RNA–Protein interactions for RNA: ENST00000509436.1

NDFIP1-204, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 5

Gene NDFIP1, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-204ENST00000509436 AMIGO3Q86WK7 504 aa21.6■■□□□ 1.05
NDFIP1-204ENST00000509436 BRCA1P38398 1863 aaKnown RBP21.6■■□□□ 1.05
NDFIP1-204ENST00000509436 HMGB2P26583 209 aaKnown RBP21.59■■□□□ 1.05
NDFIP1-204ENST00000509436 MTHFSP49914 203 aa21.59■■□□□ 1.05
NDFIP1-204ENST00000509436 CFAP53Q96M91 514 aa21.59■■□□□ 1.05
NDFIP1-204ENST00000509436 PCDH10Q9P2E7 1040 aa21.58■■□□□ 1.05
NDFIP1-204ENST00000509436 TNRC6CQ9HCJ0 1690 aaKnown RBP21.58■■□□□ 1.05
NDFIP1-204ENST00000509436 SMG6Q86US8 1419 aaKnown RBP21.57■■□□□ 1.04
NDFIP1-204ENST00000509436 C16orf71Q8IYS4 520 aaPredicted RBP21.57■■□□□ 1.04
NDFIP1-204ENST00000509436 PLEKHG2Q9H7P9 1386 aa21.57■■□□□ 1.04
NDFIP1-204ENST00000509436 RGPD2P0DJD1 1756 aa21.56■■□□□ 1.04
NDFIP1-204ENST00000509436 MEGF6O75095 1541 aa21.56■■□□□ 1.04
NDFIP1-204ENST00000509436 CCDC184Q52MB2 194 aa21.56■■□□□ 1.04
NDFIP1-204ENST00000509436 POLKQ9UBT6 870 aa21.56■■□□□ 1.04
NDFIP1-204ENST00000509436 RRS1Q15050 365 aaKnown RBP21.55■■□□□ 1.04
NDFIP1-204ENST00000509436 PPM1GO15355 546 aaPredicted RBP21.54■■□□□ 1.04
NDFIP1-204ENST00000509436 FBLN1P23142 703 aa21.54■■□□□ 1.04
NDFIP1-204ENST00000509436 ZCRB1Q8TBF4 217 aaKnown RBP21.54■■□□□ 1.04
NDFIP1-204ENST00000509436 ARFGEF1Q9Y6D6 1849 aa21.54■■□□□ 1.04
NDFIP1-204ENST00000509436 KCPQ6ZWJ8 1503 aa21.54■■□□□ 1.04
NDFIP1-204ENST00000509436 PALLDQ8WX93 1383 aa21.53■■□□□ 1.04
NDFIP1-204ENST00000509436 EMILIN1Q9Y6C2 1016 aa21.53■■□□□ 1.04
NDFIP1-204ENST00000509436 KIF24Q5T7B8 1368 aa21.52■■□□□ 1.04
NDFIP1-204ENST00000509436 IP6K1Q92551 441 aa21.52■■□□□ 1.04
NDFIP1-204ENST00000509436 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.51■■□□□ 1.03
NDFIP1-204ENST00000509436 AMPHP49418 695 aa21.51■■□□□ 1.03
NDFIP1-204ENST00000509436 AK7Q96M32 723 aa21.51■■□□□ 1.03
NDFIP1-204ENST00000509436 BCS1LQ9Y276 419 aa21.51■■□□□ 1.03
NDFIP1-204ENST00000509436 MAP3K19Q56UN5 1328 aa21.51■■□□□ 1.03
NDFIP1-204ENST00000509436 RTL1A6NKG5 1358 aa21.5■■□□□ 1.03
NDFIP1-204ENST00000509436 INSRP06213 1382 aa21.5■■□□□ 1.03
NDFIP1-204ENST00000509436 TGFB2P61812 414 aa21.5■■□□□ 1.03
NDFIP1-204ENST00000509436 ARHGAP27Q6ZUM4 889 aa21.5■■□□□ 1.03
NDFIP1-204ENST00000509436 SMIM5Q71RC9 77 aa21.5■■□□□ 1.03
NDFIP1-204ENST00000509436 FLT4P35916 1363 aa21.49■■□□□ 1.03
NDFIP1-204ENST00000509436 SSFA2P28290 1259 aa21.49■■□□□ 1.03
NDFIP1-204ENST00000509436 C9orf131Q5VYM1 1079 aa21.49■■□□□ 1.03
NDFIP1-204ENST00000509436 SMC1BQ8NDV3 1235 aa21.49■■□□□ 1.03
NDFIP1-204ENST00000509436 KDM2BQ8NHM5 1336 aa21.49■■□□□ 1.03
NDFIP1-204ENST00000509436 ITGB4P16144 1822 aa21.48■■□□□ 1.03
NDFIP1-204ENST00000509436 COL3A1P02461 1466 aaPredicted RBP21.48■■□□□ 1.03
NDFIP1-204ENST00000509436 PHF14O94880 888 aa21.48■■□□□ 1.03
NDFIP1-204ENST00000509436 WDR43Q15061 677 aaKnown RBP eCLIP21.48■■□□□ 1.03
NDFIP1-204ENST00000509436 PNISRQ8TF01 805 aaKnown RBP21.48■■□□□ 1.03
NDFIP1-204ENST00000509436 FAM9BQ8IZU0 186 aa21.47■■□□□ 1.03
NDFIP1-204ENST00000509436 NUDCQ9Y266 331 aa21.47■■□□□ 1.03
NDFIP1-204ENST00000509436 DIAPH1O60610 1272 aaKnown RBP21.46■■□□□ 1.03
NDFIP1-204ENST00000509436 LTV1Q96GA3 475 aaPredicted RBP21.46■■□□□ 1.03
NDFIP1-204ENST00000509436 SBF1O95248 1867 aa21.45■■□□□ 1.02
NDFIP1-204ENST00000509436 A0A0G2JLW4 131 aa21.45■■□□□ 1.02
NDFIP1-204ENST00000509436 RRAGCQ9HB90 399 aa21.45■■□□□ 1.02
NDFIP1-204ENST00000509436 HOXC9P31274 260 aa21.44■■□□□ 1.02
NDFIP1-204ENST00000509436 MMP10P09238 476 aa21.43■■□□□ 1.02
NDFIP1-204ENST00000509436 C4AP0C0L4 1744 aa21.42■■□□□ 1.02
NDFIP1-204ENST00000509436 FCHSD2O94868 740 aa21.41■■□□□ 1.02
NDFIP1-204ENST00000509436 DPEP1P16444 411 aa21.41■■□□□ 1.02
NDFIP1-204ENST00000509436 HSP90AB2PQ58FF8 381 aa21.41■■□□□ 1.02
NDFIP1-204ENST00000509436 SMARCC1Q92922 1105 aaPredicted RBP21.4■■□□□ 1.02
NDFIP1-204ENST00000509436 U2SURPO15042 1029 aaKnown RBP21.39■■□□□ 1.01
NDFIP1-204ENST00000509436 KCNA3P22001 575 aa21.39■■□□□ 1.01
NDFIP1-204ENST00000509436 IL13P35225 146 aa21.39■■□□□ 1.01
NDFIP1-204ENST00000509436 MPRIPQ6WCQ1 1025 aa21.39■■□□□ 1.01
NDFIP1-204ENST00000509436 LINC00116Q8NCU8 138 aa21.39■■□□□ 1.01
NDFIP1-204ENST00000509436 EIF4A2Q14240 407 aaKnown RBP21.38■■□□□ 1.01
NDFIP1-204ENST00000509436 U2AF1L5P0DN76 240 aaPredicted RBP21.37■■□□□ 1.01
NDFIP1-204ENST00000509436 U2AF1Q01081 240 aaKnown RBP eCLIP21.37■■□□□ 1.01
NDFIP1-204ENST00000509436 DCAF5Q96JK2 942 aa21.37■■□□□ 1.01
NDFIP1-204ENST00000509436 RNF181Q9P0P0 153 aa21.37■■□□□ 1.01
NDFIP1-204ENST00000509436 ADAMTS8Q9UP79 889 aa21.37■■□□□ 1.01
NDFIP1-204ENST00000509436 PCDH11XQ9BZA7 1347 aa21.36■■□□□ 1.01
NDFIP1-204ENST00000509436 PCDH11YQ9BZA8 1340 aa21.36■■□□□ 1.01
NDFIP1-204ENST00000509436 NBPF6Q5VWK0 638 aa21.34■■□□□ 1.01
NDFIP1-204ENST00000509436 NBPF4Q96M43 638 aa21.34■■□□□ 1.01
NDFIP1-204ENST00000509436 PNNQ9H307 717 aaKnown RBP21.34■■□□□ 1.01
NDFIP1-204ENST00000509436 PRDM10Q9NQV6 1147 aa21.34■■□□□ 1.01
NDFIP1-204ENST00000509436 ZC3H4Q9UPT8 1303 aaKnown RBP21.33■■□□□ 1.01
NDFIP1-204ENST00000509436 LOC102724428A0A0B4J2F2 783 aa21.33■■□□□ 1.01
NDFIP1-204ENST00000509436 GNPATO15228 680 aa21.33■■□□□ 1.01
NDFIP1-204ENST00000509436 SIK1P57059 783 aa21.33■■□□□ 1.01
NDFIP1-204ENST00000509436 KDM6AO15550 1401 aaPredicted RBP21.32■■□□□ 1
NDFIP1-204ENST00000509436 FAM161AQ3B820 660 aa21.32■■□□□ 1
NDFIP1-204ENST00000509436 PIGBQ92521 554 aa21.32■■□□□ 1
NDFIP1-204ENST00000509436 YTHDC1Q96MU7 727 aaKnown RBP21.32■■□□□ 1
NDFIP1-204ENST00000509436 CCDC87Q9NVE4 849 aa21.32■■□□□ 1
NDFIP1-204ENST00000509436 FOXN1O15353 648 aa21.31■■□□□ 1
NDFIP1-204ENST00000509436 CYP27B1O15528 508 aa21.31■■□□□ 1
NDFIP1-204ENST00000509436 ITPK1Q13572 414 aa21.31■■□□□ 1
NDFIP1-204ENST00000509436 NLGN1Q8N2Q7 840 aa21.31■■□□□ 1
NDFIP1-204ENST00000509436 RAPGEF4Q8WZA2 1011 aa21.31■■□□□ 1
NDFIP1-204ENST00000509436 USHBP1Q8N6Y0 703 aa21.3■■□□□ 1
NDFIP1-204ENST00000509436 PIM2Q9P1W9 311 aa21.3■■□□□ 1
NDFIP1-204ENST00000509436 NEFMP07197 916 aa21.29■■□□□ 1
NDFIP1-204ENST00000509436 VEGFAP15692 232 aaPredicted RBP21.29■■□□□ 1
NDFIP1-204ENST00000509436 ZNF831Q5JPB2 1677 aa21.28■■□□□ 1
NDFIP1-204ENST00000509436 TATP17735 454 aaPredicted RBP21.28■■□□□ 1
NDFIP1-204ENST00000509436 RUNDC1Q96C34 613 aa21.28■■□□□ 1
NDFIP1-204ENST00000509436 EYA1Q99502 592 aa21.28■■□□□ 1
NDFIP1-204ENST00000509436 TIAM2Q8IVF5 1701 aa21.27■■□□□ 1
NDFIP1-204ENST00000509436 HMOX1P09601 288 aa21.27■■□□□ 1
NDFIP1-204ENST00000509436 DALRD3Q5D0E6 543 aaKnown RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms