RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 GNPATO15228 680 aa11.97□□□□□ -0.49
POLR2J3-215ENST00000511313 ATF7IPQ6VMQ6 1270 aa11.97□□□□□ -0.49
POLR2J3-215ENST00000511313 CCAR1Q8IX12 1150 aaKnown RBP11.97□□□□□ -0.49
POLR2J3-215ENST00000511313 TBC1D2BQ9UPU7 963 aa11.97□□□□□ -0.49
POLR2J3-215ENST00000511313 ZNF622Q969S3 477 aaKnown RBP eCLIP11.97□□□□□ -0.49
POLR2J3-215ENST00000511313 ACSBG1Q96GR2 724 aa11.97□□□□□ -0.49
POLR2J3-215ENST00000511313 CCDC152Q4G0S7 254 aa11.96□□□□□ -0.49
POLR2J3-215ENST00000511313 FBXW7Q969H0 707 aa11.96□□□□□ -0.49
POLR2J3-215ENST00000511313 PTCD1O75127 700 aaKnown RBP11.96□□□□□ -0.49
POLR2J3-215ENST00000511313 ZNF142P52746 1687 aaPredicted RBP11.96□□□□□ -0.49
POLR2J3-215ENST00000511313 LDHCP07864 332 aa11.96□□□□□ -0.5
POLR2J3-215ENST00000511313 ZSCAN25Q6NSZ9 544 aa11.96□□□□□ -0.5
POLR2J3-215ENST00000511313 KIAA1211Q6ZU35 1233 aa11.96□□□□□ -0.5
POLR2J3-215ENST00000511313 ANKRD2Q9GZV1 360 aa11.96□□□□□ -0.5
POLR2J3-215ENST00000511313 AKAP2Q9Y2D5 859 aa11.96□□□□□ -0.5
POLR2J3-215ENST00000511313 SPATA31A5Q5VU36 1347 aa11.96□□□□□ -0.5
POLR2J3-215ENST00000511313 SPATA31A7Q8IWB4 1347 aa11.96□□□□□ -0.5
POLR2J3-215ENST00000511313 FNBP4Q8N3X1 1017 aaPredicted RBP11.95□□□□□ -0.5
POLR2J3-215ENST00000511313 CDK12Q9NYV4 1490 aaPredicted RBP11.95□□□□□ -0.5
POLR2J3-215ENST00000511313 TRPM1Q7Z4N2 1603 aa11.95□□□□□ -0.5
POLR2J3-215ENST00000511313 ZGPATQ8N5A5 531 aaKnown RBP11.95□□□□□ -0.5
POLR2J3-215ENST00000511313 CNNM1Q9NRU3 951 aa11.95□□□□□ -0.5
POLR2J3-215ENST00000511313 NEXMIFQ5QGS0 1516 aa11.95□□□□□ -0.5
POLR2J3-215ENST00000511313 TRIM37O94972 964 aa11.94□□□□□ -0.5
POLR2J3-215ENST00000511313 CAVIN4Q5BKX8 364 aa11.94□□□□□ -0.5
POLR2J3-215ENST00000511313 SPTY2D1Q68D10 685 aaPredicted RBP11.94□□□□□ -0.5
POLR2J3-215ENST00000511313 VSIG10Q8N0Z9 540 aa11.94□□□□□ -0.5
POLR2J3-215ENST00000511313 CNBD1Q8NA66 436 aa11.94□□□□□ -0.5
POLR2J3-215ENST00000511313 EMILIN1Q9Y6C2 1016 aa11.94□□□□□ -0.5
POLR2J3-215ENST00000511313 E9PCH4 1651 aa11.94□□□□□ -0.5
POLR2J3-215ENST00000511313 IFIT1P09914 478 aaKnown RBP11.94□□□□□ -0.5
POLR2J3-215ENST00000511313 BCL2L13Q9BXK5 485 aa11.94□□□□□ -0.5
POLR2J3-215ENST00000511313 SRCIN1Q9C0H9 1055 aa11.94□□□□□ -0.5
POLR2J3-215ENST00000511313 ZNF287Q9HBT7 754 aa11.94□□□□□ -0.5
POLR2J3-215ENST00000511313 NCAPD2Q15021 1401 aa11.94□□□□□ -0.5
POLR2J3-215ENST00000511313 UBTFL1P0CB47 393 aaPredicted RBP11.93□□□□□ -0.5
POLR2J3-215ENST00000511313 UTP14AQ9BVJ6 771 aaKnown RBP11.93□□□□□ -0.5
POLR2J3-215ENST00000511313 SPATA31A1Q5TZJ5 1347 aa11.93□□□□□ -0.5
POLR2J3-215ENST00000511313 RNF123Q5XPI4 1314 aa11.93□□□□□ -0.5
POLR2J3-215ENST00000511313 CERS3Q8IU89 383 aa11.93□□□□□ -0.5
POLR2J3-215ENST00000511313 PLEKHH1Q9ULM0 1364 aa11.93□□□□□ -0.5
POLR2J3-215ENST00000511313 LRRIQ1Q96JM4 1722 aa11.93□□□□□ -0.5
POLR2J3-215ENST00000511313 DDX19BQ9UMR2 479 aa11.93□□□□□ -0.5
POLR2J3-215ENST00000511313 SSFA2P28290 1259 aa11.92□□□□□ -0.5
POLR2J3-215ENST00000511313 OGFOD1Q8N543 542 aa11.92□□□□□ -0.5
POLR2J3-215ENST00000511313 TRMT112Q9UI30 125 aaKnown RBP11.92□□□□□ -0.5
POLR2J3-215ENST00000511313 ERBB3P21860 1342 aa11.92□□□□□ -0.5
POLR2J3-215ENST00000511313 ERC2O15083 957 aa11.92□□□□□ -0.5
POLR2J3-215ENST00000511313 PRIM1P49642 420 aaKnown RBP11.92□□□□□ -0.5
POLR2J3-215ENST00000511313 RNMTO43148 476 aaKnown RBP11.91□□□□□ -0.5
POLR2J3-215ENST00000511313 PHF14O94880 888 aa11.91□□□□□ -0.5
POLR2J3-215ENST00000511313 TNNI2P48788 182 aa11.91□□□□□ -0.5
POLR2J3-215ENST00000511313 FGD1P98174 961 aa11.91□□□□□ -0.5
POLR2J3-215ENST00000511313 AIMP1Q12904 312 aaKnown RBP11.91□□□□□ -0.5
POLR2J3-215ENST00000511313 EIF4A2Q14240 407 aaKnown RBP11.91□□□□□ -0.5
POLR2J3-215ENST00000511313 BCL11AQ9H165 835 aa11.91□□□□□ -0.5
POLR2J3-215ENST00000511313 ANKRD18BA2A2Z9 1011 aa11.91□□□□□ -0.5
POLR2J3-215ENST00000511313 TWISTNBQ3B726 338 aaPredicted RBP11.91□□□□□ -0.5
POLR2J3-215ENST00000511313 RUFY2Q8WXA3 655 aa11.91□□□□□ -0.5
POLR2J3-215ENST00000511313 ISY1Q9ULR0 285 aaKnown RBP11.91□□□□□ -0.5
POLR2J3-215ENST00000511313 MAST3O60307 1309 aa11.91□□□□□ -0.5
POLR2J3-215ENST00000511313 APAF1O14727 1248 aa11.91□□□□□ -0.5
POLR2J3-215ENST00000511313 CCDC158Q5M9N0 1113 aa11.91□□□□□ -0.5
POLR2J3-215ENST00000511313 DZIP3Q86Y13 1208 aaKnown RBP11.91□□□□□ -0.5
POLR2J3-215ENST00000511313 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.91□□□□□ -0.5
POLR2J3-215ENST00000511313 CPSF1Q10570 1443 aaKnown RBP11.91□□□□□ -0.5
POLR2J3-215ENST00000511313 SSH2Q76I76 1423 aa11.9□□□□□ -0.5
POLR2J3-215ENST00000511313 ITPRIPQ8IWB1 547 aa11.9□□□□□ -0.5
POLR2J3-215ENST00000511313 CWC25Q9NXE8 425 aaPredicted RBP11.9□□□□□ -0.5
POLR2J3-215ENST00000511313 TMEM131LA2VDJ0 1609 aa11.9□□□□□ -0.5
POLR2J3-215ENST00000511313 USP19O94966 1318 aa11.9□□□□□ -0.5
POLR2J3-215ENST00000511313 SOCS7O14512 581 aa11.9□□□□□ -0.5
POLR2J3-215ENST00000511313 BICDL1Q6ZP65 573 aa11.9□□□□□ -0.5
POLR2J3-215ENST00000511313 GSTO1P78417 241 aa11.9□□□□□ -0.5
POLR2J3-215ENST00000511313 POLKQ9UBT6 870 aa11.9□□□□□ -0.51
POLR2J3-215ENST00000511313 CLEC11AQ9Y240 323 aa11.9□□□□□ -0.51
POLR2J3-215ENST00000511313 FAM83GA6ND36 823 aa11.89□□□□□ -0.51
POLR2J3-215ENST00000511313 HSP90AB2PQ58FF8 381 aa11.89□□□□□ -0.51
POLR2J3-215ENST00000511313 RC3H1Q5TC82 1133 aaKnown RBP11.89□□□□□ -0.51
POLR2J3-215ENST00000511313 CEP126Q9P2H0 1117 aa11.89□□□□□ -0.51
POLR2J3-215ENST00000511313 KIAA1210Q9ULL0 1709 aa11.89□□□□□ -0.51
POLR2J3-215ENST00000511313 RGL2O15211 777 aa11.89□□□□□ -0.51
POLR2J3-215ENST00000511313 SLC52A2Q9HAB3 445 aa11.89□□□□□ -0.51
POLR2J3-215ENST00000511313 KDM2BQ8NHM5 1336 aa11.89□□□□□ -0.51
POLR2J3-215ENST00000511313 CCDC146Q8IYE0 955 aa11.88□□□□□ -0.51
POLR2J3-215ENST00000511313 EYA1Q99502 592 aa11.88□□□□□ -0.51
POLR2J3-215ENST00000511313 IFIT2P09913 472 aaKnown RBP11.88□□□□□ -0.51
POLR2J3-215ENST00000511313 TMPOP42166 694 aaKnown RBP11.88□□□□□ -0.51
POLR2J3-215ENST00000511313 POLR1AO95602 1720 aaPredicted RBP11.88□□□□□ -0.51
POLR2J3-215ENST00000511313 HIP1O00291 1037 aa11.88□□□□□ -0.51
POLR2J3-215ENST00000511313 ERICH6BQ5W0A0 696 aa11.88□□□□□ -0.51
POLR2J3-215ENST00000511313 PTPRUQ92729 1446 aa11.87□□□□□ -0.51
POLR2J3-215ENST00000511313 PAXIP1Q6ZW49 1069 aaPredicted RBP11.87□□□□□ -0.51
POLR2J3-215ENST00000511313 RTKN2Q8IZC4 609 aa11.87□□□□□ -0.51
POLR2J3-215ENST00000511313 USHBP1Q8N6Y0 703 aa11.87□□□□□ -0.51
POLR2J3-215ENST00000511313 ANKIB1Q9P2G1 1089 aa11.87□□□□□ -0.51
POLR2J3-215ENST00000511313 SLC5A1P13866 664 aa11.87□□□□□ -0.51
POLR2J3-215ENST00000511313 MMP14P50281 582 aa11.87□□□□□ -0.51
POLR2J3-215ENST00000511313 IFIT5Q13325 482 aaKnown RBP11.87□□□□□ -0.51
POLR2J3-215ENST00000511313 TNIP1Q15025 636 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms