RNA–Protein interactions for RNA: ENST00000510362.5

RETREG1-206, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best)

Gene RETREG1, Length 1,054 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-206ENST00000510362 C14orf37Q86TY3 774 aa13.15□□□□□ -0.3
RETREG1-206ENST00000510362 PCDHGC3Q9UN70 934 aa13.15□□□□□ -0.3
RETREG1-206ENST00000510362 PCDHB15Q9Y5E8 787 aa13.15□□□□□ -0.3
RETREG1-206ENST00000510362 KNDC1Q76NI1 1749 aa13.15□□□□□ -0.3
RETREG1-206ENST00000510362 FAM135BQ49AJ0 1406 aa13.14□□□□□ -0.31
RETREG1-206ENST00000510362 NALCNQ8IZF0 1738 aa13.14□□□□□ -0.31
RETREG1-206ENST00000510362 PUS10Q3MIT2 529 aaKnown RBP13.14□□□□□ -0.31
RETREG1-206ENST00000510362 TRIM26Q12899 539 aaPredicted RBP13.13□□□□□ -0.31
RETREG1-206ENST00000510362 MORN1Q5T089 497 aa13.13□□□□□ -0.31
RETREG1-206ENST00000510362 C19orf44Q9H6X5 657 aa13.13□□□□□ -0.31
RETREG1-206ENST00000510362 PTPN5P54829 565 aa13.12□□□□□ -0.31
RETREG1-206ENST00000510362 QPCTQ16769 361 aa13.12□□□□□ -0.31
RETREG1-206ENST00000510362 SPNS2Q8IVW8 549 aa13.12□□□□□ -0.31
RETREG1-206ENST00000510362 ADGRL3Q9HAR2 1447 aa13.12□□□□□ -0.31
RETREG1-206ENST00000510362 ATF3P18847 181 aa13.11□□□□□ -0.31
RETREG1-206ENST00000510362 HSPA1LP34931 641 aa13.11□□□□□ -0.31
RETREG1-206ENST00000510362 SLAIN2Q9P270 581 aa13.11□□□□□ -0.31
RETREG1-206ENST00000510362 ASXL1Q8IXJ9 1541 aa13.11□□□□□ -0.31
RETREG1-206ENST00000510362 TECPR2O15040 1411 aa13.11□□□□□ -0.31
RETREG1-206ENST00000510362 LILRB3O75022 631 aa13.1□□□□□ -0.31
RETREG1-206ENST00000510362 PCDHB3Q9Y5E6 796 aa13.1□□□□□ -0.31
RETREG1-206ENST00000510362 LRPPRCP42704 1394 aaKnown RBP13.09□□□□□ -0.31
RETREG1-206ENST00000510362 PHLPP1O60346 1717 aa13.09□□□□□ -0.31
RETREG1-206ENST00000510362 PPP2R2DQ66LE6 453 aa13.09□□□□□ -0.31
RETREG1-206ENST00000510362 SLC27A5Q9Y2P5 690 aa13.09□□□□□ -0.31
RETREG1-206ENST00000510362 ROBO2Q9HCK4 1378 aa13.08□□□□□ -0.31
RETREG1-206ENST00000510362 YTHDC2Q9H6S0 1430 aaKnown RBP13.08□□□□□ -0.32
RETREG1-206ENST00000510362 PRPF38BQ5VTL8 546 aaKnown RBP13.08□□□□□ -0.32
RETREG1-206ENST00000510362 NYAP1Q6ZVC0 841 aa13.08□□□□□ -0.32
RETREG1-206ENST00000510362 CABLES1Q8TDN4 633 aa13.08□□□□□ -0.32
RETREG1-206ENST00000510362 ABCC11Q96J66 1382 aa13.07□□□□□ -0.32
RETREG1-206ENST00000510362 CDC42BPGQ6DT37 1551 aa13.07□□□□□ -0.32
RETREG1-206ENST00000510362 DCAF11Q8TEB1 546 aa13.07□□□□□ -0.32
RETREG1-206ENST00000510362 ZBTB3Q9H5J0 574 aa13.07□□□□□ -0.32
RETREG1-206ENST00000510362 C14orf93Q9H972 538 aaKnown RBP13.07□□□□□ -0.32
RETREG1-206ENST00000510362 DHX57Q6P158 1386 aaKnown RBP13.07□□□□□ -0.32
RETREG1-206ENST00000510362 MST1RQ04912 1400 aa13.06□□□□□ -0.32
RETREG1-206ENST00000510362 KIAA1210Q9ULL0 1709 aa13.06□□□□□ -0.32
RETREG1-206ENST00000510362 RFC5P40937 340 aa13.06□□□□□ -0.32
RETREG1-206ENST00000510362 BLOC1S3Q6QNY0 202 aa13.06□□□□□ -0.32
RETREG1-206ENST00000510362 RNF166Q96A37 237 aaPredicted RBP13.06□□□□□ -0.32
RETREG1-206ENST00000510362 AHDC1Q5TGY3 1603 aaPredicted RBP13.06□□□□□ -0.32
RETREG1-206ENST00000510362 DLC1Q96QB1 1528 aa13.05□□□□□ -0.32
RETREG1-206ENST00000510362 NUTM2BA6NNL0 878 aaPredicted RBP13.05□□□□□ -0.32
RETREG1-206ENST00000510362 NUTM2EB1AL46 878 aaPredicted RBP13.05□□□□□ -0.32
RETREG1-206ENST00000510362 MTMR2Q13614 643 aa13.05□□□□□ -0.32
RETREG1-206ENST00000510362 RTL5Q5HYW3 569 aaPredicted RBP13.05□□□□□ -0.32
RETREG1-206ENST00000510362 NUTM2AQ8IVF1 878 aaPredicted RBP13.05□□□□□ -0.32
RETREG1-206ENST00000510362 ADGRB1O14514 1584 aa13.05□□□□□ -0.32
RETREG1-206ENST00000510362 CFAP70Q5T0N1 1121 aa13.04□□□□□ -0.32
RETREG1-206ENST00000510362 TMEM132EQ6IEE7 984 aa13.04□□□□□ -0.32
RETREG1-206ENST00000510362 SYMPKQ92797 1274 aaKnown RBP13.04□□□□□ -0.32
RETREG1-206ENST00000510362 MED1Q15648 1581 aaPredicted RBP13.03□□□□□ -0.32
RETREG1-206ENST00000510362 COL16A1Q07092 1604 aaPredicted RBP13.03□□□□□ -0.32
RETREG1-206ENST00000510362 NHSL1Q5SYE7 1610 aa13.03□□□□□ -0.32
RETREG1-206ENST00000510362 C6orf229H3BNL8 230 aa13.03□□□□□ -0.32
RETREG1-206ENST00000510362 SCUBE3Q8IX30 993 aa13.03□□□□□ -0.32
RETREG1-206ENST00000510362 SIRT1Q96EB6 747 aa13.03□□□□□ -0.32
RETREG1-206ENST00000510362 STK26Q9P289 416 aa13.03□□□□□ -0.32
RETREG1-206ENST00000510362 NR1I2O75469 434 aa13.02□□□□□ -0.33
RETREG1-206ENST00000510362 COPS2P61201 443 aa13.02□□□□□ -0.33
RETREG1-206ENST00000510362 Q3C1V9 767 aa13.01□□□□□ -0.33
RETREG1-206ENST00000510362 RNF19BQ6ZMZ0 732 aa13.01□□□□□ -0.33
RETREG1-206ENST00000510362 BRINP3Q76B58 766 aa13.01□□□□□ -0.33
RETREG1-206ENST00000510362 DISP3Q9P2K9 1392 aa13.01□□□□□ -0.33
RETREG1-206ENST00000510362 C1orf167Q5SNV9 1468 aa13.01□□□□□ -0.33
RETREG1-206ENST00000510362 FMN2Q9NZ56 1722 aa13.01□□□□□ -0.33
RETREG1-206ENST00000510362 ARHGEF28Q8N1W1 1705 aaKnown RBP12.99□□□□□ -0.33
RETREG1-206ENST00000510362 SHPRHQ149N8 1683 aa12.99□□□□□ -0.33
RETREG1-206ENST00000510362 ADGRB2O60241 1585 aa12.99□□□□□ -0.33
RETREG1-206ENST00000510362 SPDYE5A6NIY4 337 aa12.99□□□□□ -0.33
RETREG1-206ENST00000510362 SALL2Q9Y467 1007 aaPredicted RBP12.99□□□□□ -0.33
RETREG1-206ENST00000510362 JCADQ9P266 1359 aa12.98□□□□□ -0.33
RETREG1-206ENST00000510362 PLEKHH1Q9ULM0 1364 aa12.98□□□□□ -0.33
RETREG1-206ENST00000510362 BRICD5Q6PL45 260 aa12.98□□□□□ -0.33
RETREG1-206ENST00000510362 WAPLQ7Z5K2 1190 aa12.98□□□□□ -0.33
RETREG1-206ENST00000510362 THAP11Q96EK4 314 aa12.98□□□□□ -0.33
RETREG1-206ENST00000510362 MTRQ99707 1265 aa12.98□□□□□ -0.33
RETREG1-206ENST00000510362 TIMELESSQ9UNS1 1208 aa12.98□□□□□ -0.33
RETREG1-206ENST00000510362 KIF1AQ12756 1690 aa12.97□□□□□ -0.33
RETREG1-206ENST00000510362 CFAP99D6REC4 459 aa12.97□□□□□ -0.33
RETREG1-206ENST00000510362 TMEM259Q4ZIN3 620 aa12.97□□□□□ -0.33
RETREG1-206ENST00000510362 RETREG3Q86VR2 466 aa12.97□□□□□ -0.33
RETREG1-206ENST00000510362 HCSTQ9UBK5 93 aa12.97□□□□□ -0.33
RETREG1-206ENST00000510362 FMNL1O95466 1100 aaPredicted RBP12.96□□□□□ -0.33
RETREG1-206ENST00000510362 PRAM1Q96QH2 718 aa12.96□□□□□ -0.33
RETREG1-206ENST00000510362 POGKQ9P215 609 aa12.96□□□□□ -0.33
RETREG1-206ENST00000510362 TRPM1Q7Z4N2 1603 aa12.95□□□□□ -0.34
RETREG1-206ENST00000510362 FLIIQ13045 1269 aa12.95□□□□□ -0.34
RETREG1-206ENST00000510362 TJAP1Q5JTD0 557 aa12.95□□□□□ -0.34
RETREG1-206ENST00000510362 PRR7Q8TB68 274 aa12.95□□□□□ -0.34
RETREG1-206ENST00000510362 SIN3AQ96ST3 1273 aa12.95□□□□□ -0.34
RETREG1-206ENST00000510362 TRAK1Q9UPV9 953 aa12.95□□□□□ -0.34
RETREG1-206ENST00000510362 ZPR1O75312 459 aa12.94□□□□□ -0.34
RETREG1-206ENST00000510362 AP1G2O75843 785 aa12.94□□□□□ -0.34
RETREG1-206ENST00000510362 MMRN1Q13201 1228 aa12.94□□□□□ -0.34
RETREG1-206ENST00000510362 NEUROD1Q13562 356 aa12.94□□□□□ -0.34
RETREG1-206ENST00000510362 MCM6Q14566 821 aa12.94□□□□□ -0.34
RETREG1-206ENST00000510362 BANK1Q8NDB2 785 aa12.94□□□□□ -0.34
RETREG1-206ENST00000510362 L3MBTL2Q969R5 705 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms