RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 XPCQ01831 940 aaPredicted RBP20.57■□□□□ 0.88
CLMAT3-201ENST00000510576 PROSER2Q86WR7 435 aaPredicted RBP20.57■□□□□ 0.88
CLMAT3-201ENST00000510576 GNAI3P08754 354 aa20.56■□□□□ 0.88
CLMAT3-201ENST00000510576 ARHGEF25Q86VW2 580 aa20.56■□□□□ 0.88
CLMAT3-201ENST00000510576 C16orf71Q8IYS4 520 aaPredicted RBP20.56■□□□□ 0.88
CLMAT3-201ENST00000510576 CAMTA1Q9Y6Y1 1673 aa20.56■□□□□ 0.88
CLMAT3-201ENST00000510576 HDGFL1Q5TGJ6 251 aa20.55■□□□□ 0.88
CLMAT3-201ENST00000510576 LRRC59Q96AG4 307 aaKnown RBP20.55■□□□□ 0.88
CLMAT3-201ENST00000510576 BCL11AQ9H165 835 aa20.55■□□□□ 0.88
CLMAT3-201ENST00000510576 NCAPD2Q15021 1401 aa20.55■□□□□ 0.88
CLMAT3-201ENST00000510576 APBB1O00213 710 aa20.55■□□□□ 0.88
CLMAT3-201ENST00000510576 SMARCA5O60264 1052 aaPredicted RBP20.55■□□□□ 0.88
CLMAT3-201ENST00000510576 GSE1Q14687 1217 aa20.55■□□□□ 0.88
CLMAT3-201ENST00000510576 PLEKHO1Q53GL0 409 aaPredicted RBP20.55■□□□□ 0.88
CLMAT3-201ENST00000510576 LMOD2Q6P5Q4 547 aa20.55■□□□□ 0.88
CLMAT3-201ENST00000510576 SNX21Q969T3 373 aa20.55■□□□□ 0.88
CLMAT3-201ENST00000510576 AKAP4Q5JQC9 854 aa20.54■□□□□ 0.88
CLMAT3-201ENST00000510576 ZNF530Q6P9A1 599 aaPredicted RBP20.54■□□□□ 0.88
CLMAT3-201ENST00000510576 C1orf167Q5SNV9 1468 aa20.54■□□□□ 0.88
CLMAT3-201ENST00000510576 SPRYD3Q8NCJ5 442 aa20.54■□□□□ 0.88
CLMAT3-201ENST00000510576 AMOTQ4VCS5 1084 aa20.53■□□□□ 0.88
CLMAT3-201ENST00000510576 KRT28Q7Z3Y7 464 aa20.53■□□□□ 0.88
CLMAT3-201ENST00000510576 OTUD7AQ8TE49 926 aaPredicted RBP20.53■□□□□ 0.88
CLMAT3-201ENST00000510576 LGR6Q9HBX8 967 aa20.53■□□□□ 0.88
CLMAT3-201ENST00000510576 CHMP4AQ9BY43 222 aa20.52■□□□□ 0.88
CLMAT3-201ENST00000510576 RGPD5Q99666 1765 aa20.52■□□□□ 0.88
CLMAT3-201ENST00000510576 PLEKHG5O94827 1062 aa20.52■□□□□ 0.87
CLMAT3-201ENST00000510576 HOXB7P09629 217 aa20.52■□□□□ 0.87
CLMAT3-201ENST00000510576 EIF4A1P60842 406 aaKnown RBP20.52■□□□□ 0.87
CLMAT3-201ENST00000510576 TEFQ10587 303 aa20.52■□□□□ 0.87
CLMAT3-201ENST00000510576 ANKRD24Q8TF21 1146 aa20.52■□□□□ 0.87
CLMAT3-201ENST00000510576 ALS2Q96Q42 1657 aa20.52■□□□□ 0.87
CLMAT3-201ENST00000510576 C19orf44Q9H6X5 657 aa20.5■□□□□ 0.87
CLMAT3-201ENST00000510576 CHMP5Q9NZZ3 219 aa20.5■□□□□ 0.87
CLMAT3-201ENST00000510576 OVOS2A0A0G2JMS6 1433 aa20.5■□□□□ 0.87
CLMAT3-201ENST00000510576 C1orf141Q5JVX7 400 aa20.5■□□□□ 0.87
CLMAT3-201ENST00000510576 KIF2CQ99661 725 aa20.5■□□□□ 0.87
CLMAT3-201ENST00000510576 MST1RQ04912 1400 aa20.49■□□□□ 0.87
CLMAT3-201ENST00000510576 NCOA3Q9Y6Q9 1424 aa20.49■□□□□ 0.87
CLMAT3-201ENST00000510576 PXDNQ92626 1479 aa20.49■□□□□ 0.87
CLMAT3-201ENST00000510576 CASC1Q6TDU7 716 aa20.49■□□□□ 0.87
CLMAT3-201ENST00000510576 SDSP20132 328 aa20.48■□□□□ 0.87
CLMAT3-201ENST00000510576 ATP8B2P98198 1209 aa20.48■□□□□ 0.87
CLMAT3-201ENST00000510576 BTBD11A6QL63 1104 aa20.48■□□□□ 0.87
CLMAT3-201ENST00000510576 EIF2S2P20042 333 aaKnown RBP20.48■□□□□ 0.87
CLMAT3-201ENST00000510576 PHAXQ9H814 394 aaKnown RBP20.48■□□□□ 0.87
CLMAT3-201ENST00000510576 HSP90AB1P08238 724 aaKnown RBP20.47■□□□□ 0.87
CLMAT3-201ENST00000510576 MPRIPQ6WCQ1 1025 aa20.47■□□□□ 0.87
CLMAT3-201ENST00000510576 SIPA1L3O60292 1781 aaPredicted RBP20.47■□□□□ 0.87
CLMAT3-201ENST00000510576 RNMTO43148 476 aaKnown RBP20.46■□□□□ 0.87
CLMAT3-201ENST00000510576 UBTFL1P0CB47 393 aaPredicted RBP20.46■□□□□ 0.87
CLMAT3-201ENST00000510576 OSBPL3Q9H4L5 887 aa20.46■□□□□ 0.87
CLMAT3-201ENST00000510576 EXOC6BQ9Y2D4 811 aa20.46■□□□□ 0.87
CLMAT3-201ENST00000510576 LRRFIP2Q9Y608 721 aaKnown RBP20.46■□□□□ 0.87
CLMAT3-201ENST00000510576 TUBGCP6Q96RT7 1819 aa20.46■□□□□ 0.87
CLMAT3-201ENST00000510576 LRRCC1Q9C099 1032 aa20.45■□□□□ 0.86
CLMAT3-201ENST00000510576 USP44Q9H0E7 712 aa20.45■□□□□ 0.86
CLMAT3-201ENST00000510576 PNMA6EA0A0J9YXQ4 647 aa20.45■□□□□ 0.86
CLMAT3-201ENST00000510576 KCNQ3O43525 872 aa20.45■□□□□ 0.86
CLMAT3-201ENST00000510576 PDE1AP54750 535 aa20.45■□□□□ 0.86
CLMAT3-201ENST00000510576 SRCIN1Q9C0H9 1055 aa20.45■□□□□ 0.86
CLMAT3-201ENST00000510576 CHPF2Q9P2E5 772 aa20.45■□□□□ 0.86
CLMAT3-201ENST00000510576 STRCP1A6NGW2 1772 aa20.44■□□□□ 0.86
CLMAT3-201ENST00000510576 ATF3P18847 181 aa20.44■□□□□ 0.86
CLMAT3-201ENST00000510576 AXIN2Q9Y2T1 843 aa20.44■□□□□ 0.86
CLMAT3-201ENST00000510576 IBTKQ9P2D0 1353 aaPredicted RBP20.44■□□□□ 0.86
CLMAT3-201ENST00000510576 ADAMTS7Q9UKP4 1686 aa20.43■□□□□ 0.86
CLMAT3-201ENST00000510576 DCCP43146 1447 aa20.42■□□□□ 0.86
CLMAT3-201ENST00000510576 K7ELQ4 463 aaPredicted RBP20.41■□□□□ 0.86
CLMAT3-201ENST00000510576 USP26Q9BXU7 913 aa20.41■□□□□ 0.86
CLMAT3-201ENST00000510576 ZNF335Q9H4Z2 1342 aaPredicted RBP20.41■□□□□ 0.86
CLMAT3-201ENST00000510576 TMEM94Q12767 1356 aa20.41■□□□□ 0.86
CLMAT3-201ENST00000510576 ERBB3P21860 1342 aa20.41■□□□□ 0.86
CLMAT3-201ENST00000510576 SALL3Q9BXA9 1300 aa20.41■□□□□ 0.86
CLMAT3-201ENST00000510576 DNAAF4Q8WXU2 420 aa20.41■□□□□ 0.86
CLMAT3-201ENST00000510576 DDIT3P35638 169 aa20.4■□□□□ 0.86
CLMAT3-201ENST00000510576 ZC3H6P61129 1189 aaKnown RBP20.4■□□□□ 0.86
CLMAT3-201ENST00000510576 RABEP1Q15276 862 aa20.4■□□□□ 0.86
CLMAT3-201ENST00000510576 RBM42Q9BTD8 480 aaKnown RBP20.4■□□□□ 0.86
CLMAT3-201ENST00000510576 REC8O95072 547 aa20.39■□□□□ 0.86
CLMAT3-201ENST00000510576 MCM4P33991 863 aa20.39■□□□□ 0.86
CLMAT3-201ENST00000510576 DBF4Q9UBU7 674 aaPredicted RBP20.39■□□□□ 0.86
CLMAT3-201ENST00000510576 CIZ1Q9ULV3 898 aaPredicted RBP20.39■□□□□ 0.86
CLMAT3-201ENST00000510576 CRYBG1Q9Y4K1 1723 aa20.39■□□□□ 0.85
CLMAT3-201ENST00000510576 CD2BP2O95400 341 aaKnown RBP20.39■□□□□ 0.85
CLMAT3-201ENST00000510576 MX1P20591 662 aa20.39■□□□□ 0.85
CLMAT3-201ENST00000510576 SSH3Q8TE77 659 aa20.39■□□□□ 0.85
CLMAT3-201ENST00000510576 SCN11AQ9UI33 1791 aa20.39■□□□□ 0.85
CLMAT3-201ENST00000510576 PI4KAP2A4QPH2 592 aa20.38■□□□□ 0.85
CLMAT3-201ENST00000510576 HSP90AA1P07900 732 aaKnown RBP20.38■□□□□ 0.85
CLMAT3-201ENST00000510576 BEND3Q5T5X7 828 aa20.38■□□□□ 0.85
CLMAT3-201ENST00000510576 PI4KAP1Q8N8J0 262 aa20.38■□□□□ 0.85
CLMAT3-201ENST00000510576 COL18A1P39060 1754 aa20.38■□□□□ 0.85
CLMAT3-201ENST00000510576 ERC2O15083 957 aa20.37■□□□□ 0.85
CLMAT3-201ENST00000510576 ADCY9O60503 1353 aa20.37■□□□□ 0.85
CLMAT3-201ENST00000510576 HEG1Q9ULI3 1381 aa20.37■□□□□ 0.85
CLMAT3-201ENST00000510576 GIGYF1O75420 1035 aaPredicted RBP20.36■□□□□ 0.85
CLMAT3-201ENST00000510576 ANXA1P04083 346 aa20.36■□□□□ 0.85
CLMAT3-201ENST00000510576 POLA2Q14181 598 aa20.36■□□□□ 0.85
CLMAT3-201ENST00000510576 RAPGEF4Q8WZA2 1011 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms