RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 A6NJR5 290 aa6.47□□□□□ -1.37
CHD1-207ENST00000511628 SPATA31C2B4DYI2 1134 aa6.47□□□□□ -1.37
CHD1-207ENST00000511628 BACH1O14867 736 aa6.47□□□□□ -1.37
CHD1-207ENST00000511628 ATP9BO43861 1147 aa6.47□□□□□ -1.37
CHD1-207ENST00000511628 INHAP05111 366 aa6.47□□□□□ -1.37
CHD1-207ENST00000511628 ATP1A2P50993 1020 aa6.47□□□□□ -1.37
CHD1-207ENST00000511628 WDR44Q5JSH3 913 aa6.47□□□□□ -1.37
CHD1-207ENST00000511628 C14orf37Q86TY3 774 aa6.47□□□□□ -1.37
CHD1-207ENST00000511628 ZSCAN1Q8NBB4 408 aa6.47□□□□□ -1.37
CHD1-207ENST00000511628 NANOS1Q8WY41 292 aaKnown RBP6.47□□□□□ -1.37
CHD1-207ENST00000511628 AIDAQ96BJ3 306 aa6.47□□□□□ -1.37
CHD1-207ENST00000511628 CNTNAP3BQ96NU0 1288 aa6.47□□□□□ -1.37
CHD1-207ENST00000511628 TRERF1Q96PN7 1200 aa6.47□□□□□ -1.37
CHD1-207ENST00000511628 COL25A1Q9BXS0 654 aaPredicted RBP6.47□□□□□ -1.37
CHD1-207ENST00000511628 CNTNAP3Q9BZ76 1288 aa6.47□□□□□ -1.37
CHD1-207ENST00000511628 GPAMQ9HCL2 828 aa6.47□□□□□ -1.37
CHD1-207ENST00000511628 USP17L3A6NCW0 530 aa6.46□□□□□ -1.38
CHD1-207ENST00000511628 USP17L4A6NCW7 530 aa6.46□□□□□ -1.38
CHD1-207ENST00000511628 F11P03951 625 aa6.46□□□□□ -1.38
CHD1-207ENST00000511628 LCE2CQ5TA81 110 aa6.46□□□□□ -1.38
CHD1-207ENST00000511628 USP17L2Q6R6M4 530 aa6.46□□□□□ -1.38
CHD1-207ENST00000511628 TBC1D9Q6ZT07 1266 aa6.46□□□□□ -1.38
CHD1-207ENST00000511628 USP17L1Q7RTZ2 530 aa6.46□□□□□ -1.38
CHD1-207ENST00000511628 TRIM22Q8IYM9 498 aa6.46□□□□□ -1.38
CHD1-207ENST00000511628 RHBDD1Q8TEB9 315 aa6.46□□□□□ -1.38
CHD1-207ENST00000511628 GMCL1Q96IK5 515 aa6.46□□□□□ -1.38
CHD1-207ENST00000511628 STK17AQ9UEE5 414 aa6.46□□□□□ -1.38
CHD1-207ENST00000511628 A0A1B0GTH6 734 aa6.45□□□□□ -1.38
CHD1-207ENST00000511628 PLA2G4AP47712 749 aa6.45□□□□□ -1.38
CHD1-207ENST00000511628 SMTNP53814 917 aa6.45□□□□□ -1.38
CHD1-207ENST00000511628 ADAMTS19Q8TE59 1207 aa6.45□□□□□ -1.38
CHD1-207ENST00000511628 NIFKQ9BYG3 293 aaKnown RBP6.45□□□□□ -1.38
CHD1-207ENST00000511628 SCNN1DP51172 638 aa6.44□□□□□ -1.38
CHD1-207ENST00000511628 C4orf17Q53FE4 359 aa6.44□□□□□ -1.38
CHD1-207ENST00000511628 EFHC2Q5JST6 749 aa6.44□□□□□ -1.38
CHD1-207ENST00000511628 PPARGC1BQ86YN6 1023 aaKnown RBP6.44□□□□□ -1.38
CHD1-207ENST00000511628 FNBP4Q8N3X1 1017 aaPredicted RBP6.44□□□□□ -1.38
CHD1-207ENST00000511628 GPR161Q8N6U8 529 aaKnown RBP6.44□□□□□ -1.38
CHD1-207ENST00000511628 FHDC1Q9C0D6 1143 aaPredicted RBP6.44□□□□□ -1.38
CHD1-207ENST00000511628 NUCKS1Q9H1E3 243 aaKnown RBP6.44□□□□□ -1.38
CHD1-207ENST00000511628 CABP1Q9NZU7 370 aa6.44□□□□□ -1.38
CHD1-207ENST00000511628 TFIP11Q9UBB9 837 aaKnown RBP6.44□□□□□ -1.38
CHD1-207ENST00000511628 MKRN1Q9UHC7 482 aaKnown RBP6.44□□□□□ -1.38
CHD1-207ENST00000511628 ZNF777Q9ULD5 760 aaPredicted RBP6.44□□□□□ -1.38
CHD1-207ENST00000511628 PCDHGA11Q9Y5H2 935 aa6.44□□□□□ -1.38
CHD1-207ENST00000511628 NBPF1Q3BBV0 1214 aa6.43□□□□□ -1.38
CHD1-207ENST00000511628 PLEKHM2Q8IWE5 1019 aa6.43□□□□□ -1.38
CHD1-207ENST00000511628 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.43□□□□□ -1.38
CHD1-207ENST00000511628 TPCN2Q8NHX9 752 aa6.43□□□□□ -1.38
CHD1-207ENST00000511628 GTPBP3Q969Y2 492 aaKnown RBP6.43□□□□□ -1.38
CHD1-207ENST00000511628 ZNF837Q96EG3 531 aaPredicted RBP6.43□□□□□ -1.38
CHD1-207ENST00000511628 DNAAF2Q9NVR5 837 aaKnown RBP6.43□□□□□ -1.38
CHD1-207ENST00000511628 CUEDC1Q9NWM3 386 aaPredicted RBP6.43□□□□□ -1.38
CHD1-207ENST00000511628 A6NJY4 79 aa6.42□□□□□ -1.38
CHD1-207ENST00000511628 GPR25O00155 361 aa6.42□□□□□ -1.38
CHD1-207ENST00000511628 TATP17735 454 aaPredicted RBP6.42□□□□□ -1.38
CHD1-207ENST00000511628 RASA1P20936 1047 aa6.42□□□□□ -1.38
CHD1-207ENST00000511628 DBN1Q16643 649 aa6.42□□□□□ -1.38
CHD1-207ENST00000511628 ARSJQ5FYB0 599 aaPredicted RBP6.42□□□□□ -1.38
CHD1-207ENST00000511628 CCDC102BQ68D86 513 aa6.42□□□□□ -1.38
CHD1-207ENST00000511628 LARP1Q6PKG0 1096 aaKnown RBP6.42□□□□□ -1.38
CHD1-207ENST00000511628 OGFOD1Q8N543 542 aa6.42□□□□□ -1.38
CHD1-207ENST00000511628 ZNF594Q96JF6 807 aaPredicted RBP6.42□□□□□ -1.38
CHD1-207ENST00000511628 UCN2Q96RP3 112 aa6.42□□□□□ -1.38
CHD1-207ENST00000511628 RUBCNLQ9H714 662 aa6.42□□□□□ -1.38
CHD1-207ENST00000511628 ZNF232Q9UNY5 417 aa6.42□□□□□ -1.38
CHD1-207ENST00000511628 NSFL1CQ9UNZ2 370 aaKnown RBP6.42□□□□□ -1.38
CHD1-207ENST00000511628 CHMP3Q9Y3E7 222 aa6.42□□□□□ -1.38
CHD1-207ENST00000511628 HRH3Q9Y5N1 445 aa6.42□□□□□ -1.38
CHD1-207ENST00000511628 GJA3Q9Y6H8 435 aa6.42□□□□□ -1.38
CHD1-207ENST00000511628 PALM3A6NDB9 673 aaPredicted RBP6.41□□□□□ -1.38
CHD1-207ENST00000511628 TMEM229AB2RXF0 380 aa6.41□□□□□ -1.38
CHD1-207ENST00000511628 CDK2AP1O14519 115 aa6.41□□□□□ -1.38
CHD1-207ENST00000511628 MSX1P28360 303 aa6.41□□□□□ -1.38
CHD1-207ENST00000511628 LMOD1P29536 600 aaPredicted RBP6.41□□□□□ -1.38
CHD1-207ENST00000511628 BICDL1Q6ZP65 573 aa6.41□□□□□ -1.38
CHD1-207ENST00000511628 NEUROD4Q9HD90 331 aa6.41□□□□□ -1.38
CHD1-207ENST00000511628 ZNF358Q9NW07 568 aa6.41□□□□□ -1.38
CHD1-207ENST00000511628 PHF24Q9UPV7 400 aa6.41□□□□□ -1.38
CHD1-207ENST00000511628 RNFT1Q5M7Z0 435 aa6.4□□□□□ -1.38
CHD1-207ENST00000511628 LARGE2Q8N3Y3 721 aa6.4□□□□□ -1.38
CHD1-207ENST00000511628 SVOPQ8N4V2 548 aa6.4□□□□□ -1.38
CHD1-207ENST00000511628 SLC4A9Q96Q91 983 aa6.4□□□□□ -1.38
CHD1-207ENST00000511628 PPP1R12CQ9BZL4 782 aa6.4□□□□□ -1.38
CHD1-207ENST00000511628 MAFBQ9Y5Q3 323 aaPredicted RBP6.4□□□□□ -1.38
CHD1-207ENST00000511628 MX2P20592 715 aa6.39□□□□□ -1.39
CHD1-207ENST00000511628 MAP3K10Q02779 954 aa6.39□□□□□ -1.39
CHD1-207ENST00000511628 TNS4Q8IZW8 715 aa6.39□□□□□ -1.39
CHD1-207ENST00000511628 VRTNQ9H8Y1 702 aa6.39□□□□□ -1.39
CHD1-207ENST00000511628 CLDN10P78369 228 aa6.38□□□□□ -1.39
CHD1-207ENST00000511628 ERICH6Q7L0X2 663 aa6.38□□□□□ -1.39
CHD1-207ENST00000511628 C1orf216Q8TAB5 229 aa6.38□□□□□ -1.39
CHD1-207ENST00000511628 HINFPQ9BQA5 517 aa6.38□□□□□ -1.39
CHD1-207ENST00000511628 MBIPQ9NS73 344 aa6.38□□□□□ -1.39
CHD1-207ENST00000511628 SCHIP1Q9P0W5 487 aaPredicted RBP6.38□□□□□ -1.39
CHD1-207ENST00000511628 PARP3Q9Y6F1 533 aa6.38□□□□□ -1.39
CHD1-207ENST00000511628 ADAMTS2O95450 1211 aa6.37□□□□□ -1.39
CHD1-207ENST00000511628 KRT76Q01546 638 aa6.37□□□□□ -1.39
CHD1-207ENST00000511628 SRSF11Q05519 484 aaKnown RBP6.37□□□□□ -1.39
CHD1-207ENST00000511628 LBRQ14739 615 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms