RNA–Protein interactions for RNA: ENST00000509400.5

SIL1-212, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 4

Gene SIL1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-212ENST00000509400 WDR43Q15061 677 aaKnown RBP eCLIP15.1■□□□□ 0.01
SIL1-212ENST00000509400 CCER2I3L3R5 266 aa15.09■□□□□ 0.01
SIL1-212ENST00000509400 CYP27B1O15528 508 aa15.09■□□□□ 0.01
SIL1-212ENST00000509400 MTHFSDQ2M296 383 aaKnown RBP15.09■□□□□ 0.01
SIL1-212ENST00000509400 PLEKHO1Q53GL0 409 aaPredicted RBP15.09■□□□□ 0.01
SIL1-212ENST00000509400 CCDC146Q8IYE0 955 aa15.09■□□□□ 0.01
SIL1-212ENST00000509400 SYTL4Q96C24 671 aaPredicted RBP15.09■□□□□ 0.01
SIL1-212ENST00000509400 PLEKHF1Q96S99 279 aa15.09■□□□□ 0.01
SIL1-212ENST00000509400 SPG7Q9UQ90 795 aa15.08■□□□□ 0
SIL1-212ENST00000509400 COL23A1Q86Y22 540 aaPredicted RBP15.07■□□□□ 0
SIL1-212ENST00000509400 FAM9BQ8IZU0 186 aa15.07■□□□□ 0
SIL1-212ENST00000509400 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.07■□□□□ 0
SIL1-212ENST00000509400 AMOTQ4VCS5 1084 aa15.06■□□□□ 0
SIL1-212ENST00000509400 ZNF530Q6P9A1 599 aaPredicted RBP15.06■□□□□ 0
SIL1-212ENST00000509400 PHKG2P15735 406 aa15.05■□□□□ -0
SIL1-212ENST00000509400 IFFO2Q5TF58 517 aa15.05■□□□□ -0
SIL1-212ENST00000509400 MSL1Q68DK7 614 aa15.05■□□□□ -0
SIL1-212ENST00000509400 CCNL1Q9UK58 526 aaPredicted RBP15.04■□□□□ -0
SIL1-212ENST00000509400 IFNL2Q8IZJ0 200 aa15.03■□□□□ -0
SIL1-212ENST00000509400 RUNDC1Q96C34 613 aa15.03■□□□□ -0
SIL1-212ENST00000509400 PCDH11XQ9BZA7 1347 aa15.02■□□□□ -0
SIL1-212ENST00000509400 PCDH11YQ9BZA8 1340 aa15.02■□□□□ -0
SIL1-212ENST00000509400 MSH5O43196 834 aa15.02■□□□□ -0
SIL1-212ENST00000509400 NKX1-1Q15270 411 aaPredicted RBP15.02■□□□□ -0
SIL1-212ENST00000509400 MPRIPQ6WCQ1 1025 aa15.02■□□□□ -0
SIL1-212ENST00000509400 GAS2L2Q8NHY3 880 aa15.02■□□□□ -0
SIL1-212ENST00000509400 LGR6Q9HBX8 967 aa15.02■□□□□ -0
SIL1-212ENST00000509400 RRP7AQ9Y3A4 280 aaKnown RBP15.02■□□□□ -0
SIL1-212ENST00000509400 ATP10DQ9P241 1426 aa15.01□□□□□ -0.01
SIL1-212ENST00000509400 C5P01031 1676 aa15.01□□□□□ -0.01
SIL1-212ENST00000509400 GRIN3BO60391 1043 aa15.01□□□□□ -0.01
SIL1-212ENST00000509400 AKAP4Q5JQC9 854 aa15.01□□□□□ -0.01
SIL1-212ENST00000509400 AMIGO3Q86WK7 504 aa15.01□□□□□ -0.01
SIL1-212ENST00000509400 PNNQ9H307 717 aaKnown RBP15.01□□□□□ -0.01
SIL1-212ENST00000509400 TAF1LQ8IZX4 1826 aa15.01□□□□□ -0.01
SIL1-212ENST00000509400 MAPK8IP3Q9UPT6 1336 aa15□□□□□ -0.01
SIL1-212ENST00000509400 APAF1O14727 1248 aa15□□□□□ -0.01
SIL1-212ENST00000509400 TMPOP42166 694 aaKnown RBP15□□□□□ -0.01
SIL1-212ENST00000509400 NEUROD2Q15784 382 aa15□□□□□ -0.01
SIL1-212ENST00000509400 NFE2L2Q16236 605 aa15□□□□□ -0.01
SIL1-212ENST00000509400 C1orf141Q5JVX7 400 aa15□□□□□ -0.01
SIL1-212ENST00000509400 RNMTO43148 476 aaKnown RBP14.99□□□□□ -0.01
SIL1-212ENST00000509400 NEFMP07197 916 aa14.99□□□□□ -0.01
SIL1-212ENST00000509400 DCTN1Q14203 1278 aa14.99□□□□□ -0.01
SIL1-212ENST00000509400 SMIM5Q71RC9 77 aa14.99□□□□□ -0.01
SIL1-212ENST00000509400 IL17REQ8NFR9 667 aa14.99□□□□□ -0.01
SIL1-212ENST00000509400 TOGARAM1Q9Y4F4 1720 aa14.98□□□□□ -0.01
SIL1-212ENST00000509400 GNAT3A8MTJ3 354 aa14.98□□□□□ -0.01
SIL1-212ENST00000509400 RIPK4P57078 832 aa14.98□□□□□ -0.01
SIL1-212ENST00000509400 ADCY9O60503 1353 aa14.98□□□□□ -0.01
SIL1-212ENST00000509400 PLEKHG2Q9H7P9 1386 aa14.98□□□□□ -0.01
SIL1-212ENST00000509400 HSP90AB1P08238 724 aaKnown RBP14.97□□□□□ -0.01
SIL1-212ENST00000509400 MCM10Q7L590 875 aa14.96□□□□□ -0.01
SIL1-212ENST00000509400 DCAF5Q96JK2 942 aa14.96□□□□□ -0.01
SIL1-212ENST00000509400 THUMPD2Q9BTF0 503 aaKnown RBP14.96□□□□□ -0.01
SIL1-212ENST00000509400 CD2APQ9Y5K6 639 aa14.96□□□□□ -0.01
SIL1-212ENST00000509400 KDM6AO15550 1401 aaPredicted RBP14.95□□□□□ -0.02
SIL1-212ENST00000509400 ZNF526Q8TF50 670 aaPredicted RBP14.95□□□□□ -0.02
SIL1-212ENST00000509400 WWC3Q9ULE0 1092 aa14.95□□□□□ -0.02
SIL1-212ENST00000509400 TRIM35Q9UPQ4 493 aa14.95□□□□□ -0.02
SIL1-212ENST00000509400 SALL2Q9Y467 1007 aaPredicted RBP14.95□□□□□ -0.02
SIL1-212ENST00000509400 PALLDQ8WX93 1383 aa14.95□□□□□ -0.02
SIL1-212ENST00000509400 C4BP0C0L5 1744 aa14.95□□□□□ -0.02
SIL1-212ENST00000509400 ITGB4P16144 1822 aa14.94□□□□□ -0.02
SIL1-212ENST00000509400 ERVV-2B6SEH9 535 aa14.94□□□□□ -0.02
SIL1-212ENST00000509400 PIGBQ92521 554 aa14.94□□□□□ -0.02
SIL1-212ENST00000509400 UBR3Q6ZT12 1888 aa14.94□□□□□ -0.02
SIL1-212ENST00000509400 HTATSF1O43719 755 aaKnown RBP14.93□□□□□ -0.02
SIL1-212ENST00000509400 CABP4P57796 275 aa14.93□□□□□ -0.02
SIL1-212ENST00000509400 NFATC2IPQ8NCF5 419 aa14.93□□□□□ -0.02
SIL1-212ENST00000509400 GPBP1L1Q9HC44 474 aaPredicted RBP14.93□□□□□ -0.02
SIL1-212ENST00000509400 PKD1L3Q7Z443 1732 aa14.92□□□□□ -0.02
SIL1-212ENST00000509400 RTF1Q92541 710 aaKnown RBP14.92□□□□□ -0.02
SIL1-212ENST00000509400 HSPA6P17066 643 aa14.91□□□□□ -0.02
SIL1-212ENST00000509400 SLC52A2Q9HAB3 445 aa14.91□□□□□ -0.02
SIL1-212ENST00000509400 TMOD3Q9NYL9 352 aa14.91□□□□□ -0.02
SIL1-212ENST00000509400 PHF14O94880 888 aa14.9□□□□□ -0.02
SIL1-212ENST00000509400 FLAD1Q8NFF5 587 aa14.9□□□□□ -0.02
SIL1-212ENST00000509400 MIS18AQ9NYP9 233 aa14.9□□□□□ -0.02
SIL1-212ENST00000509400 ASAP1Q9ULH1 1129 aa14.9□□□□□ -0.02
SIL1-212ENST00000509400 CEMIPQ8WUJ3 1361 aa14.89□□□□□ -0.03
SIL1-212ENST00000509400 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.89□□□□□ -0.03
SIL1-212ENST00000509400 KCNQ3O43525 872 aa14.89□□□□□ -0.03
SIL1-212ENST00000509400 SLC39A6Q13433 755 aa14.89□□□□□ -0.03
SIL1-212ENST00000509400 ATG3Q9NT62 314 aa14.89□□□□□ -0.03
SIL1-212ENST00000509400 KIF3CO14782 793 aa14.88□□□□□ -0.03
SIL1-212ENST00000509400 TEFQ10587 303 aa14.88□□□□□ -0.03
SIL1-212ENST00000509400 LINC00116Q8NCU8 138 aa14.88□□□□□ -0.03
SIL1-212ENST00000509400 AK7Q96M32 723 aa14.88□□□□□ -0.03
SIL1-212ENST00000509400 PCNTO95613 3336 aa14.88□□□□□ -0.03
SIL1-212ENST00000509400 LMOD3Q0VAK6 560 aa14.87□□□□□ -0.03
SIL1-212ENST00000509400 TAF7Q15545 349 aaPredicted RBP14.87□□□□□ -0.03
SIL1-212ENST00000509400 WWC1Q8IX03 1113 aa14.87□□□□□ -0.03
SIL1-212ENST00000509400 KIAA1551Q9HCM1 1747 aa14.86□□□□□ -0.03
SIL1-212ENST00000509400 BTBD11A6QL63 1104 aa14.85□□□□□ -0.03
SIL1-212ENST00000509400 ITPK1Q13572 414 aa14.85□□□□□ -0.03
SIL1-212ENST00000509400 CCDC27Q2M243 656 aa14.85□□□□□ -0.03
SIL1-212ENST00000509400 SMARCC1Q92922 1105 aaPredicted RBP14.85□□□□□ -0.03
SIL1-212ENST00000509400 CICQ96RK0 1608 aaPredicted RBP14.84□□□□□ -0.03
SIL1-212ENST00000509400 LOC102724428A0A0B4J2F2 783 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms