RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 SIPA1L3O60292 1781 aaPredicted RBP11.7□□□□□ -0.54
PDLIM5-213ENST00000509357 LOC102724428A0A0B4J2F2 783 aa11.7□□□□□ -0.54
PDLIM5-213ENST00000509357 ATP6V1AP38606 617 aa11.7□□□□□ -0.54
PDLIM5-213ENST00000509357 PTGER2P43116 358 aa11.7□□□□□ -0.54
PDLIM5-213ENST00000509357 SIK1P57059 783 aa11.7□□□□□ -0.54
PDLIM5-213ENST00000509357 PHACTR3Q96KR7 559 aa11.7□□□□□ -0.54
PDLIM5-213ENST00000509357 ARXQ96QS3 562 aa11.7□□□□□ -0.54
PDLIM5-213ENST00000509357 ATG3Q9NT62 314 aa11.7□□□□□ -0.54
PDLIM5-213ENST00000509357 PHF14O94880 888 aa11.69□□□□□ -0.54
PDLIM5-213ENST00000509357 AKAP4Q5JQC9 854 aa11.69□□□□□ -0.54
PDLIM5-213ENST00000509357 FLAD1Q8NFF5 587 aa11.69□□□□□ -0.54
PDLIM5-213ENST00000509357 PLEKHF1Q96S99 279 aa11.69□□□□□ -0.54
PDLIM5-213ENST00000509357 NUDCQ9Y266 331 aa11.69□□□□□ -0.54
PDLIM5-213ENST00000509357 COL23A1Q86Y22 540 aaPredicted RBP11.68□□□□□ -0.54
PDLIM5-213ENST00000509357 NFATC2IPQ8NCF5 419 aa11.68□□□□□ -0.54
PDLIM5-213ENST00000509357 FHDC1Q9C0D6 1143 aaPredicted RBP11.68□□□□□ -0.54
PDLIM5-213ENST00000509357 PAPPAQ13219 1627 aa11.68□□□□□ -0.54
PDLIM5-213ENST00000509357 MTHFSDQ2M296 383 aaKnown RBP11.67□□□□□ -0.54
PDLIM5-213ENST00000509357 MSL1Q68DK7 614 aa11.67□□□□□ -0.54
PDLIM5-213ENST00000509357 CASZ1Q86V15 1759 aa11.67□□□□□ -0.54
PDLIM5-213ENST00000509357 GNPATO15228 680 aa11.66□□□□□ -0.54
PDLIM5-213ENST00000509357 PTCD1O75127 700 aaKnown RBP11.66□□□□□ -0.54
PDLIM5-213ENST00000509357 U2AF1L5P0DN76 240 aaPredicted RBP11.66□□□□□ -0.54
PDLIM5-213ENST00000509357 PRKAR2BP31323 418 aa11.66□□□□□ -0.54
PDLIM5-213ENST00000509357 U2AF1Q01081 240 aaKnown RBP eCLIP11.66□□□□□ -0.541e-7■■■■■ 28.2
PDLIM5-213ENST00000509357 LINC00116Q8NCU8 138 aa11.66□□□□□ -0.54
PDLIM5-213ENST00000509357 SYT17Q9BSW7 474 aa11.66□□□□□ -0.54
PDLIM5-213ENST00000509357 LY75O60449 1722 aa11.66□□□□□ -0.54
PDLIM5-213ENST00000509357 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.65□□□□□ -0.54
PDLIM5-213ENST00000509357 ANP32CO43423 234 aa11.65□□□□□ -0.54
PDLIM5-213ENST00000509357 ITPK1Q13572 414 aa11.65□□□□□ -0.54
PDLIM5-213ENST00000509357 MIER1Q8N108 512 aa11.65□□□□□ -0.54
PDLIM5-213ENST00000509357 SGIP1Q9BQI5 828 aa11.65□□□□□ -0.54
PDLIM5-213ENST00000509357 LGR6Q9HBX8 967 aa11.65□□□□□ -0.54
PDLIM5-213ENST00000509357 ADAMTS8Q9UP79 889 aa11.65□□□□□ -0.54
PDLIM5-213ENST00000509357 MRC1P22897 1456 aa11.64□□□□□ -0.55
PDLIM5-213ENST00000509357 RNMTO43148 476 aaKnown RBP11.64□□□□□ -0.55
PDLIM5-213ENST00000509357 DIEXFQ68CQ4 756 aaKnown RBP11.64□□□□□ -0.55
PDLIM5-213ENST00000509357 SMIM5Q71RC9 77 aa11.64□□□□□ -0.55
PDLIM5-213ENST00000509357 GAS2L2Q8NHY3 880 aa11.64□□□□□ -0.55
PDLIM5-213ENST00000509357 PNISRQ8TF01 805 aaKnown RBP11.64□□□□□ -0.55
PDLIM5-213ENST00000509357 SLC52A2Q9HAB3 445 aa11.64□□□□□ -0.55
PDLIM5-213ENST00000509357 SENP3-EIF4A1A0A087X0R7 540 aa11.63□□□□□ -0.55
PDLIM5-213ENST00000509357 SSFA2P28290 1259 aa11.63□□□□□ -0.55
PDLIM5-213ENST00000509357 CCDC146Q8IYE0 955 aa11.63□□□□□ -0.55
PDLIM5-213ENST00000509357 PELP1Q8IZL8 1130 aaKnown RBP11.63□□□□□ -0.55
PDLIM5-213ENST00000509357 RTCBQ9Y3I0 505 aaKnown RBP11.63□□□□□ -0.55
PDLIM5-213ENST00000509357 UBR2Q8IWV8 1755 aa11.62□□□□□ -0.55
PDLIM5-213ENST00000509357 GNAT3A8MTJ3 354 aa11.62□□□□□ -0.55
PDLIM5-213ENST00000509357 NEFMP07197 916 aa11.62□□□□□ -0.55
PDLIM5-213ENST00000509357 TEFQ10587 303 aa11.62□□□□□ -0.55
PDLIM5-213ENST00000509357 TRAPPC3LQ5T215 181 aa11.62□□□□□ -0.55
PDLIM5-213ENST00000509357 TAF1LQ8IZX4 1826 aa11.61□□□□□ -0.55
PDLIM5-213ENST00000509357 TUBGCP6Q96RT7 1819 aa11.61□□□□□ -0.55
PDLIM5-213ENST00000509357 FCHSD2O94868 740 aa11.61□□□□□ -0.55
PDLIM5-213ENST00000509357 RFC4P35249 363 aa11.61□□□□□ -0.55
PDLIM5-213ENST00000509357 SLC39A6Q13433 755 aa11.61□□□□□ -0.55
PDLIM5-213ENST00000509357 GPR162Q16538 588 aa11.61□□□□□ -0.55
PDLIM5-213ENST00000509357 AMIGO3Q86WK7 504 aa11.61□□□□□ -0.55
PDLIM5-213ENST00000509357 TTC5Q8N0Z6 440 aa11.61□□□□□ -0.55
PDLIM5-213ENST00000509357 SLC4A9Q96Q91 983 aa11.61□□□□□ -0.55
PDLIM5-213ENST00000509357 C5P01031 1676 aa11.61□□□□□ -0.55
PDLIM5-213ENST00000509357 MAP3K5Q99683 1374 aa11.6□□□□□ -0.55
PDLIM5-213ENST00000509357 RC3H1Q5TC82 1133 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-213ENST00000509357 IL17REQ8NFR9 667 aa11.6□□□□□ -0.55
PDLIM5-213ENST00000509357 RTF1Q92541 710 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-213ENST00000509357 MRS2Q9HD23 443 aa11.6□□□□□ -0.55
PDLIM5-213ENST00000509357 C4BP0C0L5 1744 aa11.6□□□□□ -0.55
PDLIM5-213ENST00000509357 KDM3BQ7LBC6 1761 aa11.59□□□□□ -0.55
PDLIM5-213ENST00000509357 CEMIPQ8WUJ3 1361 aa11.59□□□□□ -0.55
PDLIM5-213ENST00000509357 YY1P25490 414 aa11.59□□□□□ -0.55
PDLIM5-213ENST00000509357 DCTN1Q14203 1278 aa11.59□□□□□ -0.55
PDLIM5-213ENST00000509357 TJP1Q07157 1748 aa11.59□□□□□ -0.55
PDLIM5-213ENST00000509357 RPS6KA4O75676 772 aa11.58□□□□□ -0.56
PDLIM5-213ENST00000509357 ADRA2BP18089 450 aa11.58□□□□□ -0.56
PDLIM5-213ENST00000509357 CRKLP46109 303 aaKnown RBP11.58□□□□□ -0.56
PDLIM5-213ENST00000509357 DNAJC10Q8IXB1 793 aa11.58□□□□□ -0.56
PDLIM5-213ENST00000509357 ARHGEF1Q92888 912 aaKnown RBP11.58□□□□□ -0.56
PDLIM5-213ENST00000509357 THUMPD2Q9BTF0 503 aaKnown RBP11.58□□□□□ -0.56
PDLIM5-213ENST00000509357 RRP7AQ9Y3A4 280 aaKnown RBP11.58□□□□□ -0.56
PDLIM5-213ENST00000509357 KCPQ6ZWJ8 1503 aa11.58□□□□□ -0.56
PDLIM5-213ENST00000509357 CNTNAP4Q9C0A0 1308 aa11.58□□□□□ -0.56
PDLIM5-213ENST00000509357 COL5A3P25940 1745 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-213ENST00000509357 NLGN2Q8NFZ4 835 aa11.57□□□□□ -0.56
PDLIM5-213ENST00000509357 QSER1Q2KHR3 1735 aa11.57□□□□□ -0.56
PDLIM5-213ENST00000509357 CICQ96RK0 1608 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-213ENST00000509357 MMP10P09238 476 aa11.56□□□□□ -0.56
PDLIM5-213ENST00000509357 NFE2L2Q16236 605 aa11.56□□□□□ -0.56
PDLIM5-213ENST00000509357 MCM10Q7L590 875 aa11.56□□□□□ -0.56
PDLIM5-213ENST00000509357 NLGN1Q8N2Q7 840 aa11.56□□□□□ -0.56
PDLIM5-213ENST00000509357 PNNQ9H307 717 aaKnown RBP11.56□□□□□ -0.56
PDLIM5-213ENST00000509357 CCDC87Q9NVE4 849 aa11.56□□□□□ -0.56
PDLIM5-213ENST00000509357 TRIM35Q9UPQ4 493 aa11.56□□□□□ -0.56
PDLIM5-213ENST00000509357 CD2APQ9Y5K6 639 aa11.56□□□□□ -0.56
PDLIM5-213ENST00000509357 BTBD11A6QL63 1104 aa11.55□□□□□ -0.56
PDLIM5-213ENST00000509357 ZPR1O75312 459 aa11.55□□□□□ -0.56
PDLIM5-213ENST00000509357 STARD3NLO95772 234 aa11.55□□□□□ -0.56
PDLIM5-213ENST00000509357 TMPOP42166 694 aaKnown RBP11.55□□□□□ -0.56
PDLIM5-213ENST00000509357 VSIG10Q8N0Z9 540 aa11.55□□□□□ -0.56
PDLIM5-213ENST00000509357 MYH14Q7Z406 1995 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms