RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 DDX12PQ92771 950 aa9.49□□□□□ -0.89
CAST-228ENST00000509903 ZNF330Q9Y3S2 320 aaPredicted RBP9.49□□□□□ -0.89
CAST-228ENST00000509903 ALDH1L2Q3SY69 923 aa9.48□□□□□ -0.89
CAST-228ENST00000509903 UPF2Q9HAU5 1272 aaKnown RBP9.48□□□□□ -0.89
CAST-228ENST00000509903 TRPC6Q9Y210 931 aa9.48□□□□□ -0.89
CAST-228ENST00000509903 ITSN1Q15811 1721 aa9.48□□□□□ -0.89
CAST-228ENST00000509903 MON2Q7Z3U7 1717 aa9.48□□□□□ -0.89
CAST-228ENST00000509903 IL13P35225 146 aa9.48□□□□□ -0.89
CAST-228ENST00000509903 HIC1Q14526 733 aa9.48□□□□□ -0.89
CAST-228ENST00000509903 PHACTR3Q96KR7 559 aa9.48□□□□□ -0.89
CAST-228ENST00000509903 ZRANB1Q9UGI0 708 aa9.48□□□□□ -0.89
CAST-228ENST00000509903 LMOD3Q0VAK6 560 aa9.47□□□□□ -0.89
CAST-228ENST00000509903 RRS1Q15050 365 aaKnown RBP9.47□□□□□ -0.89
CAST-228ENST00000509903 TMEM57Q8N5G2 664 aa9.47□□□□□ -0.89
CAST-228ENST00000509903 UBR1Q8IWV7 1749 aa9.47□□□□□ -0.89
CAST-228ENST00000509903 GNAI1P63096 354 aa9.47□□□□□ -0.89
CAST-228ENST00000509903 HDAC1Q13547 482 aaPredicted RBP9.47□□□□□ -0.89
CAST-228ENST00000509903 ROBO2Q9HCK4 1378 aa9.46□□□□□ -0.89
CAST-228ENST00000509903 AKAP12Q02952 1782 aa9.46□□□□□ -0.89
CAST-228ENST00000509903 POM121CA8CG34 1229 aa9.46□□□□□ -0.89
CAST-228ENST00000509903 THUMPD2Q9BTF0 503 aaKnown RBP9.46□□□□□ -0.89
CAST-228ENST00000509903 IFT57Q9NWB7 429 aa9.46□□□□□ -0.89
CAST-228ENST00000509903 SEC24BO95487 1268 aa9.46□□□□□ -0.9
CAST-228ENST00000509903 USP19O94966 1318 aa9.45□□□□□ -0.9
CAST-228ENST00000509903 PRR36Q9H6K5 1346 aa9.45□□□□□ -0.9
CAST-228ENST00000509903 ADAMTS13Q76LX8 1427 aa9.45□□□□□ -0.9
CAST-228ENST00000509903 C3P01024 1663 aa9.45□□□□□ -0.9
CAST-228ENST00000509903 MDM2Q00987 491 aaPredicted RBP9.45□□□□□ -0.9
CAST-228ENST00000509903 BECN1Q14457 450 aa9.45□□□□□ -0.9
CAST-228ENST00000509903 PLEKHG1Q9ULL1 1385 aa9.45□□□□□ -0.9
CAST-228ENST00000509903 SKIV2LQ15477 1246 aaKnown RBP9.44□□□□□ -0.9
CAST-228ENST00000509903 DPY19L2Q6NUT2 758 aa9.44□□□□□ -0.9
CAST-228ENST00000509903 TMUB1Q9BVT8 246 aa9.44□□□□□ -0.9
CAST-228ENST00000509903 BCL11AQ9H165 835 aa9.44□□□□□ -0.9
CAST-228ENST00000509903 ZBTB40Q9NUA8 1239 aa9.44□□□□□ -0.9
CAST-228ENST00000509903 PTGDRQ13258 359 aa9.44□□□□□ -0.9
CAST-228ENST00000509903 CHMP4BQ9H444 224 aaKnown RBP9.44□□□□□ -0.9
CAST-228ENST00000509903 GDPD2Q9HCC8 539 aa9.44□□□□□ -0.9
CAST-228ENST00000509903 EID1Q9Y6B2 187 aa9.44□□□□□ -0.9
CAST-228ENST00000509903 VAMP4O75379 141 aa9.43□□□□□ -0.9
CAST-228ENST00000509903 NFKBIBQ15653 356 aa9.43□□□□□ -0.9
CAST-228ENST00000509903 MBIPQ9NS73 344 aa9.43□□□□□ -0.9
CAST-228ENST00000509903 TTC21BQ7Z4L5 1316 aa9.43□□□□□ -0.9
CAST-228ENST00000509903 ELL2O00472 640 aaPredicted RBP9.43□□□□□ -0.9
CAST-228ENST00000509903 LTKP29376 864 aa9.43□□□□□ -0.9
CAST-228ENST00000509903 SMC5Q8IY18 1101 aa9.43□□□□□ -0.9
CAST-228ENST00000509903 BEGAINQ9BUH8 593 aa9.43□□□□□ -0.9
CAST-228ENST00000509903 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.43□□□□□ -0.9
CAST-228ENST00000509903 ACEP12821 1306 aa9.43□□□□□ -0.9
CAST-228ENST00000509903 ZNF853P0CG23 659 aa9.42□□□□□ -0.9
CAST-228ENST00000509903 TWISTNBQ3B726 338 aaPredicted RBP9.42□□□□□ -0.9
CAST-228ENST00000509903 MRPL50Q8N5N7 158 aaKnown RBP9.42□□□□□ -0.9
CAST-228ENST00000509903 TSPYL6Q8N831 410 aa9.42□□□□□ -0.9
CAST-228ENST00000509903 ARHGAP45Q92619 1136 aa9.42□□□□□ -0.9
CAST-228ENST00000509903 SLC26A8Q96RN1 970 aa9.42□□□□□ -0.9
CAST-228ENST00000509903 DLG5Q8TDM6 1919 aa9.42□□□□□ -0.9
CAST-228ENST00000509903 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.42□□□□□ -0.9
CAST-228ENST00000509903 CEBPAP49715 358 aaPredicted RBP9.41□□□□□ -0.9
CAST-228ENST00000509903 UPF1Q92900 1129 aaKnown RBP eCLIP9.41□□□□□ -0.9
CAST-228ENST00000509903 TBC1D32Q96NH3 1257 aa9.41□□□□□ -0.9
CAST-228ENST00000509903 NRKQ7Z2Y5 1582 aa9.41□□□□□ -0.9
CAST-228ENST00000509903 USP6P35125 1406 aa9.41□□□□□ -0.9
CAST-228ENST00000509903 PTCH1Q13635 1447 aa9.41□□□□□ -0.9
CAST-228ENST00000509903 SSTR3P32745 418 aaPredicted RBP9.41□□□□□ -0.9
CAST-228ENST00000509903 EIF4A2Q14240 407 aaKnown RBP9.41□□□□□ -0.9
CAST-228ENST00000509903 SULT6B1Q6IMI4 303 aa9.41□□□□□ -0.9
CAST-228ENST00000509903 TOPAZ1Q8N9V7 1692 aa9.41□□□□□ -0.9
CAST-228ENST00000509903 OVOS2A0A0J9YW53 1432 aa9.4□□□□□ -0.9
CAST-228ENST00000509903 OVOS2Q6IE36 1432 aa9.4□□□□□ -0.9
CAST-228ENST00000509903 FAM83GA6ND36 823 aa9.4□□□□□ -0.9
CAST-228ENST00000509903 SOCS7O14512 581 aa9.4□□□□□ -0.91
CAST-228ENST00000509903 DCTN1Q14203 1278 aa9.4□□□□□ -0.91
CAST-228ENST00000509903 API5Q9BZZ5 524 aaKnown RBP9.4□□□□□ -0.91
CAST-228ENST00000509903 PIK3R4Q99570 1358 aa9.39□□□□□ -0.91
CAST-228ENST00000509903 NUCB1Q02818 461 aa9.39□□□□□ -0.91
CAST-228ENST00000509903 PLPP6Q8IY26 295 aa9.39□□□□□ -0.91
CAST-228ENST00000509903 C8orf58Q8NAV2 365 aa9.39□□□□□ -0.91
CAST-228ENST00000509903 TMEM106CQ9BVX2 250 aa9.39□□□□□ -0.91
CAST-228ENST00000509903 CDHR5Q9HBB8 845 aa9.39□□□□□ -0.91
CAST-228ENST00000509903 AMOTL2Q9Y2J4 779 aa9.39□□□□□ -0.91
CAST-228ENST00000509903 PTPRUQ92729 1446 aa9.39□□□□□ -0.91
CAST-228ENST00000509903 ABCC4O15439 1325 aa9.39□□□□□ -0.91
CAST-228ENST00000509903 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.39□□□□□ -0.91
CAST-228ENST00000509903 SPDYE5A6NIY4 337 aa9.39□□□□□ -0.91
CAST-228ENST00000509903 ZBTB7BO15156 539 aaPredicted RBP9.39□□□□□ -0.91
CAST-228ENST00000509903 FOXK1P85037 733 aa9.39□□□□□ -0.91
CAST-228ENST00000509903 LNPKQ9C0E8 428 aa9.39□□□□□ -0.91
CAST-228ENST00000509903 RFX1P22670 979 aa9.38□□□□□ -0.91
CAST-228ENST00000509903 HSP90AB2PQ58FF8 381 aa9.38□□□□□ -0.91
CAST-228ENST00000509903 MYSM1Q5VVJ2 828 aa9.38□□□□□ -0.91
CAST-228ENST00000509903 CHD1LQ86WJ1 897 aa9.38□□□□□ -0.91
CAST-228ENST00000509903 GCC1Q96CN9 775 aa9.38□□□□□ -0.91
CAST-228ENST00000509903 TTC21AQ8NDW8 1320 aa9.38□□□□□ -0.91
CAST-228ENST00000509903 MTMR14Q8NCE2 650 aa9.37□□□□□ -0.91
CAST-228ENST00000509903 NGDNQ8NEJ9 315 aaKnown RBP9.37□□□□□ -0.91
CAST-228ENST00000509903 GLMNQ92990 594 aa9.37□□□□□ -0.91
CAST-228ENST00000509903 CALR3Q96L12 384 aaKnown RBP9.37□□□□□ -0.91
CAST-228ENST00000509903 C22orf23Q9BZE7 217 aa9.37□□□□□ -0.91
CAST-228ENST00000509903 SLKQ9H2G2 1235 aaPredicted RBP9.37□□□□□ -0.91
CAST-228ENST00000509903 TBX22Q9Y458 520 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms