RNA–Protein interactions for RNA: ENST00000511303.5

SGCA-207, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-207ENST00000511303 PARP4Q9UKK3 1724 aaKnown RBP15.31■□□□□ 0.04
SGCA-207ENST00000511303 CABP4P57796 275 aa15.3■□□□□ 0.04
SGCA-207ENST00000511303 TSPYL6Q8N831 410 aa15.3■□□□□ 0.04
SGCA-207ENST00000511303 SSH1Q8WYL5 1049 aa15.3■□□□□ 0.04
SGCA-207ENST00000511303 SMC4Q9NTJ3 1288 aa15.3■□□□□ 0.04
SGCA-207ENST00000511303 MIS18AQ9NYP9 233 aa15.3■□□□□ 0.04
SGCA-207ENST00000511303 ADAMTS7Q9UKP4 1686 aa15.3■□□□□ 0.04
SGCA-207ENST00000511303 EIF4A1P60842 406 aaKnown RBP15.29■□□□□ 0.04
SGCA-207ENST00000511303 DDX54Q8TDD1 881 aaKnown RBP15.29■□□□□ 0.04
SGCA-207ENST00000511303 KDM6AO15550 1401 aaPredicted RBP15.28■□□□□ 0.04
SGCA-207ENST00000511303 AAMPQ13685 434 aa15.28■□□□□ 0.04
SGCA-207ENST00000511303 NFATC2IPQ8NCF5 419 aa15.28■□□□□ 0.04
SGCA-207ENST00000511303 CCDC9Q9Y3X0 531 aaKnown RBP15.28■□□□□ 0.04
SGCA-207ENST00000511303 PLCH1Q4KWH8 1693 aa15.28■□□□□ 0.04
SGCA-207ENST00000511303 LRP6O75581 1613 aa15.28■□□□□ 0.04
SGCA-207ENST00000511303 NRAPQ86VF7 1730 aa15.27■□□□□ 0.04
SGCA-207ENST00000511303 DDB1Q16531 1140 aa15.27■□□□□ 0.04
SGCA-207ENST00000511303 CCDC30Q5VVM6 783 aa15.27■□□□□ 0.04
SGCA-207ENST00000511303 ZKSCAN2Q63HK3 967 aa15.27■□□□□ 0.04
SGCA-207ENST00000511303 ZNF790Q6PG37 636 aa15.27■□□□□ 0.04
SGCA-207ENST00000511303 HEG1Q9ULI3 1381 aa15.26■□□□□ 0.03
SGCA-207ENST00000511303 ELL2O00472 640 aaPredicted RBP15.26■□□□□ 0.03
SGCA-207ENST00000511303 CANXP27824 592 aaKnown RBP15.26■□□□□ 0.03
SGCA-207ENST00000511303 MRPL50Q8N5N7 158 aaKnown RBP15.26■□□□□ 0.03
SGCA-207ENST00000511303 PPP4R2Q9NY27 417 aa15.26■□□□□ 0.03
SGCA-207ENST00000511303 TRPC5Q9UL62 973 aaPredicted RBP15.26■□□□□ 0.03
SGCA-207ENST00000511303 MRC1P22897 1456 aa15.26■□□□□ 0.03
SGCA-207ENST00000511303 PLIN1O60240 522 aa15.25■□□□□ 0.03
SGCA-207ENST00000511303 ONECUT3O60422 494 aaPredicted RBP15.25■□□□□ 0.03
SGCA-207ENST00000511303 TNS2Q63HR2 1409 aa15.25■□□□□ 0.03
SGCA-207ENST00000511303 AFF2P51816 1311 aa15.24■□□□□ 0.03
SGCA-207ENST00000511303 ATF7IPQ6VMQ6 1270 aa15.24■□□□□ 0.03
SGCA-207ENST00000511303 TTC5Q8N0Z6 440 aa15.24■□□□□ 0.03
SGCA-207ENST00000511303 FRAT1Q92837 279 aaPredicted RBP15.24■□□□□ 0.03
SGCA-207ENST00000511303 GJD4Q96KN9 370 aaPredicted RBP15.24■□□□□ 0.03
SGCA-207ENST00000511303 STK31Q9BXU1 1019 aa15.24■□□□□ 0.03
SGCA-207ENST00000511303 GIGYF1O75420 1035 aaPredicted RBP15.23■□□□□ 0.03
SGCA-207ENST00000511303 API5Q9BZZ5 524 aaKnown RBP15.23■□□□□ 0.03
SGCA-207ENST00000511303 NOB1Q9ULX3 412 aaKnown RBP15.23■□□□□ 0.03
SGCA-207ENST00000511303 PTPRCP08575 1304 aa15.22■□□□□ 0.03
SGCA-207ENST00000511303 IRX6P78412 446 aaPredicted RBP15.22■□□□□ 0.03
SGCA-207ENST00000511303 KRT24Q2M2I5 525 aa15.22■□□□□ 0.03
SGCA-207ENST00000511303 DZIP1LQ8IYY4 767 aaKnown RBP15.22■□□□□ 0.03
SGCA-207ENST00000511303 FMNL2Q96PY5 1086 aa15.22■□□□□ 0.03
SGCA-207ENST00000511303 BCL2L13Q9BXK5 485 aa15.22■□□□□ 0.03
SGCA-207ENST00000511303 CHMP4BQ9H444 224 aaKnown RBP15.22■□□□□ 0.03
SGCA-207ENST00000511303 TMOD3Q9NYL9 352 aa15.22■□□□□ 0.03
SGCA-207ENST00000511303 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.21■□□□□ 0.03
SGCA-207ENST00000511303 ATRNO75882 1429 aa15.21■□□□□ 0.03
SGCA-207ENST00000511303 SLC4A2P04920 1241 aa15.21■□□□□ 0.03
SGCA-207ENST00000511303 SNRPA1P09661 255 aaKnown RBP15.21■□□□□ 0.03
SGCA-207ENST00000511303 FAM98CQ17RN3 349 aaKnown RBP15.21■□□□□ 0.03
SGCA-207ENST00000511303 SCN11AQ9UI33 1791 aa15.21■□□□□ 0.02
SGCA-207ENST00000511303 KCNQ3O43525 872 aa15.2■□□□□ 0.02
SGCA-207ENST00000511303 HDGFL1Q5TGJ6 251 aa15.2■□□□□ 0.02
SGCA-207ENST00000511303 ZNF772Q68DY9 489 aaPredicted RBP15.2■□□□□ 0.02
SGCA-207ENST00000511303 FTSJ3Q8IY81 847 aaKnown RBP15.2■□□□□ 0.02
SGCA-207ENST00000511303 QTRT2Q9H974 415 aaKnown RBP15.2■□□□□ 0.02
SGCA-207ENST00000511303 TRIM27P14373 513 aa15.19■□□□□ 0.02
SGCA-207ENST00000511303 C20orf194Q5TEA3 1177 aa15.19■□□□□ 0.02
SGCA-207ENST00000511303 MARCH10Q8NA82 808 aaPredicted RBP15.19■□□□□ 0.02
SGCA-207ENST00000511303 TEX13AQ9BXU3 409 aaPredicted RBP15.19■□□□□ 0.02
SGCA-207ENST00000511303 DBF4Q9UBU7 674 aaPredicted RBP15.19■□□□□ 0.02
SGCA-207ENST00000511303 SLC39A6Q13433 755 aa15.18■□□□□ 0.02
SGCA-207ENST00000511303 VSIG10Q8N0Z9 540 aa15.18■□□□□ 0.02
SGCA-207ENST00000511303 EXOC6Q8TAG9 804 aa15.18■□□□□ 0.02
SGCA-207ENST00000511303 ZNF496Q96IT1 587 aaPredicted RBP15.18■□□□□ 0.02
SGCA-207ENST00000511303 CRBNQ96SW2 442 aa15.18■□□□□ 0.02
SGCA-207ENST00000511303 SIPA1L3O60292 1781 aaPredicted RBP15.17■□□□□ 0.02
SGCA-207ENST00000511303 KDM3BQ7LBC6 1761 aa15.17■□□□□ 0.02
SGCA-207ENST00000511303 PIGBQ92521 554 aa15.17■□□□□ 0.02
SGCA-207ENST00000511303 HYPKQ9NX55 129 aa15.17■□□□□ 0.02
SGCA-207ENST00000511303 DDX19BQ9UMR2 479 aa15.17■□□□□ 0.02
SGCA-207ENST00000511303 ERBB4Q15303 1308 aa15.17■□□□□ 0.02
SGCA-207ENST00000511303 MVPQ14764 893 aaKnown RBP15.16■□□□□ 0.02
SGCA-207ENST00000511303 PANK1Q8TE04 598 aa15.16■□□□□ 0.02
SGCA-207ENST00000511303 BCL9O00512 1426 aa15.16■□□□□ 0.02
SGCA-207ENST00000511303 EIF2S2P20042 333 aaKnown RBP15.15■□□□□ 0.02
SGCA-207ENST00000511303 PRIM1P49642 420 aaKnown RBP15.15■□□□□ 0.02
SGCA-207ENST00000511303 DDX21Q9NR30 783 aaKnown RBP eCLIP15.15■□□□□ 0.02
SGCA-207ENST00000511303 ABCC4O15439 1325 aa15.15■□□□□ 0.02
SGCA-207ENST00000511303 SHANK3Q9BYB0 1731 aa15.14■□□□□ 0.01
SGCA-207ENST00000511303 RLBP1P12271 317 aa15.14■□□□□ 0.01
SGCA-207ENST00000511303 FLIIQ13045 1269 aa15.14■□□□□ 0.01
SGCA-207ENST00000511303 INTS3Q68E01 1043 aaKnown RBP15.14■□□□□ 0.01
SGCA-207ENST00000511303 SMARCC1Q92922 1105 aaPredicted RBP15.14■□□□□ 0.01
SGCA-207ENST00000511303 COG6Q9Y2V7 657 aa15.14■□□□□ 0.01
SGCA-207ENST00000511303 WNK3Q9BYP7 1800 aa15.13■□□□□ 0.01
SGCA-207ENST00000511303 TCERG1O14776 1098 aaKnown RBP15.13■□□□□ 0.01
SGCA-207ENST00000511303 CLUAP1Q96AJ1 413 aa15.13■□□□□ 0.01
SGCA-207ENST00000511303 ATG3Q9NT62 314 aa15.13■□□□□ 0.01
SGCA-207ENST00000511303 RBM6P78332 1123 aaKnown RBP15.12■□□□□ 0.01
SGCA-207ENST00000511303 CCDC136Q96JN2 1154 aa15.12■□□□□ 0.01
SGCA-207ENST00000511303 A0A0G2JS52 829 aa15.11■□□□□ 0.01
SGCA-207ENST00000511303 DDX58O95786 925 aaKnown RBP15.11■□□□□ 0.01
SGCA-207ENST00000511303 CCT4P50991 539 aaKnown RBP15.11■□□□□ 0.01
SGCA-207ENST00000511303 MYT1Q01538 1121 aa15.11■□□□□ 0.01
SGCA-207ENST00000511303 SEPT12Q8IYM1 358 aa15.11■□□□□ 0.01
SGCA-207ENST00000511303 TMEM57Q8N5G2 664 aa15.11■□□□□ 0.01
SGCA-207ENST00000511303 CHPF2Q9P2E5 772 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms