RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 LINC00116Q8NCU8 138 aa14.21□□□□□ -0.13
NEDD9-213ENST00000512665 WBP1LQ9NX94 342 aa14.21□□□□□ -0.13
NEDD9-213ENST00000512665 ITGB4P16144 1822 aa14.2□□□□□ -0.14
NEDD9-213ENST00000512665 GNPATO15228 680 aa14.2□□□□□ -0.14
NEDD9-213ENST00000512665 EDC4Q6P2E9 1401 aaKnown RBP14.19□□□□□ -0.14
NEDD9-213ENST00000512665 LOC102724428A0A0B4J2F2 783 aa14.19□□□□□ -0.14
NEDD9-213ENST00000512665 LBX1P52954 281 aa14.19□□□□□ -0.14
NEDD9-213ENST00000512665 SIK1P57059 783 aa14.19□□□□□ -0.14
NEDD9-213ENST00000512665 TMF1P82094 1093 aa14.19□□□□□ -0.14
NEDD9-213ENST00000512665 MPRIPQ6WCQ1 1025 aa14.19□□□□□ -0.14
NEDD9-213ENST00000512665 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.19□□□□□ -0.14
NEDD9-213ENST00000512665 VIRMAQ69YN4 1812 aaKnown RBP14.19□□□□□ -0.14
NEDD9-213ENST00000512665 RGPD2P0DJD1 1756 aa14.19□□□□□ -0.14
NEDD9-213ENST00000512665 TIAM2Q8IVF5 1701 aa14.18□□□□□ -0.14
NEDD9-213ENST00000512665 ADRA2BP18089 450 aa14.18□□□□□ -0.14
NEDD9-213ENST00000512665 HSPA8P11142 646 aaKnown RBP14.17□□□□□ -0.14
NEDD9-213ENST00000512665 LMNB1P20700 586 aa14.17□□□□□ -0.14
NEDD9-213ENST00000512665 LTV1Q96GA3 475 aaPredicted RBP14.17□□□□□ -0.14
NEDD9-213ENST00000512665 RTL1A6NKG5 1358 aa14.17□□□□□ -0.14
NEDD9-213ENST00000512665 ZNF831Q5JPB2 1677 aa14.17□□□□□ -0.14
NEDD9-213ENST00000512665 MAP3K19Q56UN5 1328 aa14.16□□□□□ -0.14
NEDD9-213ENST00000512665 POTECB2RU33 542 aa14.16□□□□□ -0.14
NEDD9-213ENST00000512665 HOXC9P31274 260 aa14.16□□□□□ -0.14
NEDD9-213ENST00000512665 CHADLQ6NUI6 762 aa14.16□□□□□ -0.14
NEDD9-213ENST00000512665 RAPGEF4Q8WZA2 1011 aa14.16□□□□□ -0.14
NEDD9-213ENST00000512665 PARP3Q9Y6F1 533 aa14.16□□□□□ -0.14
NEDD9-213ENST00000512665 PIGBQ92521 554 aa14.15□□□□□ -0.14
NEDD9-213ENST00000512665 PDE4DIPQ5VU43 2346 aa14.15□□□□□ -0.14
NEDD9-213ENST00000512665 CCDC85CA6NKD9 419 aa14.14□□□□□ -0.15
NEDD9-213ENST00000512665 GYS1P13807 737 aa14.14□□□□□ -0.15
NEDD9-213ENST00000512665 VEGFBP49765 207 aa14.14□□□□□ -0.15
NEDD9-213ENST00000512665 ITPK1Q13572 414 aa14.14□□□□□ -0.15
NEDD9-213ENST00000512665 TRAPPC3LQ5T215 181 aa14.14□□□□□ -0.15
NEDD9-213ENST00000512665 RTCBQ9Y3I0 505 aaKnown RBP14.14□□□□□ -0.15
NEDD9-213ENST00000512665 SMG6Q86US8 1419 aaKnown RBP14.14□□□□□ -0.15
NEDD9-213ENST00000512665 PASKQ96RG2 1323 aa14.14□□□□□ -0.15
NEDD9-213ENST00000512665 CYP27B1O15528 508 aa14.13□□□□□ -0.15
NEDD9-213ENST00000512665 NKX1-1Q15270 411 aaPredicted RBP14.13□□□□□ -0.15
NEDD9-213ENST00000512665 KDRP35968 1356 aa14.12□□□□□ -0.15
NEDD9-213ENST00000512665 RAB3GAP2Q9H2M9 1393 aa14.12□□□□□ -0.15
NEDD9-213ENST00000512665 TATP17735 454 aaPredicted RBP14.12□□□□□ -0.15
NEDD9-213ENST00000512665 NBPF6Q5VWK0 638 aa14.12□□□□□ -0.15
NEDD9-213ENST00000512665 NBPF4Q96M43 638 aa14.12□□□□□ -0.15
NEDD9-213ENST00000512665 THSD7BQ9C0I4 1608 aa14.12□□□□□ -0.15
NEDD9-213ENST00000512665 MAP2K1Q02750 393 aaPredicted RBP14.11□□□□□ -0.15
NEDD9-213ENST00000512665 RASSF7Q02833 373 aa14.11□□□□□ -0.15
NEDD9-213ENST00000512665 COL5A3P25940 1745 aaPredicted RBP14.1□□□□□ -0.15
NEDD9-213ENST00000512665 ATP6V1AP38606 617 aa14.1□□□□□ -0.15
NEDD9-213ENST00000512665 RC3H1Q5TC82 1133 aaKnown RBP14.1□□□□□ -0.15
NEDD9-213ENST00000512665 DPY19L2Q6NUT2 758 aa14.1□□□□□ -0.15
NEDD9-213ENST00000512665 ARHGEF1Q92888 912 aaKnown RBP14.1□□□□□ -0.15
NEDD9-213ENST00000512665 AMPHP49418 695 aa14.09□□□□□ -0.15
NEDD9-213ENST00000512665 HDGFL2Q7Z4V5 671 aaPredicted RBP14.09□□□□□ -0.15
NEDD9-213ENST00000512665 CNTNAP4Q9C0A0 1308 aa14.09□□□□□ -0.15
NEDD9-213ENST00000512665 DLEC1Q9Y238 1755 aa14.09□□□□□ -0.15
NEDD9-213ENST00000512665 RASSF10A6NK89 507 aa14.08□□□□□ -0.16
NEDD9-213ENST00000512665 TMEM88BA6NKF7 163 aa14.08□□□□□ -0.16
NEDD9-213ENST00000512665 RFC4P35249 363 aa14.08□□□□□ -0.16
NEDD9-213ENST00000512665 CHRNA5P30532 468 aa14.07□□□□□ -0.16
NEDD9-213ENST00000512665 A0A1W2PP64 1363 aa14.07□□□□□ -0.16
NEDD9-213ENST00000512665 RPS6KA4O75676 772 aa14.06□□□□□ -0.16
NEDD9-213ENST00000512665 LDHDQ86WU2 507 aa14.06□□□□□ -0.16
NEDD9-213ENST00000512665 TERF2IPQ9NYB0 399 aa14.06□□□□□ -0.16
NEDD9-213ENST00000512665 TMOD3Q9NYL9 352 aa14.06□□□□□ -0.16
NEDD9-213ENST00000512665 ASAP1Q9ULH1 1129 aa14.06□□□□□ -0.16
NEDD9-213ENST00000512665 NCAPD2Q15021 1401 aa14.06□□□□□ -0.16
NEDD9-213ENST00000512665 DDR1Q08345 913 aa14.05□□□□□ -0.16
NEDD9-213ENST00000512665 USHBP1Q8N6Y0 703 aa14.05□□□□□ -0.16
NEDD9-213ENST00000512665 DICER1Q9UPY3 1922 aaKnown RBP14.05□□□□□ -0.16
NEDD9-213ENST00000512665 CCDC88AQ3V6T2 1871 aa14.04□□□□□ -0.16
NEDD9-213ENST00000512665 NFKBIEO00221 500 aa14.04□□□□□ -0.16
NEDD9-213ENST00000512665 POTEIP0CG38 1075 aa14.04□□□□□ -0.16
NEDD9-213ENST00000512665 POTEJP0CG39 1038 aa14.04□□□□□ -0.16
NEDD9-213ENST00000512665 PRPF38BQ5VTL8 546 aaKnown RBP14.04□□□□□ -0.16
NEDD9-213ENST00000512665 ITGBL1O95965 494 aaPredicted RBP14.03□□□□□ -0.16
NEDD9-213ENST00000512665 COG3Q96JB2 828 aa14.03□□□□□ -0.16
NEDD9-213ENST00000512665 ATG3Q9NT62 314 aa14.03□□□□□ -0.16
NEDD9-213ENST00000512665 USP42Q9H9J4 1324 aaKnown RBP14.03□□□□□ -0.16
NEDD9-213ENST00000512665 INSRP06213 1382 aa14.03□□□□□ -0.16
NEDD9-213ENST00000512665 KIF24Q5T7B8 1368 aa14.03□□□□□ -0.16
NEDD9-213ENST00000512665 SCN4AP35499 1836 aa14.02□□□□□ -0.16
NEDD9-213ENST00000512665 NRXN2Q9P2S2 1712 aa14.02□□□□□ -0.16
NEDD9-213ENST00000512665 WDR33Q9C0J8 1336 aaKnown RBP14.02□□□□□ -0.17
NEDD9-213ENST00000512665 IQCA1LA6NCM1 817 aa14.02□□□□□ -0.17
NEDD9-213ENST00000512665 POLRMTO00411 1230 aaKnown RBP14.02□□□□□ -0.17
NEDD9-213ENST00000512665 DEFB115Q30KQ5 88 aa14.02□□□□□ -0.17
NEDD9-213ENST00000512665 ADAMTSL1Q8N6G6 1762 aa14.01□□□□□ -0.17
NEDD9-213ENST00000512665 TTLL6Q8N841 843 aa14.01□□□□□ -0.17
NEDD9-213ENST00000512665 L3MBTL3Q96JM7 780 aaPredicted RBP14.01□□□□□ -0.17
NEDD9-213ENST00000512665 SLC12A5Q9H2X9 1139 aa14.01□□□□□ -0.17
NEDD9-213ENST00000512665 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.01□□□□□ -0.17
NEDD9-213ENST00000512665 LTBP3Q9NS15 1303 aa14□□□□□ -0.17
NEDD9-213ENST00000512665 TM4SF1P30408 202 aa14□□□□□ -0.17
NEDD9-213ENST00000512665 FKBP8Q14318 412 aa14□□□□□ -0.17
NEDD9-213ENST00000512665 PUS7Q96PZ0 661 aaKnown RBP14□□□□□ -0.17
NEDD9-213ENST00000512665 SLC4A9Q96Q91 983 aa14□□□□□ -0.17
NEDD9-213ENST00000512665 SPG7Q9UQ90 795 aa14□□□□□ -0.17
NEDD9-213ENST00000512665 MYH14Q7Z406 1995 aaKnown RBP14□□□□□ -0.17
NEDD9-213ENST00000512665 LTBP1Q14766 1721 aa13.99□□□□□ -0.17
NEDD9-213ENST00000512665 ADAMTS7Q9UKP4 1686 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms