RNA–Protein interactions for RNA: ENST00000509618.1

HTT-206, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-206ENST00000509618 TNRC18O15417 2968 aaPredicted RBP7.09□□□□□ -1.27
HTT-206ENST00000509618 ARFGEF1Q9Y6D6 1849 aa7.08□□□□□ -1.28
HTT-206ENST00000509618 KDM2BQ8NHM5 1336 aa7.08□□□□□ -1.28
HTT-206ENST00000509618 HSPA8P11142 646 aaKnown RBP7.08□□□□□ -1.28
HTT-206ENST00000509618 SSFA2P28290 1259 aa7.08□□□□□ -1.28
HTT-206ENST00000509618 HOXC9P31274 260 aa7.08□□□□□ -1.28
HTT-206ENST00000509618 DDR1Q08345 913 aa7.08□□□□□ -1.28
HTT-206ENST00000509618 FLAD1Q8NFF5 587 aa7.08□□□□□ -1.28
HTT-206ENST00000509618 KDRP35968 1356 aa7.08□□□□□ -1.28
HTT-206ENST00000509618 CNTNAP1P78357 1384 aa7.08□□□□□ -1.28
HTT-206ENST00000509618 TIAM2Q8IVF5 1701 aa7.07□□□□□ -1.28
HTT-206ENST00000509618 SBF1O95248 1867 aa7.07□□□□□ -1.28
HTT-206ENST00000509618 ITGB4P16144 1822 aa7.07□□□□□ -1.28
HTT-206ENST00000509618 LOC102724428A0A0B4J2F2 783 aa7.07□□□□□ -1.28
HTT-206ENST00000509618 GYS1P13807 737 aa7.07□□□□□ -1.28
HTT-206ENST00000509618 SIK1P57059 783 aa7.07□□□□□ -1.28
HTT-206ENST00000509618 TGFB2P61812 414 aa7.07□□□□□ -1.28
HTT-206ENST00000509618 PRDM10Q9NQV6 1147 aa7.07□□□□□ -1.28
HTT-206ENST00000509618 ASAP1Q9ULH1 1129 aa7.07□□□□□ -1.28
HTT-206ENST00000509618 A0A1W2PP64 1363 aa7.07□□□□□ -1.28
HTT-206ENST00000509618 EVC2Q86UK5 1308 aa7.06□□□□□ -1.28
HTT-206ENST00000509618 VEGFBP49765 207 aa7.06□□□□□ -1.28
HTT-206ENST00000509618 SRP68Q9UHB9 627 aaKnown RBP7.06□□□□□ -1.28
HTT-206ENST00000509618 PDE4DIPQ5VU43 2346 aa7.05□□□□□ -1.28
HTT-206ENST00000509618 NFKBIEO00221 500 aa7.05□□□□□ -1.28
HTT-206ENST00000509618 MLLT1Q03111 559 aaPredicted RBP7.05□□□□□ -1.28
HTT-206ENST00000509618 RRS1Q15050 365 aaKnown RBP7.05□□□□□ -1.28
HTT-206ENST00000509618 ZNF692Q9BU19 519 aaPredicted RBP7.05□□□□□ -1.28
HTT-206ENST00000509618 SLC12A5Q9H2X9 1139 aa7.05□□□□□ -1.28
HTT-206ENST00000509618 CREBZFQ9NS37 354 aa7.05□□□□□ -1.28
HTT-206ENST00000509618 WBP1LQ9NX94 342 aa7.05□□□□□ -1.28
HTT-206ENST00000509618 EDC4Q6P2E9 1401 aaKnown RBP7.04□□□□□ -1.28
HTT-206ENST00000509618 GLTPD2A6NH11 291 aa7.04□□□□□ -1.28
HTT-206ENST00000509618 CCDC85CA6NKD9 419 aa7.04□□□□□ -1.28
HTT-206ENST00000509618 CTCFP49711 727 aaPredicted RBP7.04□□□□□ -1.28
HTT-206ENST00000509618 RGS19P49795 217 aa7.04□□□□□ -1.28
HTT-206ENST00000509618 DALRD3Q5D0E6 543 aaKnown RBP7.04□□□□□ -1.28
HTT-206ENST00000509618 ARHGEF1Q92888 912 aaKnown RBP7.04□□□□□ -1.28
HTT-206ENST00000509618 TSKSQ9UJT2 592 aa7.04□□□□□ -1.28
HTT-206ENST00000509618 CARMIL3Q8ND23 1372 aa7.04□□□□□ -1.28
HTT-206ENST00000509618 PASKQ96RG2 1323 aa7.03□□□□□ -1.28
HTT-206ENST00000509618 ADAMTS7Q9UKP4 1686 aa7.03□□□□□ -1.28
HTT-206ENST00000509618 VEGFAP15692 232 aaPredicted RBP7.03□□□□□ -1.28
HTT-206ENST00000509618 TMF1P82094 1093 aa7.03□□□□□ -1.28
HTT-206ENST00000509618 FKBP8Q14318 412 aa7.03□□□□□ -1.28
HTT-206ENST00000509618 ATG3Q9NT62 314 aa7.03□□□□□ -1.28
HTT-206ENST00000509618 CCDC87Q9NVE4 849 aa7.03□□□□□ -1.28
HTT-206ENST00000509618 PIM2Q9P1W9 311 aa7.03□□□□□ -1.28
HTT-206ENST00000509618 VIRMAQ69YN4 1812 aaKnown RBP7.03□□□□□ -1.28
HTT-206ENST00000509618 PCDH11XQ9BZA7 1347 aa7.02□□□□□ -1.28
HTT-206ENST00000509618 PCDH11YQ9BZA8 1340 aa7.02□□□□□ -1.28
HTT-206ENST00000509618 COL5A3P25940 1745 aaPredicted RBP7.02□□□□□ -1.29
HTT-206ENST00000509618 LTBP1Q14766 1721 aa7.02□□□□□ -1.29
HTT-206ENST00000509618 ATP6V1AP38606 617 aa7.02□□□□□ -1.29
HTT-206ENST00000509618 FMR1Q06787 632 aaKnown RBP eCLIP7.02□□□□□ -1.292e-6■■□□□ 12.9
HTT-206ENST00000509618 STAC3Q96MF2 364 aa7.02□□□□□ -1.29
HTT-206ENST00000509618 MYH14Q7Z406 1995 aaKnown RBP7.02□□□□□ -1.29
HTT-206ENST00000509618 AMPHP49418 695 aa7.01□□□□□ -1.29
HTT-206ENST00000509618 HSP90AB2PQ58FF8 381 aa7.01□□□□□ -1.29
HTT-206ENST00000509618 CHADLQ6NUI6 762 aa7.01□□□□□ -1.29
HTT-206ENST00000509618 SMARCC1Q92922 1105 aaPredicted RBP7.01□□□□□ -1.29
HTT-206ENST00000509618 THSD7BQ9C0I4 1608 aa7.01□□□□□ -1.29
HTT-206ENST00000509618 POLRMTO00411 1230 aaKnown RBP7□□□□□ -1.29
HTT-206ENST00000509618 TATP17735 454 aaPredicted RBP7□□□□□ -1.29
HTT-206ENST00000509618 LMNB1P20700 586 aa7□□□□□ -1.29
HTT-206ENST00000509618 TMC1Q8TDI8 760 aa7□□□□□ -1.29
HTT-206ENST00000509618 RAPGEF4Q8WZA2 1011 aa7□□□□□ -1.29
HTT-206ENST00000509618 AIDAQ96BJ3 306 aa7□□□□□ -1.29
HTT-206ENST00000509618 PARP3Q9Y6F1 533 aa7□□□□□ -1.29
HTT-206ENST00000509618 NCAPD2Q15021 1401 aa7□□□□□ -1.29
HTT-206ENST00000509618 RTL1A6NKG5 1358 aa6.99□□□□□ -1.29
HTT-206ENST00000509618 DDNO94850 711 aaPredicted RBP6.99□□□□□ -1.29
HTT-206ENST00000509618 ITGBL1O95965 494 aaPredicted RBP6.99□□□□□ -1.29
HTT-206ENST00000509618 TRIM26Q12899 539 aaPredicted RBP6.99□□□□□ -1.29
HTT-206ENST00000509618 NKX1-1Q15270 411 aaPredicted RBP6.99□□□□□ -1.29
HTT-206ENST00000509618 TRAPPC3LQ5T215 181 aa6.99□□□□□ -1.29
HTT-206ENST00000509618 NLGN1Q8N2Q7 840 aa6.99□□□□□ -1.29
HTT-206ENST00000509618 ZNF219Q9P2Y4 722 aaPredicted RBP6.99□□□□□ -1.29
HTT-206ENST00000509618 RTCBQ9Y3I0 505 aaKnown RBP6.99□□□□□ -1.29
HTT-206ENST00000509618 ADAMTSL1Q8N6G6 1762 aa6.99□□□□□ -1.29
HTT-206ENST00000509618 USP42Q9H9J4 1324 aaKnown RBP6.99□□□□□ -1.29
HTT-206ENST00000509618 MAPK8IP2Q13387 824 aaPredicted RBP6.98□□□□□ -1.29
HTT-206ENST00000509618 L3MBTL2Q969R5 705 aa6.98□□□□□ -1.29
HTT-206ENST00000509618 MCOLN1Q9GZU1 580 aa6.98□□□□□ -1.29
HTT-206ENST00000509618 TMOD3Q9NYL9 352 aa6.98□□□□□ -1.29
HTT-206ENST00000509618 COL11A2P13942 1736 aaPredicted RBP6.98□□□□□ -1.29
HTT-206ENST00000509618 TJP1Q07157 1748 aa6.98□□□□□ -1.29
HTT-206ENST00000509618 CNTNAP4Q9C0A0 1308 aa6.98□□□□□ -1.29
HTT-206ENST00000509618 ZC3H4Q9UPT8 1303 aaKnown RBP6.98□□□□□ -1.29
HTT-206ENST00000509618 DLEC1Q9Y238 1755 aa6.97□□□□□ -1.29
HTT-206ENST00000509618 ROCK2O75116 1388 aaKnown RBP6.97□□□□□ -1.29
HTT-206ENST00000509618 RPS6KA4O75676 772 aa6.97□□□□□ -1.29
HTT-206ENST00000509618 CCDC24Q8N4L8 307 aa6.97□□□□□ -1.29
HTT-206ENST00000509618 CFAP44Q96MT7 982 aa6.97□□□□□ -1.29
HTT-206ENST00000509618 GGNBP2Q9H3C7 697 aa6.97□□□□□ -1.29
HTT-206ENST00000509618 CGNL1Q0VF96 1302 aa6.97□□□□□ -1.29
HTT-206ENST00000509618 WDR33Q9C0J8 1336 aaKnown RBP6.97□□□□□ -1.29
HTT-206ENST00000509618 ZNF541Q9H0D2 1346 aa6.97□□□□□ -1.29
HTT-206ENST00000509618 INSRP06213 1382 aa6.96□□□□□ -1.29
HTT-206ENST00000509618 CCDC88AQ3V6T2 1871 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms