RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 POLD1P28340 1107 aa25.94■■□□□ 1.74
SMAD1-211ENST00000512019 PRKAR2BP31323 418 aa25.94■■□□□ 1.74
SMAD1-211ENST00000512019 ADAMTS8Q9UP79 889 aa25.94■■□□□ 1.74
SMAD1-211ENST00000512019 NEFMP07197 916 aa25.93■■□□□ 1.74
SMAD1-211ENST00000512019 COL23A1Q86Y22 540 aaPredicted RBP25.93■■□□□ 1.74
SMAD1-211ENST00000512019 MPRIPQ6WCQ1 1025 aa25.92■■□□□ 1.74
SMAD1-211ENST00000512019 ZNF784Q8NCA9 323 aaPredicted RBP25.92■■□□□ 1.74
SMAD1-211ENST00000512019 MSH5O43196 834 aa25.91■■□□□ 1.74
SMAD1-211ENST00000512019 PALLDQ8WX93 1383 aa25.91■■□□□ 1.74
SMAD1-211ENST00000512019 AMOTQ4VCS5 1084 aa25.9■■□□□ 1.74
SMAD1-211ENST00000512019 FAM9BQ8IZU0 186 aa25.9■■□□□ 1.74
SMAD1-211ENST00000512019 NLGN2Q8NFZ4 835 aa25.9■■□□□ 1.74
SMAD1-211ENST00000512019 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.9■■□□□ 1.74
SMAD1-211ENST00000512019 C4BP0C0L5 1744 aa25.9■■□□□ 1.74
SMAD1-211ENST00000512019 MAPK8IP3Q9UPT6 1336 aa25.89■■□□□ 1.74
SMAD1-211ENST00000512019 GPR162Q16538 588 aa25.89■■□□□ 1.74
SMAD1-211ENST00000512019 PLEKHO1Q53GL0 409 aaPredicted RBP25.89■■□□□ 1.74
SMAD1-211ENST00000512019 SPG7Q9UQ90 795 aa25.89■■□□□ 1.74
SMAD1-211ENST00000512019 UBR3Q6ZT12 1888 aa25.88■■□□□ 1.73
SMAD1-211ENST00000512019 MSL1Q68DK7 614 aa25.87■■□□□ 1.73
SMAD1-211ENST00000512019 PLEKHF1Q96S99 279 aa25.87■■□□□ 1.73
SMAD1-211ENST00000512019 PELP1Q8IZL8 1130 aaKnown RBP25.86■■□□□ 1.73
SMAD1-211ENST00000512019 RUNDC1Q96C34 613 aa25.86■■□□□ 1.73
SMAD1-211ENST00000512019 CCDC146Q8IYE0 955 aa25.84■■□□□ 1.73
SMAD1-211ENST00000512019 GAS2L2Q8NHY3 880 aa25.84■■□□□ 1.73
SMAD1-211ENST00000512019 PIGBQ92521 554 aa25.84■■□□□ 1.73
SMAD1-211ENST00000512019 NKX1-1Q15270 411 aaPredicted RBP25.83■■□□□ 1.73
SMAD1-211ENST00000512019 PHACTR3Q96KR7 559 aa25.83■■□□□ 1.73
SMAD1-211ENST00000512019 ZNF530Q6P9A1 599 aaPredicted RBP25.82■■□□□ 1.72
SMAD1-211ENST00000512019 AMIGO3Q86WK7 504 aa25.82■■□□□ 1.72
SMAD1-211ENST00000512019 MTHFSDQ2M296 383 aaKnown RBP25.81■■□□□ 1.72
SMAD1-211ENST00000512019 SMIM5Q71RC9 77 aa25.81■■□□□ 1.72
SMAD1-211ENST00000512019 C1orf141Q5JVX7 400 aa25.8■■□□□ 1.72
SMAD1-211ENST00000512019 SMARCC1Q92922 1105 aaPredicted RBP25.8■■□□□ 1.72
SMAD1-211ENST00000512019 IFNL2Q8IZJ0 200 aa25.79■■□□□ 1.72
SMAD1-211ENST00000512019 PHKG2P15735 406 aa25.77■■□□□ 1.72
SMAD1-211ENST00000512019 YBX3P16989 372 aaKnown RBP eCLIP25.77■■□□□ 1.72
SMAD1-211ENST00000512019 NFE2L2Q16236 605 aa25.77■■□□□ 1.72
SMAD1-211ENST00000512019 GOLGB1Q14789 3259 aaKnown RBP25.77■■□□□ 1.72
SMAD1-211ENST00000512019 HSP90AB1P08238 724 aaKnown RBP25.76■■□□□ 1.71
SMAD1-211ENST00000512019 AKAP4Q5JQC9 854 aa25.76■■□□□ 1.71
SMAD1-211ENST00000512019 AK7Q96M32 723 aa25.76■■□□□ 1.71
SMAD1-211ENST00000512019 LINC00116Q8NCU8 138 aa25.75■■□□□ 1.71
SMAD1-211ENST00000512019 FLAD1Q8NFF5 587 aa25.75■■□□□ 1.71
SMAD1-211ENST00000512019 PHF14O94880 888 aa25.74■■□□□ 1.71
SMAD1-211ENST00000512019 TMOD3Q9NYL9 352 aa25.74■■□□□ 1.71
SMAD1-211ENST00000512019 ASAP1Q9ULH1 1129 aa25.74■■□□□ 1.71
SMAD1-211ENST00000512019 LOC102724428A0A0B4J2F2 783 aa25.73■■□□□ 1.71
SMAD1-211ENST00000512019 APAF1O14727 1248 aa25.73■■□□□ 1.71
SMAD1-211ENST00000512019 TMPOP42166 694 aaKnown RBP25.73■■□□□ 1.71
SMAD1-211ENST00000512019 SIK1P57059 783 aa25.73■■□□□ 1.71
SMAD1-211ENST00000512019 GNAT3A8MTJ3 354 aa25.72■■□□□ 1.71
SMAD1-211ENST00000512019 ITPK1Q13572 414 aa25.72■■□□□ 1.71
SMAD1-211ENST00000512019 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.71■■□□□ 1.71
SMAD1-211ENST00000512019 LMOD3Q0VAK6 560 aa25.71■■□□□ 1.71
SMAD1-211ENST00000512019 HTATSF1O43719 755 aaKnown RBP25.7■■□□□ 1.7
SMAD1-211ENST00000512019 HMGB2P26583 209 aaKnown RBP25.7■■□□□ 1.7
SMAD1-211ENST00000512019 RIPK4P57078 832 aa25.7■■□□□ 1.7
SMAD1-211ENST00000512019 RTF1Q92541 710 aaKnown RBP25.7■■□□□ 1.7
SMAD1-211ENST00000512019 DCAF5Q96JK2 942 aa25.7■■□□□ 1.7
SMAD1-211ENST00000512019 DLG5Q8TDM6 1919 aa25.7■■□□□ 1.7
SMAD1-211ENST00000512019 ATG3Q9NT62 314 aa25.69■■□□□ 1.7
SMAD1-211ENST00000512019 RRP7AQ9Y3A4 280 aaKnown RBP25.69■■□□□ 1.7
SMAD1-211ENST00000512019 NEUROD2Q15784 382 aa25.68■■□□□ 1.7
SMAD1-211ENST00000512019 CD2APQ9Y5K6 639 aa25.68■■□□□ 1.7
SMAD1-211ENST00000512019 ADAMTS7Q9UKP4 1686 aa25.68■■□□□ 1.7
SMAD1-211ENST00000512019 KDM6AO15550 1401 aaPredicted RBP25.67■■□□□ 1.7
SMAD1-211ENST00000512019 COL5A3P25940 1745 aaPredicted RBP25.67■■□□□ 1.7
SMAD1-211ENST00000512019 ATP6V1AP38606 617 aa25.67■■□□□ 1.7
SMAD1-211ENST00000512019 NGEFQ8N5V2 710 aa25.67■■□□□ 1.7
SMAD1-211ENST00000512019 SSFA2P28290 1259 aa25.66■■□□□ 1.7
SMAD1-211ENST00000512019 NCBP3Q53F19 620 aaKnown RBP25.66■■□□□ 1.7
SMAD1-211ENST00000512019 SCN11AQ9UI33 1791 aa25.66■■□□□ 1.7
SMAD1-211ENST00000512019 ZNF831Q5JPB2 1677 aa25.65■■□□□ 1.7
SMAD1-211ENST00000512019 GNPATO15228 680 aa25.65■■□□□ 1.7
SMAD1-211ENST00000512019 GRIN3BO60391 1043 aa25.65■■□□□ 1.7
SMAD1-211ENST00000512019 C1QTNF8P60827 252 aa25.65■■□□□ 1.7
SMAD1-211ENST00000512019 RNMTO43148 476 aaKnown RBP25.64■■□□□ 1.7
SMAD1-211ENST00000512019 SLC4A9Q96Q91 983 aa25.63■■□□□ 1.69
SMAD1-211ENST00000512019 VIRMAQ69YN4 1812 aaKnown RBP25.63■■□□□ 1.69
SMAD1-211ENST00000512019 MRC1P22897 1456 aa25.62■■□□□ 1.69
SMAD1-211ENST00000512019 CEMIPQ8WUJ3 1361 aa25.62■■□□□ 1.69
SMAD1-211ENST00000512019 ERVV-2B6SEH9 535 aa25.62■■□□□ 1.69
SMAD1-211ENST00000512019 CCDC27Q2M243 656 aa25.62■■□□□ 1.69
SMAD1-211ENST00000512019 WWC3Q9ULE0 1092 aa25.62■■□□□ 1.69
SMAD1-211ENST00000512019 MCM10Q7L590 875 aa25.61■■□□□ 1.69
SMAD1-211ENST00000512019 TRIM35Q9UPQ4 493 aa25.61■■□□□ 1.69
SMAD1-211ENST00000512019 MYH14Q7Z406 1995 aaKnown RBP25.61■■□□□ 1.69
SMAD1-211ENST00000512019 SENP3-EIF4A1A0A087X0R7 540 aa25.6■■□□□ 1.69
SMAD1-211ENST00000512019 IL17REQ8NFR9 667 aa25.6■■□□□ 1.69
SMAD1-211ENST00000512019 LGR6Q9HBX8 967 aa25.6■■□□□ 1.69
SMAD1-211ENST00000512019 KIF13BQ9NQT8 1826 aa25.6■■□□□ 1.69
SMAD1-211ENST00000512019 KIAA1551Q9HCM1 1747 aa25.6■■□□□ 1.69
SMAD1-211ENST00000512019 GIGYF1O75420 1035 aaPredicted RBP25.59■■□□□ 1.69
SMAD1-211ENST00000512019 TEFQ10587 303 aa25.59■■□□□ 1.69
SMAD1-211ENST00000512019 DCTN1Q14203 1278 aa25.59■■□□□ 1.69
SMAD1-211ENST00000512019 RBM42Q9BTD8 480 aaKnown RBP25.59■■□□□ 1.69
SMAD1-211ENST00000512019 C4AP0C0L4 1744 aa25.59■■□□□ 1.69
SMAD1-211ENST00000512019 N4BP2Q86UW6 1770 aaPredicted RBP25.59■■□□□ 1.69
SMAD1-211ENST00000512019 CABP4P57796 275 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms