512768 LY75O60449 1722 aa23.04■■□□□ 1.28
NME1-210ENST00000512768 TJP1Q07157 1748 aa23.04■■□□□ 1.28
NME1-210ENST00000512768 TNS1Q9HBL0 1735 aaKnown RBP23.04■■□□□ 1.28
NME1-210ENST00000512768 BCAR3O75815 825 aa23.03■■□□□ 1.28
NME1-210ENST00000512768 APBA3O96018 575 aa23.03■■□□□ 1.28
NME1-210ENST00000512768 ATP6V1AP38606 617 aa23.03■■□□□ 1.28
NME1-210ENST00000512768 STK31Q9BXU1 1019 aa23.02■■□□□ 1.28
NME1-210ENST00000512768 ZNF831Q5JPB2 1677 aa23.02■■□□□ 1.28
NME1-210ENST00000512768 ITPK1Q13572 414 aa23.01■■□□□ 1.27
NME1-210ENST00000512768 STARD3NLO95772 234 aa23■■□□□ 1.27
NME1-210ENST00000512768 MRPL50Q8N5N7 158 aaKnown RBP23■■□□□ 1.27
NME1-210ENST00000512768 CCNL1Q9UK58 526 aaPredicted RBP23■■□□□ 1.27
NME1-210ENST00000512768 CICQ96RK0 1608 aaPredicted RBP23■■□□□ 1.27
NME1-210ENST00000512768 KCNQ4P56696 695 aa22.99■■□□□ 1.27
NME1-210ENST00000512768 CHPF2Q9P2E5 772 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms