RNA–Protein interactions for RNA: ENST00000510638.1

NFKB1-209, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 628 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-209ENST00000510638 RGPD5Q99666 1765 aa11.31□□□□□ -0.6
NFKB1-209ENST00000510638 TNS2Q63HR2 1409 aa11.3□□□□□ -0.6
NFKB1-209ENST00000510638 SLC34A2O95436 690 aa11.3□□□□□ -0.6
NFKB1-209ENST00000510638 WDR63Q8IWG1 891 aa11.3□□□□□ -0.6
NFKB1-209ENST00000510638 DCAF5Q96JK2 942 aa11.3□□□□□ -0.6
NFKB1-209ENST00000510638 SYT17Q9BSW7 474 aa11.3□□□□□ -0.6
NFKB1-209ENST00000510638 CYP27B1O15528 508 aa11.29□□□□□ -0.6
NFKB1-209ENST00000510638 GOLGA2Q08379 1002 aa11.29□□□□□ -0.6
NFKB1-209ENST00000510638 TRIM35Q9UPQ4 493 aa11.29□□□□□ -0.6
NFKB1-209ENST00000510638 RNMTO43148 476 aaKnown RBP11.28□□□□□ -0.6
NFKB1-209ENST00000510638 HSPA6P17066 643 aa11.28□□□□□ -0.6
NFKB1-209ENST00000510638 TEFQ10587 303 aa11.28□□□□□ -0.6
NFKB1-209ENST00000510638 MPRIPQ6WCQ1 1025 aa11.28□□□□□ -0.6
NFKB1-209ENST00000510638 MCM10Q7L590 875 aa11.28□□□□□ -0.6
NFKB1-209ENST00000510638 FHDC1Q9C0D6 1143 aaPredicted RBP11.28□□□□□ -0.6
NFKB1-209ENST00000510638 MYH16Q9H6N6 1097 aa11.28□□□□□ -0.6
NFKB1-209ENST00000510638 IL16Q14005 1332 aa11.28□□□□□ -0.6
NFKB1-209ENST00000510638 E9PSI1 815 aa11.27□□□□□ -0.61
NFKB1-209ENST00000510638 PTGER2P43116 358 aa11.27□□□□□ -0.61
NFKB1-209ENST00000510638 CABP4P57796 275 aa11.27□□□□□ -0.61
NFKB1-209ENST00000510638 GNAI1P63096 354 aa11.27□□□□□ -0.61
NFKB1-209ENST00000510638 DCTN1Q14203 1278 aa11.27□□□□□ -0.61
NFKB1-209ENST00000510638 NKX1-1Q15270 411 aaPredicted RBP11.27□□□□□ -0.61
NFKB1-209ENST00000510638 PCDH10Q9P2E7 1040 aa11.27□□□□□ -0.61
NFKB1-209ENST00000510638 ZNF521Q96K83 1311 aa11.27□□□□□ -0.61
NFKB1-209ENST00000510638 COL24A1Q17RW2 1714 aa11.26□□□□□ -0.61
NFKB1-209ENST00000510638 ERVV-2B6SEH9 535 aa11.26□□□□□ -0.61
NFKB1-209ENST00000510638 IL17REQ8NFR9 667 aa11.26□□□□□ -0.61
NFKB1-209ENST00000510638 THUMPD2Q9BTF0 503 aaKnown RBP11.26□□□□□ -0.61
NFKB1-209ENST00000510638 IFT57Q9NWB7 429 aa11.26□□□□□ -0.61
NFKB1-209ENST00000510638 RGPD2P0DJD1 1756 aa11.26□□□□□ -0.61
NFKB1-209ENST00000510638 TAF7Q15545 349 aaPredicted RBP11.25□□□□□ -0.61
NFKB1-209ENST00000510638 MARCH10Q8NA82 808 aaPredicted RBP11.25□□□□□ -0.61
NFKB1-209ENST00000510638 CFAP44Q96MT7 982 aa11.25□□□□□ -0.61
NFKB1-209ENST00000510638 LGR6Q9HBX8 967 aa11.25□□□□□ -0.61
NFKB1-209ENST00000510638 BABAM1Q9NWV8 329 aa11.25□□□□□ -0.61
NFKB1-209ENST00000510638 LAS1LQ9Y4W2 734 aaKnown RBP11.25□□□□□ -0.61
NFKB1-209ENST00000510638 CEMIPQ8WUJ3 1361 aa11.25□□□□□ -0.61
NFKB1-209ENST00000510638 CENPBP07199 599 aaPredicted RBP11.24□□□□□ -0.61
NFKB1-209ENST00000510638 SLC52A2Q9HAB3 445 aa11.24□□□□□ -0.61
NFKB1-209ENST00000510638 TMOD3Q9NYL9 352 aa11.24□□□□□ -0.61
NFKB1-209ENST00000510638 QSER1Q2KHR3 1735 aa11.23□□□□□ -0.61
NFKB1-209ENST00000510638 PLSCR1O15162 318 aa11.23□□□□□ -0.61
NFKB1-209ENST00000510638 SYTL4Q96C24 671 aaPredicted RBP11.23□□□□□ -0.61
NFKB1-209ENST00000510638 TSPYL4Q9UJ04 414 aa11.23□□□□□ -0.61
NFKB1-209ENST00000510638 KDM6AO15550 1401 aaPredicted RBP11.23□□□□□ -0.61
NFKB1-209ENST00000510638 PKD1L3Q7Z443 1732 aa11.23□□□□□ -0.61
NFKB1-209ENST00000510638 BTBD11A6QL63 1104 aa11.22□□□□□ -0.61
NFKB1-209ENST00000510638 SLFN5Q08AF3 891 aa11.22□□□□□ -0.61
NFKB1-209ENST00000510638 TTC5Q8N0Z6 440 aa11.22□□□□□ -0.61
NFKB1-209ENST00000510638 NFATC2IPQ8NCF5 419 aa11.22□□□□□ -0.61
NFKB1-209ENST00000510638 WNK3Q9BYP7 1800 aa11.21□□□□□ -0.61
NFKB1-209ENST00000510638 LRRC37A3O60309 1634 aa11.21□□□□□ -0.61
NFKB1-209ENST00000510638 CHL1O00533 1208 aa11.21□□□□□ -0.61
NFKB1-209ENST00000510638 ZBTB7AO95365 584 aa11.21□□□□□ -0.61
NFKB1-209ENST00000510638 PRELPP51888 382 aa11.21□□□□□ -0.61
NFKB1-209ENST00000510638 GPR162Q16538 588 aa11.21□□□□□ -0.61
NFKB1-209ENST00000510638 CDCA7LQ96GN5 454 aa11.21□□□□□ -0.61
NFKB1-209ENST00000510638 MTFR1LQ9H019 292 aa11.21□□□□□ -0.61
NFKB1-209ENST00000510638 GOLGB1Q14789 3259 aaKnown RBP11.2□□□□□ -0.62
NFKB1-209ENST00000510638 BCL9O00512 1426 aa11.2□□□□□ -0.62
NFKB1-209ENST00000510638 FANCIQ9NVI1 1328 aa11.2□□□□□ -0.62
NFKB1-209ENST00000510638 ZNF853P0CG23 659 aa11.2□□□□□ -0.62
NFKB1-209ENST00000510638 PRIM1P49642 420 aaKnown RBP11.2□□□□□ -0.62
NFKB1-209ENST00000510638 PPP4R3CPQ6ZMV5 832 aa11.2□□□□□ -0.62
NFKB1-209ENST00000510638 ACSBG1Q96GR2 724 aa11.2□□□□□ -0.62
NFKB1-209ENST00000510638 SGIP1Q9BQI5 828 aa11.2□□□□□ -0.62
NFKB1-209ENST00000510638 MBIPQ9NS73 344 aa11.2□□□□□ -0.62
NFKB1-209ENST00000510638 WDR90Q96KV7 1748 aa11.2□□□□□ -0.62
NFKB1-209ENST00000510638 DUSP27Q5VZP5 1158 aa11.19□□□□□ -0.62
NFKB1-209ENST00000510638 TSR2Q969E8 191 aaKnown RBP11.19□□□□□ -0.62
NFKB1-209ENST00000510638 CHMP4AQ9BY43 222 aa11.19□□□□□ -0.62
NFKB1-209ENST00000510638 ANO8Q9HCE9 1232 aaPredicted RBP11.19□□□□□ -0.62
NFKB1-209ENST00000510638 SPINK5Q9NQ38 1064 aaPredicted RBP11.19□□□□□ -0.62
NFKB1-209ENST00000510638 MIS18AQ9NYP9 233 aa11.19□□□□□ -0.62
NFKB1-209ENST00000510638 CT47B1P0C2W7 299 aaPredicted RBP11.18□□□□□ -0.62
NFKB1-209ENST00000510638 ZNF790Q6PG37 636 aa11.18□□□□□ -0.62
NFKB1-209ENST00000510638 TRMT2AQ8IZ69 625 aaKnown RBP11.18□□□□□ -0.62
NFKB1-209ENST00000510638 SMARCC1Q92922 1105 aaPredicted RBP11.18□□□□□ -0.62
NFKB1-209ENST00000510638 ATF5Q9Y2D1 282 aaPredicted RBP11.18□□□□□ -0.62
NFKB1-209ENST00000510638 MRC1P22897 1456 aa11.18□□□□□ -0.62
NFKB1-209ENST00000510638 PIGBQ92521 554 aa11.17□□□□□ -0.62
NFKB1-209ENST00000510638 FMNL2Q96PY5 1086 aa11.17□□□□□ -0.62
NFKB1-209ENST00000510638 ARXQ96QS3 562 aa11.17□□□□□ -0.62
NFKB1-209ENST00000510638 ATP10DQ9P241 1426 aa11.17□□□□□ -0.62
NFKB1-209ENST00000510638 SOS1Q07889 1333 aaPredicted RBP11.16□□□□□ -0.62
NFKB1-209ENST00000510638 APLP1P51693 650 aa11.16□□□□□ -0.62
NFKB1-209ENST00000510638 EXOSC9Q06265 439 aaKnown RBP11.16□□□□□ -0.62
NFKB1-209ENST00000510638 SLC39A6Q13433 755 aa11.16□□□□□ -0.62
NFKB1-209ENST00000510638 BCL11BQ9C0K0 894 aaPredicted RBP11.16□□□□□ -0.62
NFKB1-209ENST00000510638 PDGFDQ9GZP0 370 aaPredicted RBP11.16□□□□□ -0.62
NFKB1-209ENST00000510638 HOXB7P09629 217 aa11.15□□□□□ -0.62
NFKB1-209ENST00000510638 EIF4A1P60842 406 aaKnown RBP11.15□□□□□ -0.62
NFKB1-209ENST00000510638 ZNF428Q96B54 188 aa11.15□□□□□ -0.62
NFKB1-209ENST00000510638 GPBP1L1Q9HC44 474 aaPredicted RBP11.15□□□□□ -0.62
NFKB1-209ENST00000510638 STK32BQ9NY57 414 aa11.15□□□□□ -0.62
NFKB1-209ENST00000510638 ADAMTS7Q9UKP4 1686 aa11.14□□□□□ -0.63
NFKB1-209ENST00000510638 KAT6BQ8WYB5 2073 aa11.14□□□□□ -0.63
NFKB1-209ENST00000510638 GRIN3BO60391 1043 aa11.14□□□□□ -0.63
NFKB1-209ENST00000510638 PTCD1O75127 700 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms