RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 CPSF1Q10570 1443 aaKnown RBP12.47□□□□□ -0.41
MSH3-203ENST00000512531 ARIH1Q9Y4X5 557 aaPredicted RBP12.47□□□□□ -0.41
MSH3-203ENST00000512531 TTC21BQ7Z4L5 1316 aa12.46□□□□□ -0.41
MSH3-203ENST00000512531 PIK3C2AO00443 1686 aa12.46□□□□□ -0.41
MSH3-203ENST00000512531 MARCH10Q8NA82 808 aaPredicted RBP12.46□□□□□ -0.41
MSH3-203ENST00000512531 AXIN2Q9Y2T1 843 aa12.46□□□□□ -0.41
MSH3-203ENST00000512531 NSD2O96028 1365 aa12.45□□□□□ -0.42
MSH3-203ENST00000512531 CAMK2BQ13554 666 aa12.45□□□□□ -0.42
MSH3-203ENST00000512531 TRPC6Q9Y210 931 aa12.45□□□□□ -0.42
MSH3-203ENST00000512531 WNK3Q9BYP7 1800 aa12.45□□□□□ -0.42
MSH3-203ENST00000512531 CGNL1Q0VF96 1302 aa12.44□□□□□ -0.42
MSH3-203ENST00000512531 CASZ1Q86V15 1759 aa12.44□□□□□ -0.42
MSH3-203ENST00000512531 EXOC5O00471 708 aa12.44□□□□□ -0.42
MSH3-203ENST00000512531 PPP2R1AP30153 589 aa12.44□□□□□ -0.42
MSH3-203ENST00000512531 MYOM1P52179 1685 aa12.43□□□□□ -0.42
MSH3-203ENST00000512531 CFAP53Q96M91 514 aa12.43□□□□□ -0.42
MSH3-203ENST00000512531 ANO8Q9HCE9 1232 aaPredicted RBP12.43□□□□□ -0.42
MSH3-203ENST00000512531 USP31Q70CQ4 1352 aa12.43□□□□□ -0.42
MSH3-203ENST00000512531 ZBTB7CA1YPR0 619 aa12.42□□□□□ -0.42
MSH3-203ENST00000512531 PDE4AP27815 886 aa12.42□□□□□ -0.42
MSH3-203ENST00000512531 PHF12Q96QT6 1004 aa12.42□□□□□ -0.42
MSH3-203ENST00000512531 AKAP12Q02952 1782 aa12.42□□□□□ -0.42
MSH3-203ENST00000512531 NFAT5O94916 1531 aa12.42□□□□□ -0.42
MSH3-203ENST00000512531 MLLT3P42568 568 aaPredicted RBP12.41□□□□□ -0.42
MSH3-203ENST00000512531 SLC15A2Q16348 729 aa12.41□□□□□ -0.42
MSH3-203ENST00000512531 TXNRD1Q16881 649 aa12.41□□□□□ -0.42
MSH3-203ENST00000512531 TNS2Q63HR2 1409 aa12.41□□□□□ -0.42
MSH3-203ENST00000512531 STK32BQ9NY57 414 aa12.41□□□□□ -0.42
MSH3-203ENST00000512531 CSB-PGBD3P0DP91 1061 aa12.4□□□□□ -0.42
MSH3-203ENST00000512531 PTGER2P43116 358 aa12.4□□□□□ -0.42
MSH3-203ENST00000512531 PTF1AQ7RTS3 328 aa12.4□□□□□ -0.42
MSH3-203ENST00000512531 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.4□□□□□ -0.42
MSH3-203ENST00000512531 USP54Q70EL1 1684 aa12.39□□□□□ -0.43
MSH3-203ENST00000512531 RBM26Q5T8P6 1007 aaKnown RBP12.39□□□□□ -0.43
MSH3-203ENST00000512531 MORC1Q86VD1 984 aa12.39□□□□□ -0.43
MSH3-203ENST00000512531 PIP4P2Q8N4L2 257 aa12.39□□□□□ -0.43
MSH3-203ENST00000512531 DDX27Q96GQ7 796 aaKnown RBP12.39□□□□□ -0.43
MSH3-203ENST00000512531 MTFR1LQ9H019 292 aa12.39□□□□□ -0.43
MSH3-203ENST00000512531 TERF2IPQ9NYB0 399 aa12.39□□□□□ -0.43
MSH3-203ENST00000512531 RCAN3Q9UKA8 241 aa12.38□□□□□ -0.43
MSH3-203ENST00000512531 ANKRD36BQ8N2N9 1353 aa12.38□□□□□ -0.43
MSH3-203ENST00000512531 MAP3K5Q99683 1374 aa12.38□□□□□ -0.43
MSH3-203ENST00000512531 ERBB3P21860 1342 aa12.37□□□□□ -0.43
MSH3-203ENST00000512531 RNF123Q5XPI4 1314 aa12.37□□□□□ -0.43
MSH3-203ENST00000512531 NHSQ6T4R5 1651 aa12.37□□□□□ -0.43
MSH3-203ENST00000512531 RGPD5Q99666 1765 aa12.37□□□□□ -0.43
MSH3-203ENST00000512531 MON2Q7Z3U7 1717 aa12.37□□□□□ -0.43
MSH3-203ENST00000512531 NSD3Q9BZ95 1437 aa12.37□□□□□ -0.43
MSH3-203ENST00000512531 ZBTB7AO95365 584 aa12.36□□□□□ -0.43
MSH3-203ENST00000512531 IL2RBP14784 551 aa12.36□□□□□ -0.43
MSH3-203ENST00000512531 HDGFL2Q7Z4V5 671 aaPredicted RBP12.36□□□□□ -0.43
MSH3-203ENST00000512531 CCDC136Q96JN2 1154 aa12.36□□□□□ -0.43
MSH3-203ENST00000512531 PDGFDQ9GZP0 370 aaPredicted RBP12.36□□□□□ -0.43
MSH3-203ENST00000512531 PNNQ9H307 717 aaKnown RBP12.36□□□□□ -0.43
MSH3-203ENST00000512531 SYT17Q9BSW7 474 aa12.35□□□□□ -0.43
MSH3-203ENST00000512531 GPBP1L1Q9HC44 474 aaPredicted RBP12.35□□□□□ -0.43
MSH3-203ENST00000512531 RRP1P56182 461 aaKnown RBP12.34□□□□□ -0.43
MSH3-203ENST00000512531 GOLGA2Q08379 1002 aa12.34□□□□□ -0.43
MSH3-203ENST00000512531 SLC16A10Q8TF71 515 aa12.34□□□□□ -0.43
MSH3-203ENST00000512531 ADAMTS8Q9UP79 889 aa12.34□□□□□ -0.43
MSH3-203ENST00000512531 CD163L1Q9NR16 1453 aa12.34□□□□□ -0.43
MSH3-203ENST00000512531 PAPPAQ13219 1627 aa12.33□□□□□ -0.43
MSH3-203ENST00000512531 IRX6P78412 446 aaPredicted RBP12.33□□□□□ -0.44
MSH3-203ENST00000512531 SLC27A3Q5K4L6 730 aa12.33□□□□□ -0.44
MSH3-203ENST00000512531 FHDC1Q9C0D6 1143 aaPredicted RBP12.33□□□□□ -0.44
MSH3-203ENST00000512531 NLRP2Q9NX02 1062 aa12.33□□□□□ -0.44
MSH3-203ENST00000512531 EDC4Q6P2E9 1401 aaKnown RBP12.33□□□□□ -0.44
MSH3-203ENST00000512531 TMEM106CQ9BVX2 250 aa12.32□□□□□ -0.44
MSH3-203ENST00000512531 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.31□□□□□ -0.44
MSH3-203ENST00000512531 ZNF784Q8NCA9 323 aaPredicted RBP12.31□□□□□ -0.44
MSH3-203ENST00000512531 ANKRD24Q8TF21 1146 aa12.31□□□□□ -0.44
MSH3-203ENST00000512531 SALL2Q9Y467 1007 aaPredicted RBP12.31□□□□□ -0.44
MSH3-203ENST00000512531 CHD4Q14839 1912 aa12.31□□□□□ -0.44
MSH3-203ENST00000512531 E9PSI1 815 aa12.3□□□□□ -0.44
MSH3-203ENST00000512531 NEFMP07197 916 aa12.3□□□□□ -0.44
MSH3-203ENST00000512531 SMYD5Q6GMV2 418 aa12.3□□□□□ -0.44
MSH3-203ENST00000512531 NME9Q86XW9 330 aa12.3□□□□□ -0.44
MSH3-203ENST00000512531 IP6K1Q92551 441 aa12.3□□□□□ -0.44
MSH3-203ENST00000512531 SLC12A5Q9H2X9 1139 aa12.3□□□□□ -0.44
MSH3-203ENST00000512531 EMILIN3Q9NT22 766 aa12.3□□□□□ -0.44
MSH3-203ENST00000512531 FAM208AQ9UK61 1670 aaKnown RBP12.29□□□□□ -0.44
MSH3-203ENST00000512531 QSER1Q2KHR3 1735 aa12.29□□□□□ -0.44
MSH3-203ENST00000512531 LTN1O94822 1766 aa12.29□□□□□ -0.44
MSH3-203ENST00000512531 HMGB2P26583 209 aaKnown RBP12.29□□□□□ -0.44
MSH3-203ENST00000512531 ACSBG1Q96GR2 724 aa12.29□□□□□ -0.44
MSH3-203ENST00000512531 CARD14Q9BXL6 1004 aa12.29□□□□□ -0.44
MSH3-203ENST00000512531 BTAF1O14981 1849 aa12.29□□□□□ -0.44
MSH3-203ENST00000512531 CD44P16070 742 aaKnown RBP12.28□□□□□ -0.44
MSH3-203ENST00000512531 RUNDC1Q96C34 613 aa12.28□□□□□ -0.44
MSH3-203ENST00000512531 MS4A3Q96HJ5 214 aa12.28□□□□□ -0.44
MSH3-203ENST00000512531 LRRC4BQ9NT99 713 aa12.28□□□□□ -0.44
MSH3-203ENST00000512531 COL24A1Q17RW2 1714 aa12.28□□□□□ -0.44
MSH3-203ENST00000512531 ZNF827Q17R98 1081 aa12.27□□□□□ -0.45
MSH3-203ENST00000512531 CHRDL2Q6WN34 429 aa12.27□□□□□ -0.45
MSH3-203ENST00000512531 KAT6BQ8WYB5 2073 aa12.26□□□□□ -0.45
MSH3-203ENST00000512531 POLD1P28340 1107 aa12.26□□□□□ -0.45
MSH3-203ENST00000512531 PPP1R15BQ5SWA1 713 aa12.26□□□□□ -0.45
MSH3-203ENST00000512531 B4GALNT3Q6L9W6 998 aa12.26□□□□□ -0.45
MSH3-203ENST00000512531 HOMEZQ8IX15 550 aa12.26□□□□□ -0.45
MSH3-203ENST00000512531 AK7Q96M32 723 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms