RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 SIRT1Q96EB6 747 aa9.84□□□□□ -0.83
COPS4-209ENST00000511653 PRAM1Q96QH2 718 aa9.84□□□□□ -0.83
COPS4-209ENST00000511653 GOPCQ9HD26 462 aa9.84□□□□□ -0.83
COPS4-209ENST00000511653 ERBB3P21860 1342 aa9.84□□□□□ -0.83
COPS4-209ENST00000511653 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.83□□□□□ -0.84
COPS4-209ENST00000511653 DEFB132Q7Z7B7 95 aa9.83□□□□□ -0.84
COPS4-209ENST00000511653 ARHGEF28Q8N1W1 1705 aaKnown RBP9.83□□□□□ -0.84
COPS4-209ENST00000511653 POLR3EQ9NVU0 708 aa9.83□□□□□ -0.84
COPS4-209ENST00000511653 SBNO1A3KN83 1393 aa9.83□□□□□ -0.84
COPS4-209ENST00000511653 DHX57Q6P158 1386 aaKnown RBP9.83□□□□□ -0.84
COPS4-209ENST00000511653 ANKARQ7Z5J8 1434 aa9.83□□□□□ -0.84
COPS4-209ENST00000511653 CCDC125Q86Z20 511 aa9.83□□□□□ -0.84
COPS4-209ENST00000511653 PMFBP1Q8TBY8 1022 aa9.83□□□□□ -0.84
COPS4-209ENST00000511653 KIAA1468Q9P260 1216 aa9.83□□□□□ -0.84
COPS4-209ENST00000511653 COL14A1Q05707 1796 aaKnown RBP9.83□□□□□ -0.84
COPS4-209ENST00000511653 VPS72Q15906 364 aa9.82□□□□□ -0.84
COPS4-209ENST00000511653 MYSM1Q5VVJ2 828 aa9.82□□□□□ -0.84
COPS4-209ENST00000511653 SEPT12Q8IYM1 358 aa9.82□□□□□ -0.84
COPS4-209ENST00000511653 ARHGEF10O15013 1369 aa9.82□□□□□ -0.84
COPS4-209ENST00000511653 ITSN1Q15811 1721 aa9.82□□□□□ -0.84
COPS4-209ENST00000511653 TULP4Q9NRJ4 1543 aa9.81□□□□□ -0.84
COPS4-209ENST00000511653 TNS1Q9HBL0 1735 aaKnown RBP9.81□□□□□ -0.84
COPS4-209ENST00000511653 HIRIP3Q9BW71 556 aaPredicted RBP9.81□□□□□ -0.84
COPS4-209ENST00000511653 RAB3GAP2Q9H2M9 1393 aa9.81□□□□□ -0.84
COPS4-209ENST00000511653 PRR36Q9H6K5 1346 aa9.81□□□□□ -0.84
COPS4-209ENST00000511653 LRP5O75197 1615 aa9.81□□□□□ -0.84
COPS4-209ENST00000511653 PHRF1Q9P1Y6 1649 aaKnown RBP9.81□□□□□ -0.84
COPS4-209ENST00000511653 RGPD1P0DJD0 1748 aa9.81□□□□□ -0.84
COPS4-209ENST00000511653 NBPF26B4DH59 902 aa9.8□□□□□ -0.84
COPS4-209ENST00000511653 ONECUT3O60422 494 aaPredicted RBP9.8□□□□□ -0.84
COPS4-209ENST00000511653 PSME1Q06323 249 aa9.8□□□□□ -0.84
COPS4-209ENST00000511653 PACS2Q86VP3 889 aa9.8□□□□□ -0.84
COPS4-209ENST00000511653 TMEM134Q9H6X4 195 aa9.8□□□□□ -0.84
COPS4-209ENST00000511653 THSD7AQ9UPZ6 1657 aa9.8□□□□□ -0.84
COPS4-209ENST00000511653 FAM83GA6ND36 823 aa9.8□□□□□ -0.84
COPS4-209ENST00000511653 CD46P15529 392 aa9.8□□□□□ -0.84
COPS4-209ENST00000511653 SKIV2LQ15477 1246 aaKnown RBP9.8□□□□□ -0.84
COPS4-209ENST00000511653 ERICH6Q7L0X2 663 aa9.8□□□□□ -0.84
COPS4-209ENST00000511653 PCMTD1Q96MG8 357 aaPredicted RBP9.8□□□□□ -0.84
COPS4-209ENST00000511653 TBC1D2Q9BYX2 928 aa9.8□□□□□ -0.84
COPS4-209ENST00000511653 POGKQ9P215 609 aa9.8□□□□□ -0.84
COPS4-209ENST00000511653 CCDC9Q9Y3X0 531 aaKnown RBP9.8□□□□□ -0.84
COPS4-209ENST00000511653 FAM205CA6NFA0 338 aa9.79□□□□□ -0.84
COPS4-209ENST00000511653 DDX11L8A8MPP1 907 aa9.79□□□□□ -0.84
COPS4-209ENST00000511653 DNAJB2P25686 324 aa9.79□□□□□ -0.84
COPS4-209ENST00000511653 LCE2DQ5TA82 110 aaPredicted RBP9.79□□□□□ -0.84
COPS4-209ENST00000511653 SEPT9Q9UHD8 586 aaPredicted RBP9.79□□□□□ -0.84
COPS4-209ENST00000511653 TRAK1Q9UPV9 953 aa9.79□□□□□ -0.84
COPS4-209ENST00000511653 TOPAZ1Q8N9V7 1692 aa9.79□□□□□ -0.84
COPS4-209ENST00000511653 ATP7BP35670 1465 aa9.78□□□□□ -0.84
COPS4-209ENST00000511653 ARHGAP33O14559 1287 aa9.78□□□□□ -0.84
COPS4-209ENST00000511653 EMP3P54852 163 aa9.78□□□□□ -0.84
COPS4-209ENST00000511653 KRT27Q7Z3Y8 459 aa9.78□□□□□ -0.84
COPS4-209ENST00000511653 SPIRE2Q8WWL2 714 aa9.78□□□□□ -0.84
COPS4-209ENST00000511653 LIMD1Q9UGP4 676 aa9.78□□□□□ -0.84
COPS4-209ENST00000511653 ACIN1Q9UKV3 1341 aaKnown RBP9.78□□□□□ -0.84
COPS4-209ENST00000511653 FAM98CQ17RN3 349 aaKnown RBP9.77□□□□□ -0.84
COPS4-209ENST00000511653 BTG4Q9NY30 223 aa9.77□□□□□ -0.84
COPS4-209ENST00000511653 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.77□□□□□ -0.85
COPS4-209ENST00000511653 A0A0G2JS52 829 aa9.76□□□□□ -0.85
COPS4-209ENST00000511653 MYT1Q01538 1121 aa9.76□□□□□ -0.85
COPS4-209ENST00000511653 FAM182BQ5T319 152 aa9.76□□□□□ -0.85
COPS4-209ENST00000511653 FAM163AQ96GL9 167 aaPredicted RBP9.76□□□□□ -0.85
COPS4-209ENST00000511653 EIF3AQ14152 1382 aaKnown RBP9.75□□□□□ -0.85
COPS4-209ENST00000511653 GPRASP1Q5JY77 1395 aa9.75□□□□□ -0.85
COPS4-209ENST00000511653 WASLO00401 505 aaPredicted RBP9.75□□□□□ -0.85
COPS4-209ENST00000511653 SF3B2Q13435 895 aaKnown RBP9.75□□□□□ -0.85
COPS4-209ENST00000511653 RSPH6AQ9H0K4 717 aa9.75□□□□□ -0.85
COPS4-209ENST00000511653 UTRNP46939 3433 aa9.74□□□□□ -0.85
COPS4-209ENST00000511653 SWT1Q5T5J6 900 aaKnown RBP9.74□□□□□ -0.85
COPS4-209ENST00000511653 DCAF11Q8TEB1 546 aa9.74□□□□□ -0.85
COPS4-209ENST00000511653 VPS9D1Q9Y2B5 631 aa9.74□□□□□ -0.85
COPS4-209ENST00000511653 NRKQ7Z2Y5 1582 aa9.74□□□□□ -0.85
COPS4-209ENST00000511653 SPATA31A5Q5VU36 1347 aa9.74□□□□□ -0.85
COPS4-209ENST00000511653 SPATA31A7Q8IWB4 1347 aa9.74□□□□□ -0.85
COPS4-209ENST00000511653 SLC10A3P09131 477 aa9.74□□□□□ -0.85
COPS4-209ENST00000511653 CLK2P49760 499 aaKnown RBP9.74□□□□□ -0.85
COPS4-209ENST00000511653 ZNF687Q8N1G0 1237 aa9.74□□□□□ -0.85
COPS4-209ENST00000511653 RABGEF1Q9UJ41 708 aa9.74□□□□□ -0.85
COPS4-209ENST00000511653 KIAA0232Q92628 1395 aa9.73□□□□□ -0.85
COPS4-209ENST00000511653 KIAA1210Q9ULL0 1709 aa9.73□□□□□ -0.85
COPS4-209ENST00000511653 NDUFV2P19404 249 aa9.73□□□□□ -0.85
COPS4-209ENST00000511653 NGDNQ8NEJ9 315 aaKnown RBP9.73□□□□□ -0.85
COPS4-209ENST00000511653 HS3ST6Q96QI5 342 aa9.73□□□□□ -0.85
COPS4-209ENST00000511653 LMO7Q8WWI1 1683 aa9.72□□□□□ -0.85
COPS4-209ENST00000511653 RREB1Q92766 1687 aa9.72□□□□□ -0.85
COPS4-209ENST00000511653 MOXD2PA6NHM9 499 aa9.72□□□□□ -0.85
COPS4-209ENST00000511653 BAG6P46379 1132 aa9.72□□□□□ -0.85
COPS4-209ENST00000511653 CHRNA2Q15822 529 aa9.72□□□□□ -0.85
COPS4-209ENST00000511653 ZMYND15Q9H091 742 aa9.72□□□□□ -0.85
COPS4-209ENST00000511653 PRDM11Q9NQV5 511 aa9.72□□□□□ -0.85
COPS4-209ENST00000511653 DISP2A7MBM2 1401 aa9.72□□□□□ -0.85
COPS4-209ENST00000511653 NUP188Q5SRE5 1749 aa9.72□□□□□ -0.85
COPS4-209ENST00000511653 HRCP23327 699 aa9.71□□□□□ -0.85
COPS4-209ENST00000511653 SLC4A5Q9BY07 1137 aa9.71□□□□□ -0.85
COPS4-209ENST00000511653 SPATA31A1Q5TZJ5 1347 aa9.71□□□□□ -0.86
COPS4-209ENST00000511653 NUTM2GQ5VZR2 741 aa9.71□□□□□ -0.86
COPS4-209ENST00000511653 RIC3Q7Z5B4 369 aa9.71□□□□□ -0.86
COPS4-209ENST00000511653 RDH13Q8NBN7 331 aa9.71□□□□□ -0.86
COPS4-209ENST00000511653 HLA-CQ95604 372 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms