RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 RAB3GAP1Q15042 981 aa13.52□□□□□ -0.25
SEC31A-228ENST00000509142 RGPD1P0DJD0 1748 aa13.51□□□□□ -0.25
SEC31A-228ENST00000509142 TEFQ10587 303 aa13.51□□□□□ -0.25
SEC31A-228ENST00000509142 PIK3C2AO00443 1686 aa13.51□□□□□ -0.25
SEC31A-228ENST00000509142 EXOC6BQ9Y2D4 811 aa13.51□□□□□ -0.25
SEC31A-228ENST00000509142 RIMS1Q86UR5 1692 aaKnown RBP13.5□□□□□ -0.25
SEC31A-228ENST00000509142 NBPF6Q5VWK0 638 aa13.5□□□□□ -0.25
SEC31A-228ENST00000509142 NBPF4Q96M43 638 aa13.5□□□□□ -0.25
SEC31A-228ENST00000509142 XRN1Q8IZH2 1706 aaKnown RBP13.5□□□□□ -0.25
SEC31A-228ENST00000509142 FMN2Q9NZ56 1722 aa13.5□□□□□ -0.25
SEC31A-228ENST00000509142 SETD1BQ9UPS6 1966 aaKnown RBP13.49□□□□□ -0.25
SEC31A-228ENST00000509142 SDSP20132 328 aa13.49□□□□□ -0.25
SEC31A-228ENST00000509142 BABAM1Q9NWV8 329 aa13.49□□□□□ -0.25
SEC31A-228ENST00000509142 ZNF530Q6P9A1 599 aaPredicted RBP13.49□□□□□ -0.25
SEC31A-228ENST00000509142 AK9Q5TCS8 1911 aa13.49□□□□□ -0.25
SEC31A-228ENST00000509142 PLEKHO1Q53GL0 409 aaPredicted RBP13.49□□□□□ -0.25
SEC31A-228ENST00000509142 K7ELQ4 463 aaPredicted RBP13.48□□□□□ -0.25
SEC31A-228ENST00000509142 UBTFL1P0CB47 393 aaPredicted RBP13.48□□□□□ -0.25
SEC31A-228ENST00000509142 SSFA2P28290 1259 aa13.48□□□□□ -0.25
SEC31A-228ENST00000509142 LRRC59Q96AG4 307 aaKnown RBP13.48□□□□□ -0.25
SEC31A-228ENST00000509142 ORAI2Q96SN7 254 aa13.48□□□□□ -0.25
SEC31A-228ENST00000509142 C1orf141Q5JVX7 400 aa13.48□□□□□ -0.25
SEC31A-228ENST00000509142 CHMP4AQ9BY43 222 aa13.48□□□□□ -0.25
SEC31A-228ENST00000509142 SOS1Q07889 1333 aaPredicted RBP13.48□□□□□ -0.25
SEC31A-228ENST00000509142 LRRCC1Q9C099 1032 aa13.48□□□□□ -0.25
SEC31A-228ENST00000509142 PROSER2Q86WR7 435 aaPredicted RBP13.47□□□□□ -0.25
SEC31A-228ENST00000509142 LGR6Q9HBX8 967 aa13.47□□□□□ -0.25
SEC31A-228ENST00000509142 LRRFIP2Q9Y608 721 aaKnown RBP13.47□□□□□ -0.25
SEC31A-228ENST00000509142 DDX11L8A8MPP1 907 aa13.47□□□□□ -0.25
SEC31A-228ENST00000509142 REC8O95072 547 aa13.47□□□□□ -0.25
SEC31A-228ENST00000509142 GRPEL1Q9HAV7 217 aa13.47□□□□□ -0.25
SEC31A-228ENST00000509142 GCP02774 474 aa13.46□□□□□ -0.25
SEC31A-228ENST00000509142 MPRIPQ6WCQ1 1025 aa13.46□□□□□ -0.25
SEC31A-228ENST00000509142 PHAXQ9H814 394 aaKnown RBP13.46□□□□□ -0.25
SEC31A-228ENST00000509142 ERBB4Q15303 1308 aa13.46□□□□□ -0.25
SEC31A-228ENST00000509142 RABEP1Q15276 862 aa13.46□□□□□ -0.25
SEC31A-228ENST00000509142 CIZ1Q9ULV3 898 aaPredicted RBP13.46□□□□□ -0.25
SEC31A-228ENST00000509142 BTBD11A6QL63 1104 aa13.46□□□□□ -0.26
SEC31A-228ENST00000509142 PDE1AP54750 535 aa13.46□□□□□ -0.26
SEC31A-228ENST00000509142 ATP8B2P98198 1209 aa13.46□□□□□ -0.26
SEC31A-228ENST00000509142 TRIM6-TRIM34B2RNG4 842 aa13.45□□□□□ -0.26
SEC31A-228ENST00000509142 PKP1Q13835 747 aa13.45□□□□□ -0.26
SEC31A-228ENST00000509142 SRCIN1Q9C0H9 1055 aa13.45□□□□□ -0.26
SEC31A-228ENST00000509142 USP26Q9BXU7 913 aa13.45□□□□□ -0.26
SEC31A-228ENST00000509142 ADGRL3Q9HAR2 1447 aa13.45□□□□□ -0.26
SEC31A-228ENST00000509142 PNMA6EA0A0J9YXQ4 647 aa13.45□□□□□ -0.26
SEC31A-228ENST00000509142 GBP4Q96PP9 640 aa13.45□□□□□ -0.26
SEC31A-228ENST00000509142 MRE11P49959 708 aa13.44□□□□□ -0.26
SEC31A-228ENST00000509142 AKAP4Q5JQC9 854 aa13.44□□□□□ -0.26
SEC31A-228ENST00000509142 TSHZ3Q63HK5 1081 aa13.44□□□□□ -0.26
SEC31A-228ENST00000509142 RILPL2Q969X0 211 aa13.44□□□□□ -0.26
SEC31A-228ENST00000509142 ERC2O15083 957 aa13.44□□□□□ -0.26
SEC31A-228ENST00000509142 AMOTQ4VCS5 1084 aa13.44□□□□□ -0.26
SEC31A-228ENST00000509142 EIF4A1P60842 406 aaKnown RBP13.43□□□□□ -0.26
SEC31A-228ENST00000509142 KRT28Q7Z3Y7 464 aa13.43□□□□□ -0.26
SEC31A-228ENST00000509142 ANKRD24Q8TF21 1146 aa13.43□□□□□ -0.26
SEC31A-228ENST00000509142 USP44Q9H0E7 712 aa13.43□□□□□ -0.26
SEC31A-228ENST00000509142 CHPF2Q9P2E5 772 aa13.43□□□□□ -0.26
SEC31A-228ENST00000509142 MX1P20591 662 aa13.43□□□□□ -0.26
SEC31A-228ENST00000509142 ST18O60284 1047 aa13.42□□□□□ -0.26
SEC31A-228ENST00000509142 NPHP4O75161 1426 aaPredicted RBP13.42□□□□□ -0.26
SEC31A-228ENST00000509142 SURF6O75683 361 aaKnown RBP13.42□□□□□ -0.26
SEC31A-228ENST00000509142 KCNQ3O43525 872 aa13.42□□□□□ -0.26
SEC31A-228ENST00000509142 ANXA1P04083 346 aa13.42□□□□□ -0.26
SEC31A-228ENST00000509142 PI4KAP2A4QPH2 592 aa13.42□□□□□ -0.26
SEC31A-228ENST00000509142 PI4KAP1Q8N8J0 262 aa13.42□□□□□ -0.26
SEC31A-228ENST00000509142 CLEC17AQ6ZS10 378 aa13.41□□□□□ -0.26
SEC31A-228ENST00000509142 ARHGEF25Q86VW2 580 aa13.41□□□□□ -0.26
SEC31A-228ENST00000509142 CHAMP1Q96JM3 812 aa13.41□□□□□ -0.26
SEC31A-228ENST00000509142 IL1RAPL2Q9NP60 686 aa13.41□□□□□ -0.26
SEC31A-228ENST00000509142 ZC3H6P61129 1189 aaKnown RBP13.41□□□□□ -0.26
SEC31A-228ENST00000509142 DNAAF4Q8WXU2 420 aa13.41□□□□□ -0.26
SEC31A-228ENST00000509142 OSBPL3Q9H4L5 887 aa13.41□□□□□ -0.26
SEC31A-228ENST00000509142 OS9Q13438 667 aaPredicted RBP13.41□□□□□ -0.26
SEC31A-228ENST00000509142 NWD1Q149M9 1564 aa13.41□□□□□ -0.26
SEC31A-228ENST00000509142 BAG4O95429 457 aaKnown RBP13.4□□□□□ -0.26
SEC31A-228ENST00000509142 CYP2E1P05181 493 aaPredicted RBP13.4□□□□□ -0.26
SEC31A-228ENST00000509142 GOLGA6L22H0YM25 854 aa13.4□□□□□ -0.26
SEC31A-228ENST00000509142 SRGAP3O43295 1099 aa13.4□□□□□ -0.26
SEC31A-228ENST00000509142 HOXB7P09629 217 aa13.4□□□□□ -0.26
SEC31A-228ENST00000509142 PPP1R42Q7Z4L9 355 aa13.4□□□□□ -0.26
SEC31A-228ENST00000509142 PRKCSHP14314 528 aaPredicted RBP13.4□□□□□ -0.26
SEC31A-228ENST00000509142 MCCP23508 829 aa13.4□□□□□ -0.26
SEC31A-228ENST00000509142 ZGPATQ8N5A5 531 aaKnown RBP13.4□□□□□ -0.26
SEC31A-228ENST00000509142 CEMIPQ8WUJ3 1361 aa13.4□□□□□ -0.26
SEC31A-228ENST00000509142 CHD2O14647 1828 aaKnown RBP13.4□□□□□ -0.26
SEC31A-228ENST00000509142 RNMTO43148 476 aaKnown RBP13.39□□□□□ -0.27
SEC31A-228ENST00000509142 CLCN1P35523 988 aa13.39□□□□□ -0.27
SEC31A-228ENST00000509142 ATF3P18847 181 aa13.39□□□□□ -0.27
SEC31A-228ENST00000509142 DBF4Q9UBU7 674 aaPredicted RBP13.39□□□□□ -0.27
SEC31A-228ENST00000509142 ZDHHC9Q9Y397 364 aa13.39□□□□□ -0.27
SEC31A-228ENST00000509142 ANO2Q9NQ90 1003 aa13.39□□□□□ -0.27
SEC31A-228ENST00000509142 NLRP2Q9NX02 1062 aa13.39□□□□□ -0.27
SEC31A-228ENST00000509142 C9orf78Q9NZ63 289 aaPredicted RBP13.39□□□□□ -0.27
SEC31A-228ENST00000509142 IBTKQ9P2D0 1353 aaPredicted RBP13.38□□□□□ -0.27
SEC31A-228ENST00000509142 NUTM1Q86Y26 1132 aa13.38□□□□□ -0.27
SEC31A-228ENST00000509142 RAPGEF4Q8WZA2 1011 aa13.38□□□□□ -0.27
SEC31A-228ENST00000509142 C19orf44Q9H6X5 657 aa13.38□□□□□ -0.27
SEC31A-228ENST00000509142 CSB-PGBD3P0DP91 1061 aa13.38□□□□□ -0.27
SEC31A-228ENST00000509142 RAB11FIP3O75154 756 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms