RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 SND1Q7KZF4 910 aaKnown RBP eCLIP9.86□□□□□ -0.83
CHD1-206ENST00000511067 HINFPQ9BQA5 517 aa9.86□□□□□ -0.83
CHD1-206ENST00000511067 AXIN1O15169 862 aa9.85□□□□□ -0.83
CHD1-206ENST00000511067 INHAP05111 366 aa9.85□□□□□ -0.83
CHD1-206ENST00000511067 SMPD1P17405 629 aa9.85□□□□□ -0.83
CHD1-206ENST00000511067 WEE1P30291 646 aa9.85□□□□□ -0.83
CHD1-206ENST00000511067 CTC1Q2NKJ3 1217 aa9.85□□□□□ -0.83
CHD1-206ENST00000511067 ESCO1Q5FWF5 840 aa9.85□□□□□ -0.83
CHD1-206ENST00000511067 CRIPAKQ8N1N5 446 aa9.85□□□□□ -0.83
CHD1-206ENST00000511067 TSEN2Q8NCE0 465 aaKnown RBP9.85□□□□□ -0.83
CHD1-206ENST00000511067 J3QL48 77 aa9.84□□□□□ -0.83
CHD1-206ENST00000511067 TAS1R3Q7RTX0 852 aa9.84□□□□□ -0.83
CHD1-206ENST00000511067 SLC4A9Q96Q91 983 aa9.84□□□□□ -0.83
CHD1-206ENST00000511067 ETNK1Q9HBU6 452 aa9.84□□□□□ -0.83
CHD1-206ENST00000511067 ADH1AP07327 375 aa9.82□□□□□ -0.84
CHD1-206ENST00000511067 IGFBP4P22692 258 aa9.82□□□□□ -0.84
CHD1-206ENST00000511067 ADD1P35611 737 aaKnown RBP9.82□□□□□ -0.84
CHD1-206ENST00000511067 GAS2L2Q8NHY3 880 aa9.82□□□□□ -0.84
CHD1-206ENST00000511067 PRIMPOLQ96LW4 560 aa9.82□□□□□ -0.84
CHD1-206ENST00000511067 EPHA4P54764 986 aa9.81□□□□□ -0.84
CHD1-206ENST00000511067 MFAP1P55081 439 aaKnown RBP9.81□□□□□ -0.84
CHD1-206ENST00000511067 COL26A1Q96A83 441 aa9.81□□□□□ -0.84
CHD1-206ENST00000511067 POTECB2RU33 542 aa9.8□□□□□ -0.84
CHD1-206ENST00000511067 FOXO3O43524 673 aa9.8□□□□□ -0.84
CHD1-206ENST00000511067 SMCPP49901 116 aaPredicted RBP9.8□□□□□ -0.84
CHD1-206ENST00000511067 Q6ZVU0 165 aa9.8□□□□□ -0.84
CHD1-206ENST00000511067 KLF16Q9BXK1 252 aaPredicted RBP9.8□□□□□ -0.84
CHD1-206ENST00000511067 EGFL7Q9UHF1 273 aa9.8□□□□□ -0.84
CHD1-206ENST00000511067 PTCD1O75127 700 aaKnown RBP9.79□□□□□ -0.84
CHD1-206ENST00000511067 MTFR1Q15390 333 aa9.79□□□□□ -0.84
CHD1-206ENST00000511067 XAGE2Q96GT9 111 aa9.79□□□□□ -0.84
CHD1-206ENST00000511067 DACH1Q9UI36 760 aa9.79□□□□□ -0.84
CHD1-206ENST00000511067 ZIC2O95409 532 aaPredicted RBP9.78□□□□□ -0.84
CHD1-206ENST00000511067 STAU1O95793 577 aaKnown RBP9.78□□□□□ -0.84
CHD1-206ENST00000511067 CCDC27Q2M243 656 aa9.78□□□□□ -0.84
CHD1-206ENST00000511067 TNS4Q8IZW8 715 aa9.78□□□□□ -0.84
CHD1-206ENST00000511067 HPS1Q92902 700 aa9.78□□□□□ -0.84
CHD1-206ENST00000511067 ARHGEF10LQ9HCE6 1279 aa9.78□□□□□ -0.84
CHD1-206ENST00000511067 SERTAD1Q9UHV2 236 aa9.78□□□□□ -0.84
CHD1-206ENST00000511067 SOWAHDA6NJG2 315 aa9.77□□□□□ -0.85
CHD1-206ENST00000511067 SMTNP53814 917 aa9.77□□□□□ -0.85
CHD1-206ENST00000511067 FOXK2Q01167 660 aa9.77□□□□□ -0.85
CHD1-206ENST00000511067 CLN3Q13286 438 aa9.77□□□□□ -0.85
CHD1-206ENST00000511067 FKBP5Q13451 457 aaPredicted RBP9.77□□□□□ -0.85
CHD1-206ENST00000511067 STAG2Q8N3U4 1231 aa9.77□□□□□ -0.85
CHD1-206ENST00000511067 ITPKCQ96DU7 683 aa9.77□□□□□ -0.85
CHD1-206ENST00000511067 ESYT1Q9BSJ8 1104 aa9.77□□□□□ -0.85
CHD1-206ENST00000511067 SCHIP1Q9P0W5 487 aaPredicted RBP9.77□□□□□ -0.85
CHD1-206ENST00000511067 ATAD2Q6PL18 1390 aa9.76□□□□□ -0.85
CHD1-206ENST00000511067 A6NJY4 79 aa9.76□□□□□ -0.85
CHD1-206ENST00000511067 IL2RAP01589 272 aa9.76□□□□□ -0.85
CHD1-206ENST00000511067 TIMP2P16035 220 aa9.76□□□□□ -0.85
CHD1-206ENST00000511067 SERPINB4P48594 390 aa9.76□□□□□ -0.85
CHD1-206ENST00000511067 WDR4P57081 412 aaKnown RBP9.76□□□□□ -0.85
CHD1-206ENST00000511067 SCG3Q8WXD2 468 aaKnown RBP9.76□□□□□ -0.85
CHD1-206ENST00000511067 RAB6BQ9NRW1 208 aa9.76□□□□□ -0.85
CHD1-206ENST00000511067 HRH3Q9Y5N1 445 aa9.76□□□□□ -0.85
CHD1-206ENST00000511067 PTGIRP43119 386 aa9.75□□□□□ -0.85
CHD1-206ENST00000511067 CBLBQ13191 982 aa9.75□□□□□ -0.85
CHD1-206ENST00000511067 KDF1Q8NAX2 398 aaPredicted RBP9.75□□□□□ -0.85
CHD1-206ENST00000511067 CNKSR1Q969H4 720 aa9.75□□□□□ -0.85
CHD1-206ENST00000511067 ZNF775Q96BV0 537 aaPredicted RBP9.75□□□□□ -0.85
CHD1-206ENST00000511067 TSPAN10Q9H1Z9 355 aaPredicted RBP9.75□□□□□ -0.85
CHD1-206ENST00000511067 GMPR2Q9P2T1 348 aaKnown RBP9.75□□□□□ -0.85
CHD1-206ENST00000511067 A0A1W2PRU2 124 aa9.74□□□□□ -0.85
CHD1-206ENST00000511067 C21orf2O43822 256 aa9.74□□□□□ -0.85
CHD1-206ENST00000511067 LGR5O75473 907 aa9.74□□□□□ -0.85
CHD1-206ENST00000511067 TLR1Q15399 786 aa9.74□□□□□ -0.85
CHD1-206ENST00000511067 NBPF15Q8N660 670 aa9.74□□□□□ -0.85
CHD1-206ENST00000511067 RGS22Q8NE09 1264 aa9.74□□□□□ -0.85
CHD1-206ENST00000511067 ZFAND3Q9H8U3 227 aa9.74□□□□□ -0.85
CHD1-206ENST00000511067 C11orf95C9JLR9 678 aaPredicted RBP9.73□□□□□ -0.85
CHD1-206ENST00000511067 CDK2AP1O14519 115 aa9.73□□□□□ -0.85
CHD1-206ENST00000511067 SCNN1AP37088 669 aa9.73□□□□□ -0.85
CHD1-206ENST00000511067 SLC9A9Q8IVB4 645 aa9.73□□□□□ -0.85
CHD1-206ENST00000511067 MEIOBQ8N635 442 aa9.73□□□□□ -0.85
CHD1-206ENST00000511067 ATP13A2Q9NQ11 1180 aa9.73□□□□□ -0.85
CHD1-206ENST00000511067 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.73□□□□□ -0.852e-6■■■■■ 149.1
CHD1-206ENST00000511067 PPP1R12BO60237 982 aaPredicted RBP9.72□□□□□ -0.85
CHD1-206ENST00000511067 PSMA6P60900 246 aaKnown RBP9.72□□□□□ -0.85
CHD1-206ENST00000511067 SF3B2Q13435 895 aaKnown RBP9.72□□□□□ -0.85
CHD1-206ENST00000511067 PURBQ96QR8 312 aaKnown RBP9.72□□□□□ -0.85
CHD1-206ENST00000511067 MKNK1Q9BUB5 465 aa9.72□□□□□ -0.85
CHD1-206ENST00000511067 POTEAQ6S8J7 498 aa9.71□□□□□ -0.86
CHD1-206ENST00000511067 GTF3C2Q8WUA4 911 aaPredicted RBP9.71□□□□□ -0.86
CHD1-206ENST00000511067 VTI1AQ96AJ9 217 aa9.71□□□□□ -0.86
CHD1-206ENST00000511067 NLRP3Q96P20 1036 aa9.71□□□□□ -0.86
CHD1-206ENST00000511067 FHDC1Q9C0D6 1143 aaPredicted RBP9.71□□□□□ -0.86
CHD1-206ENST00000511067 SEPT3Q9UH03 358 aa9.71□□□□□ -0.86
CHD1-206ENST00000511067 IQSEC3Q9UPP2 1182 aaPredicted RBP9.71□□□□□ -0.86
CHD1-206ENST00000511067 CHMP3Q9Y3E7 222 aa9.71□□□□□ -0.86
CHD1-206ENST00000511067 ICMTO60725 284 aa9.7□□□□□ -0.86
CHD1-206ENST00000511067 ABL1P00519 1130 aa9.7□□□□□ -0.86
CHD1-206ENST00000511067 C2orf49Q9BVC5 232 aaPredicted RBP9.7□□□□□ -0.86
CHD1-206ENST00000511067 GPC1P35052 558 aa9.69□□□□□ -0.86
CHD1-206ENST00000511067 HIRAP54198 1017 aaPredicted RBP9.69□□□□□ -0.86
CHD1-206ENST00000511067 RELBQ01201 579 aa9.69□□□□□ -0.86
CHD1-206ENST00000511067 CENPCQ03188 943 aa9.69□□□□□ -0.86
CHD1-206ENST00000511067 HELQQ8TDG4 1101 aa9.69□□□□□ -0.86
CHD1-206ENST00000511067 AGBL1Q96MI9 1066 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms