RNA–Protein interactions for RNA: ENST00000511115.5

PCDH18-205, Transcript of protocadherin 18, humanhuman

TSL 2 BASIC

Gene PCDH18, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-205ENST00000511115 PCNTO95613 3336 aa11.09□□□□□ -0.63
PCDH18-205ENST00000511115 HMGB2P26583 209 aaKnown RBP11.09□□□□□ -0.63
PCDH18-205ENST00000511115 FSTL1Q12841 308 aa11.09□□□□□ -0.63
PCDH18-205ENST00000511115 MAP3K19Q56UN5 1328 aa11.08□□□□□ -0.64
PCDH18-205ENST00000511115 KIAA1551Q9HCM1 1747 aa11.08□□□□□ -0.64
PCDH18-205ENST00000511115 EDC4Q6P2E9 1401 aaKnown RBP11.08□□□□□ -0.64
PCDH18-205ENST00000511115 PXDNLA1KZ92 1463 aa11.08□□□□□ -0.64
PCDH18-205ENST00000511115 KIF13BQ9NQT8 1826 aa11.08□□□□□ -0.64
PCDH18-205ENST00000511115 FCHSD2O94868 740 aa11.08□□□□□ -0.64
PCDH18-205ENST00000511115 NBPF6Q5VWK0 638 aa11.08□□□□□ -0.64
PCDH18-205ENST00000511115 NBPF4Q96M43 638 aa11.08□□□□□ -0.64
PCDH18-205ENST00000511115 MMP10P09238 476 aa11.07□□□□□ -0.64
PCDH18-205ENST00000511115 HSPA1AP0DMV8 641 aaKnown RBP11.07□□□□□ -0.64
PCDH18-205ENST00000511115 HSPA1BP0DMV9 641 aaKnown RBP11.07□□□□□ -0.64
PCDH18-205ENST00000511115 TATP17735 454 aaPredicted RBP11.07□□□□□ -0.64
PCDH18-205ENST00000511115 SSFA2P28290 1259 aa11.07□□□□□ -0.64
PCDH18-205ENST00000511115 C9orf131Q5VYM1 1079 aa11.07□□□□□ -0.64
PCDH18-205ENST00000511115 RAPGEF4Q8WZA2 1011 aa11.07□□□□□ -0.64
PCDH18-205ENST00000511115 RRAGCQ9HB90 399 aa11.07□□□□□ -0.64
PCDH18-205ENST00000511115 KCPQ6ZWJ8 1503 aa11.06□□□□□ -0.64
PCDH18-205ENST00000511115 TGFB2P61812 414 aa11.06□□□□□ -0.64
PCDH18-205ENST00000511115 LINC00116Q8NCU8 138 aa11.06□□□□□ -0.64
PCDH18-205ENST00000511115 SMARCC1Q92922 1105 aaPredicted RBP11.06□□□□□ -0.64
PCDH18-205ENST00000511115 TESK2Q96S53 571 aa11.06□□□□□ -0.64
PCDH18-205ENST00000511115 A0A1W2PP64 1363 aa11.06□□□□□ -0.64
PCDH18-205ENST00000511115 NSD3Q9BZ95 1437 aa11.05□□□□□ -0.64
PCDH18-205ENST00000511115 GNPATO15228 680 aa11.05□□□□□ -0.64
PCDH18-205ENST00000511115 DPEP1P16444 411 aa11.05□□□□□ -0.64
PCDH18-205ENST00000511115 COG3Q96JB2 828 aa11.05□□□□□ -0.64
PCDH18-205ENST00000511115 TERF2IPQ9NYB0 399 aa11.05□□□□□ -0.64
PCDH18-205ENST00000511115 CGNL1Q0VF96 1302 aa11.05□□□□□ -0.64
PCDH18-205ENST00000511115 PCDH11XQ9BZA7 1347 aa11.05□□□□□ -0.64
PCDH18-205ENST00000511115 PCDH11YQ9BZA8 1340 aa11.05□□□□□ -0.64
PCDH18-205ENST00000511115 PKD1L3Q7Z443 1732 aa11.05□□□□□ -0.64
PCDH18-205ENST00000511115 MAP2P11137 1827 aaKnown RBP11.05□□□□□ -0.64
PCDH18-205ENST00000511115 BRCA1P38398 1863 aaKnown RBP11.04□□□□□ -0.64
PCDH18-205ENST00000511115 KDM2BQ8NHM5 1336 aa11.04□□□□□ -0.64
PCDH18-205ENST00000511115 LOC102724428A0A0B4J2F2 783 aa11.04□□□□□ -0.64
PCDH18-205ENST00000511115 CYP27B1O15528 508 aa11.04□□□□□ -0.64
PCDH18-205ENST00000511115 SIK1P57059 783 aa11.04□□□□□ -0.64
PCDH18-205ENST00000511115 RRS1Q15050 365 aaKnown RBP11.04□□□□□ -0.64
PCDH18-205ENST00000511115 PIGBQ92521 554 aa11.04□□□□□ -0.64
PCDH18-205ENST00000511115 PLEKHG2Q9H7P9 1386 aa11.03□□□□□ -0.64
PCDH18-205ENST00000511115 KIF7Q2M1P5 1343 aa11.03□□□□□ -0.64
PCDH18-205ENST00000511115 SMC1BQ8NDV3 1235 aa11.03□□□□□ -0.64
PCDH18-205ENST00000511115 RNF181Q9P0P0 153 aa11.03□□□□□ -0.64
PCDH18-205ENST00000511115 ARFGEF1Q9Y6D6 1849 aa11.03□□□□□ -0.64
PCDH18-205ENST00000511115 ATP6V1AP38606 617 aa11.02□□□□□ -0.65
PCDH18-205ENST00000511115 DDX10Q13206 875 aaKnown RBP11.02□□□□□ -0.65
PCDH18-205ENST00000511115 ITPK1Q13572 414 aa11.02□□□□□ -0.65
PCDH18-205ENST00000511115 CCDC87Q9NVE4 849 aa11.02□□□□□ -0.65
PCDH18-205ENST00000511115 SBF1O95248 1867 aa11.01□□□□□ -0.65
PCDH18-205ENST00000511115 C10orf71Q711Q0 1435 aa11.01□□□□□ -0.65
PCDH18-205ENST00000511115 WASHC2AQ641Q2 1341 aa11.01□□□□□ -0.65
PCDH18-205ENST00000511115 TNRC6CQ9HCJ0 1690 aaKnown RBP11.01□□□□□ -0.65
PCDH18-205ENST00000511115 SLC34A2O95436 690 aa11.01□□□□□ -0.65
PCDH18-205ENST00000511115 SMG6Q86US8 1419 aaKnown RBP11□□□□□ -0.65
PCDH18-205ENST00000511115 KCNA3P22001 575 aa11□□□□□ -0.65
PCDH18-205ENST00000511115 TRAPPC3LQ5T215 181 aa11□□□□□ -0.65
PCDH18-205ENST00000511115 DIEXFQ68CQ4 756 aaKnown RBP11□□□□□ -0.65
PCDH18-205ENST00000511115 NLGN1Q8N2Q7 840 aa11□□□□□ -0.65
PCDH18-205ENST00000511115 ASAP1Q9ULH1 1129 aa11□□□□□ -0.65
PCDH18-205ENST00000511115 KNSTRNQ9Y448 316 aa11□□□□□ -0.65
PCDH18-205ENST00000511115 PARP3Q9Y6F1 533 aa11□□□□□ -0.65
PCDH18-205ENST00000511115 ANP32CO43423 234 aa10.99□□□□□ -0.65
PCDH18-205ENST00000511115 HSP90AB2PQ58FF8 381 aa10.99□□□□□ -0.65
PCDH18-205ENST00000511115 PIM2Q9P1W9 311 aa10.99□□□□□ -0.65
PCDH18-205ENST00000511115 RTCBQ9Y3I0 505 aaKnown RBP10.99□□□□□ -0.65
PCDH18-205ENST00000511115 C4AP0C0L4 1744 aa10.99□□□□□ -0.65
PCDH18-205ENST00000511115 RTL1A6NKG5 1358 aa10.98□□□□□ -0.65
PCDH18-205ENST00000511115 ARHGEF1Q92888 912 aaKnown RBP10.98□□□□□ -0.65
PCDH18-205ENST00000511115 DCAF5Q96JK2 942 aa10.98□□□□□ -0.65
PCDH18-205ENST00000511115 TMOD3Q9NYL9 352 aa10.98□□□□□ -0.65
PCDH18-205ENST00000511115 GYS1P13807 737 aa10.97□□□□□ -0.65
PCDH18-205ENST00000511115 DALRD3Q5D0E6 543 aaKnown RBP10.97□□□□□ -0.65
PCDH18-205ENST00000511115 GGNBP2Q9H3C7 697 aa10.97□□□□□ -0.65
PCDH18-205ENST00000511115 NKX1-1Q15270 411 aaPredicted RBP10.96□□□□□ -0.65
PCDH18-205ENST00000511115 PANK3Q9H999 370 aa10.96□□□□□ -0.65
PCDH18-205ENST00000511115 CCDC88AQ3V6T2 1871 aa10.95□□□□□ -0.66
PCDH18-205ENST00000511115 CHRNA5P30532 468 aa10.95□□□□□ -0.66
PCDH18-205ENST00000511115 RFC4P35249 363 aa10.95□□□□□ -0.66
PCDH18-205ENST00000511115 RASSF7Q02833 373 aa10.95□□□□□ -0.66
PCDH18-205ENST00000511115 SAMD1Q6SPF0 538 aaPredicted RBP10.95□□□□□ -0.66
PCDH18-205ENST00000511115 ATG3Q9NT62 314 aa10.95□□□□□ -0.66
PCDH18-205ENST00000511115 INSRP06213 1382 aa10.95□□□□□ -0.66
PCDH18-205ENST00000511115 FYB1O15117 783 aa10.94□□□□□ -0.66
PCDH18-205ENST00000511115 VEGFAP15692 232 aaPredicted RBP10.94□□□□□ -0.66
PCDH18-205ENST00000511115 MKRN1Q9UHC7 482 aaKnown RBP10.94□□□□□ -0.66
PCDH18-205ENST00000511115 SPG7Q9UQ90 795 aa10.94□□□□□ -0.66
PCDH18-205ENST00000511115 SLC4A9Q96Q91 983 aa10.93□□□□□ -0.66
PCDH18-205ENST00000511115 MYH14Q7Z406 1995 aaKnown RBP10.93□□□□□ -0.66
PCDH18-205ENST00000511115 GLTPD2A6NH11 291 aa10.92□□□□□ -0.66
PCDH18-205ENST00000511115 FOXN1O15353 648 aa10.92□□□□□ -0.66
PCDH18-205ENST00000511115 RPS6KA4O75676 772 aa10.92□□□□□ -0.66
PCDH18-205ENST00000511115 SRP68Q9UHB9 627 aaKnown RBP10.92□□□□□ -0.66
PCDH18-205ENST00000511115 FLT4P35916 1363 aa10.92□□□□□ -0.66
PCDH18-205ENST00000511115 COL5A3P25940 1745 aaPredicted RBP10.92□□□□□ -0.66
PCDH18-205ENST00000511115 PHKG2P15735 406 aa10.91□□□□□ -0.66
PCDH18-205ENST00000511115 FKBP8Q14318 412 aa10.91□□□□□ -0.66
PCDH18-205ENST00000511115 RALBP1Q15311 655 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms