RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 PNMA6AP0CW24 399 aaPredicted RBP8.72□□□□□ -1.01
CPNE4-208ENST00000511604 NBPF11Q86T75 865 aa8.72□□□□□ -1.01
CPNE4-208ENST00000511604 ANKRD20A12PQ8NF67 263 aa8.72□□□□□ -1.01
CPNE4-208ENST00000511604 ZBTB40Q9NUA8 1239 aa8.72□□□□□ -1.01
CPNE4-208ENST00000511604 IFT57Q9NWB7 429 aa8.72□□□□□ -1.01
CPNE4-208ENST00000511604 ABCC2Q92887 1545 aa8.71□□□□□ -1.01
CPNE4-208ENST00000511604 POLR3GO15318 223 aaPredicted RBP8.71□□□□□ -1.02
CPNE4-208ENST00000511604 GSPT1P15170 499 aaKnown RBP8.71□□□□□ -1.02
CPNE4-208ENST00000511604 EXOSC9Q06265 439 aaKnown RBP8.71□□□□□ -1.02
CPNE4-208ENST00000511604 OS9Q13438 667 aaPredicted RBP8.71□□□□□ -1.02
CPNE4-208ENST00000511604 RABEP1Q15276 862 aa8.71□□□□□ -1.02
CPNE4-208ENST00000511604 NBPF9Q3BBW0 867 aa8.71□□□□□ -1.02
CPNE4-208ENST00000511604 ZNF592Q92610 1267 aa8.71□□□□□ -1.02
CPNE4-208ENST00000511604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.71□□□□□ -1.02
CPNE4-208ENST00000511604 PLA2R1Q13018 1463 aa8.71□□□□□ -1.02
CPNE4-208ENST00000511604 H2AFXP16104 143 aaPredicted RBP8.71□□□□□ -1.02
CPNE4-208ENST00000511604 PPP2R5AQ15172 486 aa8.71□□□□□ -1.02
CPNE4-208ENST00000511604 NBPF10Q6P3W6 841 aaKnown RBP8.71□□□□□ -1.02
CPNE4-208ENST00000511604 C16orf71Q8IYS4 520 aaPredicted RBP8.71□□□□□ -1.02
CPNE4-208ENST00000511604 ADGRL1O94910 1474 aa8.7□□□□□ -1.02
CPNE4-208ENST00000511604 PRDM15P57071 1507 aaPredicted RBP8.7□□□□□ -1.02
CPNE4-208ENST00000511604 PTGS1P23219 599 aa8.7□□□□□ -1.02
CPNE4-208ENST00000511604 BMP2KLQ5H9B9 411 aa8.7□□□□□ -1.02
CPNE4-208ENST00000511604 RNF20Q5VTR2 975 aa8.7□□□□□ -1.02
CPNE4-208ENST00000511604 CEP135Q66GS9 1140 aa8.7□□□□□ -1.02
CPNE4-208ENST00000511604 RPAINQ86UA6 219 aa8.7□□□□□ -1.02
CPNE4-208ENST00000511604 CALR3Q96L12 384 aaKnown RBP8.7□□□□□ -1.02
CPNE4-208ENST00000511604 CEP89Q96ST8 783 aa8.7□□□□□ -1.02
CPNE4-208ENST00000511604 PHF23Q9BUL5 403 aaPredicted RBP8.7□□□□□ -1.02
CPNE4-208ENST00000511604 ERBB3P21860 1342 aa8.7□□□□□ -1.02
CPNE4-208ENST00000511604 SSR1P43307 286 aaKnown RBP8.7□□□□□ -1.02
CPNE4-208ENST00000511604 TRDNQ13061 729 aa8.7□□□□□ -1.02
CPNE4-208ENST00000511604 BIRC2Q13490 618 aa8.7□□□□□ -1.02
CPNE4-208ENST00000511604 IQUBQ8NA54 791 aa8.7□□□□□ -1.02
CPNE4-208ENST00000511604 EXOC6BQ9Y2D4 811 aa8.7□□□□□ -1.02
CPNE4-208ENST00000511604 CCDC196A0A1B0GTZ2 297 aa8.69□□□□□ -1.02
CPNE4-208ENST00000511604 CALRP27797 417 aaKnown RBP8.69□□□□□ -1.02
CPNE4-208ENST00000511604 HNRNPMP52272 730 aaKnown RBP eCLIP8.69□□□□□ -1.02
CPNE4-208ENST00000511604 NOL8Q76FK4 1167 aaKnown RBP8.69□□□□□ -1.02
CPNE4-208ENST00000511604 SIRT2Q8IXJ6 389 aa8.69□□□□□ -1.02
CPNE4-208ENST00000511604 JMYQ8N9B5 988 aa8.69□□□□□ -1.02
CPNE4-208ENST00000511604 PPM1EQ8WY54 764 aa8.69□□□□□ -1.02
CPNE4-208ENST00000511604 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.69□□□□□ -1.02
CPNE4-208ENST00000511604 LMTK3Q96Q04 1460 aa8.69□□□□□ -1.02
CPNE4-208ENST00000511604 U2SURPO15042 1029 aaKnown RBP8.69□□□□□ -1.02
CPNE4-208ENST00000511604 TPD52L1Q16890 204 aaPredicted RBP8.69□□□□□ -1.02
CPNE4-208ENST00000511604 MMS22LQ6ZRQ5 1243 aa8.69□□□□□ -1.02
CPNE4-208ENST00000511604 OTUD7AQ8TE49 926 aaPredicted RBP8.69□□□□□ -1.02
CPNE4-208ENST00000511604 ASXL1Q8IXJ9 1541 aa8.68□□□□□ -1.02
CPNE4-208ENST00000511604 KANK1Q14678 1352 aa8.68□□□□□ -1.02
CPNE4-208ENST00000511604 TTC36A6NLP5 189 aa8.68□□□□□ -1.02
CPNE4-208ENST00000511604 CLCN6P51797 869 aa8.68□□□□□ -1.02
CPNE4-208ENST00000511604 LRMPQ12912 555 aa8.68□□□□□ -1.02
CPNE4-208ENST00000511604 C11orf91Q3C1V1 193 aa8.68□□□□□ -1.02
CPNE4-208ENST00000511604 MAP9Q49MG5 647 aa8.68□□□□□ -1.02
CPNE4-208ENST00000511604 ATF7IPQ6VMQ6 1270 aa8.68□□□□□ -1.02
CPNE4-208ENST00000511604 CFAP44Q96MT7 982 aa8.68□□□□□ -1.02
CPNE4-208ENST00000511604 NUP160Q12769 1436 aa8.68□□□□□ -1.02
CPNE4-208ENST00000511604 YEATS2Q9ULM3 1422 aa8.68□□□□□ -1.02
CPNE4-208ENST00000511604 GRIN2AQ12879 1464 aa8.68□□□□□ -1.02
CPNE4-208ENST00000511604 ATAD2Q6PL18 1390 aa8.68□□□□□ -1.02
CPNE4-208ENST00000511604 KIF3CO14782 793 aa8.68□□□□□ -1.02
CPNE4-208ENST00000511604 ZKSCAN8Q15776 578 aaPredicted RBP8.68□□□□□ -1.02
CPNE4-208ENST00000511604 CCDC183Q5T5S1 534 aa8.68□□□□□ -1.02
CPNE4-208ENST00000511604 RUNDC1Q96C34 613 aa8.68□□□□□ -1.02
CPNE4-208ENST00000511604 AK7Q96M32 723 aa8.68□□□□□ -1.02
CPNE4-208ENST00000511604 USP26Q9BXU7 913 aa8.68□□□□□ -1.02
CPNE4-208ENST00000511604 BSDC1Q9NW68 430 aaPredicted RBP8.68□□□□□ -1.02
CPNE4-208ENST00000511604 KLHL33A6NCF5 533 aa8.67□□□□□ -1.02
CPNE4-208ENST00000511604 EIF3CLB5ME19 914 aaKnown RBP8.67□□□□□ -1.02
CPNE4-208ENST00000511604 SLU7O95391 586 aaKnown RBP8.67□□□□□ -1.02
CPNE4-208ENST00000511604 BORCS6Q96GS4 357 aa8.67□□□□□ -1.02
CPNE4-208ENST00000511604 EIF3CQ99613 913 aaKnown RBP8.67□□□□□ -1.02
CPNE4-208ENST00000511604 DDX19BQ9UMR2 479 aa8.67□□□□□ -1.02
CPNE4-208ENST00000511604 SCAF11Q99590 1463 aaKnown RBP8.67□□□□□ -1.02
CPNE4-208ENST00000511604 GPATCH8Q9UKJ3 1502 aaKnown RBP8.67□□□□□ -1.02
CPNE4-208ENST00000511604 NPHP1O15259 732 aa8.66□□□□□ -1.02
CPNE4-208ENST00000511604 ZRANB2O95218 330 aaKnown RBP eCLIP8.66□□□□□ -1.02
CPNE4-208ENST00000511604 ACTN2P35609 894 aa8.66□□□□□ -1.02
CPNE4-208ENST00000511604 NBPF6Q5VWK0 638 aa8.66□□□□□ -1.02
CPNE4-208ENST00000511604 CCDC186Q7Z3E2 898 aa8.66□□□□□ -1.02
CPNE4-208ENST00000511604 NBPF5PQ86XG9 351 aaPredicted RBP8.66□□□□□ -1.02
CPNE4-208ENST00000511604 REXO1L1PQ8IX06 675 aa8.66□□□□□ -1.02
CPNE4-208ENST00000511604 NBPF4Q96M43 638 aa8.66□□□□□ -1.02
CPNE4-208ENST00000511604 UBXN6Q9BZV1 441 aa8.66□□□□□ -1.02
CPNE4-208ENST00000511604 TERF2IPQ9NYB0 399 aa8.66□□□□□ -1.02
CPNE4-208ENST00000511604 ZBTB12Q9Y330 459 aaPredicted RBP8.66□□□□□ -1.02
CPNE4-208ENST00000511604 PPIP5K1Q6PFW1 1433 aa8.66□□□□□ -1.02
CPNE4-208ENST00000511604 IVLP07476 585 aa8.66□□□□□ -1.02
CPNE4-208ENST00000511604 FAM69CQ0P6D2 419 aa8.66□□□□□ -1.02
CPNE4-208ENST00000511604 PSD3Q9NYI0 1048 aa8.66□□□□□ -1.02
CPNE4-208ENST00000511604 ADGRL2O95490 1459 aa8.66□□□□□ -1.02
CPNE4-208ENST00000511604 CUL7Q14999 1698 aa8.66□□□□□ -1.02
CPNE4-208ENST00000511604 BRD1O95696 1058 aa8.65□□□□□ -1.02
CPNE4-208ENST00000511604 CPP00450 1065 aa8.65□□□□□ -1.02
CPNE4-208ENST00000511604 USP48Q86UV5 1035 aa8.65□□□□□ -1.02
CPNE4-208ENST00000511604 WDR63Q8IWG1 891 aa8.65□□□□□ -1.02
CPNE4-208ENST00000511604 ZCCHC17Q9NP64 241 aaKnown RBP8.65□□□□□ -1.02
CPNE4-208ENST00000511604 CFAP74Q9C0B2 1584 aa8.65□□□□□ -1.02
CPNE4-208ENST00000511604 NPM1P06748 294 aaKnown RBP eCLIP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms