RNA–Protein interactions for RNA: ENST00000512064.5

GYPA-208, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 441 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-208ENST00000512064 NXF1Q9UBU9 619 aaKnown RBP5.16□□□□□ -1.58
GYPA-208ENST00000512064 ISY1Q9ULR0 285 aaKnown RBP5.16□□□□□ -1.58
GYPA-208ENST00000512064 FAM196BA6NMK8 535 aa5.15□□□□□ -1.59
GYPA-208ENST00000512064 RFX1P22670 979 aa5.15□□□□□ -1.59
GYPA-208ENST00000512064 OS9Q13438 667 aaPredicted RBP5.15□□□□□ -1.59
GYPA-208ENST00000512064 LINC01559Q495D7 138 aa5.15□□□□□ -1.59
GYPA-208ENST00000512064 KANK4Q5T7N3 995 aaPredicted RBP5.15□□□□□ -1.59
GYPA-208ENST00000512064 RC3H1Q5TC82 1133 aaKnown RBP5.15□□□□□ -1.59
GYPA-208ENST00000512064 CTR9Q6PD62 1173 aa5.15□□□□□ -1.59
GYPA-208ENST00000512064 TBC1D9Q6ZT07 1266 aa5.15□□□□□ -1.59
GYPA-208ENST00000512064 BAP1Q92560 729 aa5.15□□□□□ -1.59
GYPA-208ENST00000512064 HIRIP3Q9BW71 556 aaPredicted RBP5.15□□□□□ -1.59
GYPA-208ENST00000512064 CHIC2Q9UKJ5 165 aa5.15□□□□□ -1.59
GYPA-208ENST00000512064 USP17L3A6NCW0 530 aa5.14□□□□□ -1.59
GYPA-208ENST00000512064 USP17L4A6NCW7 530 aa5.14□□□□□ -1.59
GYPA-208ENST00000512064 MFAP1P55081 439 aaKnown RBP5.14□□□□□ -1.59
GYPA-208ENST00000512064 WNT7BP56706 349 aa5.14□□□□□ -1.59
GYPA-208ENST00000512064 PTK2Q05397 1052 aa5.14□□□□□ -1.59
GYPA-208ENST00000512064 USP17L2Q6R6M4 530 aa5.14□□□□□ -1.59
GYPA-208ENST00000512064 USP17L1Q7RTZ2 530 aa5.14□□□□□ -1.59
GYPA-208ENST00000512064 EHBP1Q8NDI1 1231 aa5.14□□□□□ -1.59
GYPA-208ENST00000512064 SNIP1Q8TAD8 396 aaKnown RBP5.14□□□□□ -1.59
GYPA-208ENST00000512064 GZF1Q9H116 711 aaPredicted RBP5.14□□□□□ -1.59
GYPA-208ENST00000512064 VRTNQ9H8Y1 702 aa5.14□□□□□ -1.59
GYPA-208ENST00000512064 PLEKHD1A6NEE1 506 aa5.13□□□□□ -1.59
GYPA-208ENST00000512064 USP17L5A8MUK1 530 aa5.13□□□□□ -1.59
GYPA-208ENST00000512064 NEFHP12036 1026 aa5.13□□□□□ -1.59
GYPA-208ENST00000512064 SH3BP2P78314 561 aa5.13□□□□□ -1.59
GYPA-208ENST00000512064 MAP7D1Q3KQU3 841 aa5.13□□□□□ -1.59
GYPA-208ENST00000512064 CERS3Q8IU89 383 aa5.13□□□□□ -1.59
GYPA-208ENST00000512064 PAIP2Q9BPZ3 127 aaKnown RBP5.13□□□□□ -1.59
GYPA-208ENST00000512064 TERF2IPQ9NYB0 399 aa5.13□□□□□ -1.59
GYPA-208ENST00000512064 RAI14Q9P0K7 980 aa5.13□□□□□ -1.59
GYPA-208ENST00000512064 MAP10Q9P2G4 905 aa5.13□□□□□ -1.59
GYPA-208ENST00000512064 ATP5J2-PTCD1G3V325 749 aa5.12□□□□□ -1.59
GYPA-208ENST00000512064 HDAC1Q13547 482 aaPredicted RBP5.12□□□□□ -1.59
GYPA-208ENST00000512064 NBPF9Q3BBW0 867 aa5.12□□□□□ -1.59
GYPA-208ENST00000512064 SND1Q7KZF4 910 aaKnown RBP eCLIP5.12□□□□□ -1.593e-7■■■■□ 23.9
GYPA-208ENST00000512064 CCDC125Q86Z20 511 aa5.12□□□□□ -1.59
GYPA-208ENST00000512064 FEZ2Q9UHY8 353 aaPredicted RBP5.12□□□□□ -1.59
GYPA-208ENST00000512064 AMOTL2Q9Y2J4 779 aa5.12□□□□□ -1.59
GYPA-208ENST00000512064 CCDC66A2RUB6 948 aa5.11□□□□□ -1.59
GYPA-208ENST00000512064 J3QL48 77 aa5.11□□□□□ -1.59
GYPA-208ENST00000512064 GOLIM4O00461 696 aa5.11□□□□□ -1.59
GYPA-208ENST00000512064 ALDH1A1P00352 501 aa5.11□□□□□ -1.59
GYPA-208ENST00000512064 EXOC8Q8IYI6 725 aa5.11□□□□□ -1.59
GYPA-208ENST00000512064 PHTF2Q8N3S3 785 aa5.11□□□□□ -1.59
GYPA-208ENST00000512064 TMEM151AQ8N4L1 468 aa5.11□□□□□ -1.59
GYPA-208ENST00000512064 ZNF511Q8NB15 262 aa5.11□□□□□ -1.59
GYPA-208ENST00000512064 MNS1Q8NEH6 495 aa5.11□□□□□ -1.59
GYPA-208ENST00000512064 EFCC1Q9HA90 598 aa5.11□□□□□ -1.59
GYPA-208ENST00000512064 CEP126Q9P2H0 1117 aa5.11□□□□□ -1.59
GYPA-208ENST00000512064 ZMIZ1Q9ULJ6 1067 aa5.11□□□□□ -1.59
GYPA-208ENST00000512064 PIK3CDO00329 1044 aa5.1□□□□□ -1.59
GYPA-208ENST00000512064 SKIP12755 728 aa5.1□□□□□ -1.59
GYPA-208ENST00000512064 SMPD1P17405 629 aa5.1□□□□□ -1.59
GYPA-208ENST00000512064 ERCC3P19447 782 aa5.1□□□□□ -1.59
GYPA-208ENST00000512064 DMTNQ08495 405 aa5.1□□□□□ -1.59
GYPA-208ENST00000512064 AGERQ15109 404 aa5.1□□□□□ -1.59
GYPA-208ENST00000512064 ZKSCAN8Q15776 578 aaPredicted RBP5.1□□□□□ -1.59
GYPA-208ENST00000512064 SWI5Q1ZZU3 235 aa5.1□□□□□ -1.59
GYPA-208ENST00000512064 SLFNL1Q499Z3 407 aa5.1□□□□□ -1.59
GYPA-208ENST00000512064 SH3BP5LQ7L8J4 393 aa5.1□□□□□ -1.59
GYPA-208ENST00000512064 CREBRFQ8IUR6 639 aa5.1□□□□□ -1.59
GYPA-208ENST00000512064 OCSTAMPQ9BR26 566 aa5.1□□□□□ -1.59
GYPA-208ENST00000512064 PRDM10Q9NQV6 1147 aa5.1□□□□□ -1.59
GYPA-208ENST00000512064 PPP4R2Q9NY27 417 aa5.1□□□□□ -1.59
GYPA-208ENST00000512064 BRPF3Q9ULD4 1205 aa5.1□□□□□ -1.59
GYPA-208ENST00000512064 MYO15BQ96JP2 1530 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 USP17L15C9J2P7 530 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 USP17L10C9JJH3 530 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 USP17L13C9JLJ4 530 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 USP17L12C9JPN9 530 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 USP17L11C9JVI0 530 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 USP17L21D6R901 530 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 USP17L18D6R9N7 530 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 USP17L22D6RA61 530 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 USP17L17D6RBQ6 530 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 USP17L19D6RCP7 530 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 USP17L20D6RJB6 530 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 USP17L24Q0WX57 530 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 PTK7Q13308 1070 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 CCDC27Q2M243 656 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 XP32Q5T750 250 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 TMEM164Q5U3C3 297 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 TRIM50Q86XT4 487 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 OTUD6BQ8N6M0 293 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 FAM174AQ8TBP5 190 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 HPS1Q92902 700 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 FOXJ1Q92949 421 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 CLP1Q92989 425 aaKnown RBP5.09□□□□□ -1.59
GYPA-208ENST00000512064 NOVA2Q9UNW9 492 aaKnown RBP5.09□□□□□ -1.59
GYPA-208ENST00000512064 KNSTRNQ9Y448 316 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 WASF2Q9Y6W5 498 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 IVNS1ABPQ9Y6Y0 642 aa5.09□□□□□ -1.59
GYPA-208ENST00000512064 RNF225M0QZC1 329 aaPredicted RBP5.08□□□□□ -1.6
GYPA-208ENST00000512064 SIAH2O43255 324 aa5.08□□□□□ -1.6
GYPA-208ENST00000512064 VARSP26640 1264 aaKnown RBP5.08□□□□□ -1.6
GYPA-208ENST00000512064 RGS3P49796 1198 aa5.08□□□□□ -1.6
GYPA-208ENST00000512064 ATP1A2P50993 1020 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms