RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 VIRMAQ69YN4 1812 aaKnown RBP15.6■□□□□ 0.09
SNF8-207ENST00000509995 RGS19P49795 217 aa15.6■□□□□ 0.09
SNF8-207ENST00000509995 DALRD3Q5D0E6 543 aaKnown RBP15.6■□□□□ 0.09
SNF8-207ENST00000509995 PIM2Q9P1W9 311 aa15.6■□□□□ 0.09
SNF8-207ENST00000509995 CNTNAP1P78357 1384 aa15.6■□□□□ 0.09
SNF8-207ENST00000509995 TNRC18O15417 2968 aaPredicted RBP15.6■□□□□ 0.09
SNF8-207ENST00000509995 GLTPD2A6NH11 291 aa15.59■□□□□ 0.09
SNF8-207ENST00000509995 PCDH11XQ9BZA7 1347 aa15.59■□□□□ 0.09
SNF8-207ENST00000509995 PCDH11YQ9BZA8 1340 aa15.59■□□□□ 0.09
SNF8-207ENST00000509995 LOC102724428A0A0B4J2F2 783 aa15.58■□□□□ 0.08
SNF8-207ENST00000509995 LBX1P52954 281 aa15.58■□□□□ 0.08
SNF8-207ENST00000509995 SIK1P57059 783 aa15.58■□□□□ 0.08
SNF8-207ENST00000509995 NLGN1Q8N2Q7 840 aa15.58■□□□□ 0.08
SNF8-207ENST00000509995 CCDC88AQ3V6T2 1871 aa15.58■□□□□ 0.08
SNF8-207ENST00000509995 RAB3GAP2Q9H2M9 1393 aa15.58■□□□□ 0.08
SNF8-207ENST00000509995 TMF1P82094 1093 aa15.57■□□□□ 0.08
SNF8-207ENST00000509995 EDC4Q6P2E9 1401 aaKnown RBP15.57■□□□□ 0.08
SNF8-207ENST00000509995 HOXC9P31274 260 aa15.56■□□□□ 0.08
SNF8-207ENST00000509995 RASSF7Q02833 373 aa15.55■□□□□ 0.08
SNF8-207ENST00000509995 ITPK1Q13572 414 aa15.55■□□□□ 0.08
SNF8-207ENST00000509995 RAPGEF4Q8WZA2 1011 aa15.55■□□□□ 0.08
SNF8-207ENST00000509995 PARP3Q9Y6F1 533 aa15.55■□□□□ 0.08
SNF8-207ENST00000509995 MAP3K19Q56UN5 1328 aa15.54■□□□□ 0.08
SNF8-207ENST00000509995 CCDC85CA6NKD9 419 aa15.54■□□□□ 0.08
SNF8-207ENST00000509995 PIGBQ92521 554 aa15.54■□□□□ 0.08
SNF8-207ENST00000509995 WBP1LQ9NX94 342 aa15.54■□□□□ 0.08
SNF8-207ENST00000509995 POTECB2RU33 542 aa15.53■□□□□ 0.08
SNF8-207ENST00000509995 LMNB1P20700 586 aa15.53■□□□□ 0.08
SNF8-207ENST00000509995 NBPF6Q5VWK0 638 aa15.53■□□□□ 0.08
SNF8-207ENST00000509995 USHBP1Q8N6Y0 703 aa15.53■□□□□ 0.08
SNF8-207ENST00000509995 NBPF4Q96M43 638 aa15.53■□□□□ 0.08
SNF8-207ENST00000509995 CYP27B1O15528 508 aa15.52■□□□□ 0.08
SNF8-207ENST00000509995 HSPA8P11142 646 aaKnown RBP15.52■□□□□ 0.08
SNF8-207ENST00000509995 GYS1P13807 737 aa15.52■□□□□ 0.08
SNF8-207ENST00000509995 TATP17735 454 aaPredicted RBP15.52■□□□□ 0.08
SNF8-207ENST00000509995 TRAPPC3LQ5T215 181 aa15.52■□□□□ 0.08
SNF8-207ENST00000509995 COL5A3P25940 1745 aaPredicted RBP15.51■□□□□ 0.07
SNF8-207ENST00000509995 RTL1A6NKG5 1358 aa15.51■□□□□ 0.07
SNF8-207ENST00000509995 ATP6V1AP38606 617 aa15.51■□□□□ 0.07
SNF8-207ENST00000509995 AMPHP49418 695 aa15.51■□□□□ 0.07
SNF8-207ENST00000509995 VEGFBP49765 207 aa15.51■□□□□ 0.07
SNF8-207ENST00000509995 RTCBQ9Y3I0 505 aaKnown RBP15.51■□□□□ 0.07
SNF8-207ENST00000509995 CHRNA5P30532 468 aa15.5■□□□□ 0.07
SNF8-207ENST00000509995 CHADLQ6NUI6 762 aa15.5■□□□□ 0.07
SNF8-207ENST00000509995 DLEC1Q9Y238 1755 aa15.49■□□□□ 0.07
SNF8-207ENST00000509995 ZNF831Q5JPB2 1677 aa15.49■□□□□ 0.07
SNF8-207ENST00000509995 ADRA2BP18089 450 aa15.49■□□□□ 0.07
SNF8-207ENST00000509995 HDGFL2Q7Z4V5 671 aaPredicted RBP15.49■□□□□ 0.07
SNF8-207ENST00000509995 SMG6Q86US8 1419 aaKnown RBP15.49■□□□□ 0.07
SNF8-207ENST00000509995 ARHGEF1Q92888 912 aaKnown RBP15.48■□□□□ 0.07
SNF8-207ENST00000509995 DICER1Q9UPY3 1922 aaKnown RBP15.48■□□□□ 0.07
SNF8-207ENST00000509995 A0A1W2PP64 1363 aa15.48■□□□□ 0.07
SNF8-207ENST00000509995 KDRP35968 1356 aa15.48■□□□□ 0.07
SNF8-207ENST00000509995 PASKQ96RG2 1323 aa15.47■□□□□ 0.07
SNF8-207ENST00000509995 ASAP1Q9ULH1 1129 aa15.47■□□□□ 0.07
SNF8-207ENST00000509995 MYH14Q7Z406 1995 aaKnown RBP15.46■□□□□ 0.07
SNF8-207ENST00000509995 POTEIP0CG38 1075 aa15.46■□□□□ 0.07
SNF8-207ENST00000509995 POTEJP0CG39 1038 aa15.46■□□□□ 0.07
SNF8-207ENST00000509995 RFC4P35249 363 aa15.46■□□□□ 0.07
SNF8-207ENST00000509995 FBLN1P23142 703 aa15.45■□□□□ 0.06
SNF8-207ENST00000509995 DPY19L2Q6NUT2 758 aa15.45■□□□□ 0.06
SNF8-207ENST00000509995 TMC1Q8TDI8 760 aa15.45■□□□□ 0.06
SNF8-207ENST00000509995 TMOD3Q9NYL9 352 aa15.45■□□□□ 0.06
SNF8-207ENST00000509995 DDR1Q08345 913 aa15.44■□□□□ 0.06
SNF8-207ENST00000509995 NKX1-1Q15270 411 aaPredicted RBP15.44■□□□□ 0.06
SNF8-207ENST00000509995 THSD7BQ9C0I4 1608 aa15.43■□□□□ 0.06
SNF8-207ENST00000509995 MAP2K1Q02750 393 aaPredicted RBP15.43■□□□□ 0.06
SNF8-207ENST00000509995 COG3Q96JB2 828 aa15.43■□□□□ 0.06
SNF8-207ENST00000509995 SLC12A5Q9H2X9 1139 aa15.43■□□□□ 0.06
SNF8-207ENST00000509995 TERF2IPQ9NYB0 399 aa15.43■□□□□ 0.06
SNF8-207ENST00000509995 CNTNAP4Q9C0A0 1308 aa15.43■□□□□ 0.06
SNF8-207ENST00000509995 TMEM88BA6NKF7 163 aa15.42■□□□□ 0.06
SNF8-207ENST00000509995 RC3H1Q5TC82 1133 aaKnown RBP15.42■□□□□ 0.06
SNF8-207ENST00000509995 AFDNP55196 1824 aaKnown RBP15.41■□□□□ 0.06
SNF8-207ENST00000509995 NFKBIEO00221 500 aa15.41■□□□□ 0.06
SNF8-207ENST00000509995 RPS6KA4O75676 772 aa15.41■□□□□ 0.06
SNF8-207ENST00000509995 RRS1Q15050 365 aaKnown RBP15.41■□□□□ 0.06
SNF8-207ENST00000509995 CFAP44Q96MT7 982 aa15.41■□□□□ 0.06
SNF8-207ENST00000509995 ATG3Q9NT62 314 aa15.41■□□□□ 0.06
SNF8-207ENST00000509995 RASSF10A6NK89 507 aa15.4■□□□□ 0.06
SNF8-207ENST00000509995 FKBP8Q14318 412 aa15.4■□□□□ 0.06
SNF8-207ENST00000509995 SLC4A9Q96Q91 983 aa15.4■□□□□ 0.06
SNF8-207ENST00000509995 SCN4AP35499 1836 aa15.4■□□□□ 0.06
SNF8-207ENST00000509995 FER1L6Q2WGJ9 1857 aa15.4■□□□□ 0.06
SNF8-207ENST00000509995 ROCK2O75116 1388 aaKnown RBP15.39■□□□□ 0.05
SNF8-207ENST00000509995 USP42Q9H9J4 1324 aaKnown RBP15.39■□□□□ 0.05
SNF8-207ENST00000509995 INSRP06213 1382 aa15.38■□□□□ 0.05
SNF8-207ENST00000509995 NRXN2Q9P2S2 1712 aa15.38■□□□□ 0.05
SNF8-207ENST00000509995 POLRMTO00411 1230 aaKnown RBP15.38■□□□□ 0.05
SNF8-207ENST00000509995 LDHDQ86WU2 507 aa15.38■□□□□ 0.05
SNF8-207ENST00000509995 SRP68Q9UHB9 627 aaKnown RBP15.38■□□□□ 0.05
SNF8-207ENST00000509995 ADAMTS7Q9UKP4 1686 aa15.38■□□□□ 0.05
SNF8-207ENST00000509995 NCAPD2Q15021 1401 aa15.37■□□□□ 0.05
SNF8-207ENST00000509995 ERFEQ4G0M1 354 aa15.37■□□□□ 0.05
SNF8-207ENST00000509995 WDR33Q9C0J8 1336 aaKnown RBP15.37■□□□□ 0.05
SNF8-207ENST00000509995 ITGBL1O95965 494 aaPredicted RBP15.36■□□□□ 0.05
SNF8-207ENST00000509995 DEFB115Q30KQ5 88 aa15.36■□□□□ 0.05
SNF8-207ENST00000509995 TTLL6Q8N841 843 aa15.36■□□□□ 0.05
SNF8-207ENST00000509995 SPG7Q9UQ90 795 aa15.36■□□□□ 0.05
SNF8-207ENST00000509995 LTBP1Q14766 1721 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms