RNA–Protein interactions for RNA: ENST00000508717.1

TRIO-212, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 859 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-212ENST00000508717 IL16Q14005 1332 aa17.25■□□□□ 0.35
TRIO-212ENST00000508717 TAF7Q15545 349 aaPredicted RBP17.25■□□□□ 0.35
TRIO-212ENST00000508717 PLSCR1O15162 318 aa17.24■□□□□ 0.35
TRIO-212ENST00000508717 TRIM37O94972 964 aa17.24■□□□□ 0.35
TRIO-212ENST00000508717 ZNF853P0CG23 659 aa17.24■□□□□ 0.35
TRIO-212ENST00000508717 PTF1AQ7RTS3 328 aa17.23■□□□□ 0.35
TRIO-212ENST00000508717 CFAP44Q96MT7 982 aa17.23■□□□□ 0.35
TRIO-212ENST00000508717 KAT6BQ8WYB5 2073 aa17.23■□□□□ 0.35
TRIO-212ENST00000508717 CHL1O00533 1208 aa17.22■□□□□ 0.35
TRIO-212ENST00000508717 SMARCC1Q92922 1105 aaPredicted RBP17.22■□□□□ 0.35
TRIO-212ENST00000508717 SYTL4Q96C24 671 aaPredicted RBP17.22■□□□□ 0.35
TRIO-212ENST00000508717 THUMPD2Q9BTF0 503 aaKnown RBP17.22■□□□□ 0.35
TRIO-212ENST00000508717 IFT57Q9NWB7 429 aa17.22■□□□□ 0.35
TRIO-212ENST00000508717 ATG3Q9NT62 314 aa17.21■□□□□ 0.35
TRIO-212ENST00000508717 TNS1Q9HBL0 1735 aaKnown RBP17.21■□□□□ 0.35
TRIO-212ENST00000508717 BTAF1O14981 1849 aa17.2■□□□□ 0.34
TRIO-212ENST00000508717 BTBD11A6QL63 1104 aa17.2■□□□□ 0.34
TRIO-212ENST00000508717 GNAI1P63096 354 aa17.2■□□□□ 0.34
TRIO-212ENST00000508717 ZNF790Q6PG37 636 aa17.2■□□□□ 0.34
TRIO-212ENST00000508717 UPF1Q92900 1129 aaKnown RBP eCLIP17.2■□□□□ 0.34
TRIO-212ENST00000508717 PAPPAQ13219 1627 aa17.2■□□□□ 0.34
TRIO-212ENST00000508717 HNRNPUQ00839 825 aaKnown RBP eCLIP17.19■□□□□ 0.34
TRIO-212ENST00000508717 ASAP1Q9ULH1 1129 aa17.19■□□□□ 0.34
TRIO-212ENST00000508717 ZBED9Q6R2W3 1325 aa17.19■□□□□ 0.34
TRIO-212ENST00000508717 RGPD3A6NKT7 1758 aaPredicted RBP17.18■□□□□ 0.34
TRIO-212ENST00000508717 RGPD4Q7Z3J3 1758 aa17.18■□□□□ 0.34
TRIO-212ENST00000508717 HEG1Q9ULI3 1381 aa17.17■□□□□ 0.34
TRIO-212ENST00000508717 ZNF831Q5JPB2 1677 aa17.17■□□□□ 0.34
TRIO-212ENST00000508717 APBA3O96018 575 aa17.17■□□□□ 0.34
TRIO-212ENST00000508717 HMGB2P26583 209 aaKnown RBP17.17■□□□□ 0.34
TRIO-212ENST00000508717 VSIG10Q8N0Z9 540 aa17.17■□□□□ 0.34
TRIO-212ENST00000508717 SALL2Q9Y467 1007 aaPredicted RBP17.17■□□□□ 0.34
TRIO-212ENST00000508717 KDM3BQ7LBC6 1761 aa17.17■□□□□ 0.34
TRIO-212ENST00000508717 PALLDQ8WX93 1383 aa17.16■□□□□ 0.34
TRIO-212ENST00000508717 UBR2Q8IWV8 1755 aa17.16■□□□□ 0.34
TRIO-212ENST00000508717 GOLGA2Q08379 1002 aa17.16■□□□□ 0.34
TRIO-212ENST00000508717 SF3B2Q13435 895 aaKnown RBP17.16■□□□□ 0.34
TRIO-212ENST00000508717 TRMT2AQ8IZ69 625 aaKnown RBP17.16■□□□□ 0.34
TRIO-212ENST00000508717 TSPYL4Q9UJ04 414 aa17.16■□□□□ 0.34
TRIO-212ENST00000508717 KCPQ6ZWJ8 1503 aa17.16■□□□□ 0.34
TRIO-212ENST00000508717 LY75O60449 1722 aa17.16■□□□□ 0.34
TRIO-212ENST00000508717 SENP3-EIF4A1A0A087X0R7 540 aa17.15■□□□□ 0.34
TRIO-212ENST00000508717 BAG6P46379 1132 aa17.15■□□□□ 0.34
TRIO-212ENST00000508717 EIF4A1P60842 406 aaKnown RBP17.15■□□□□ 0.34
TRIO-212ENST00000508717 SLC39A6Q13433 755 aa17.15■□□□□ 0.34
TRIO-212ENST00000508717 TTC5Q8N0Z6 440 aa17.15■□□□□ 0.34
TRIO-212ENST00000508717 CAMKK2Q96RR4 588 aa17.15■□□□□ 0.34
TRIO-212ENST00000508717 CICQ96RK0 1608 aaPredicted RBP17.14■□□□□ 0.33
TRIO-212ENST00000508717 E9PSI1 815 aa17.14■□□□□ 0.33
TRIO-212ENST00000508717 SLC27A3Q5K4L6 730 aa17.14■□□□□ 0.33
TRIO-212ENST00000508717 PROM2Q8N271 834 aa17.14■□□□□ 0.33
TRIO-212ENST00000508717 ZNF496Q96IT1 587 aaPredicted RBP17.14■□□□□ 0.33
TRIO-212ENST00000508717 FMNL2Q96PY5 1086 aa17.14■□□□□ 0.33
TRIO-212ENST00000508717 SPINK5Q9NQ38 1064 aaPredicted RBP17.14■□□□□ 0.33
TRIO-212ENST00000508717 MBIPQ9NS73 344 aa17.14■□□□□ 0.33
TRIO-212ENST00000508717 LOC102724428A0A0B4J2F2 783 aa17.13■□□□□ 0.33
TRIO-212ENST00000508717 KCNQ3O43525 872 aa17.13■□□□□ 0.33
TRIO-212ENST00000508717 SIK1P57059 783 aa17.13■□□□□ 0.33
TRIO-212ENST00000508717 SLFN5Q08AF3 891 aa17.13■□□□□ 0.33
TRIO-212ENST00000508717 SLC4A9Q96Q91 983 aa17.13■□□□□ 0.33
TRIO-212ENST00000508717 MIS18AQ9NYP9 233 aa17.13■□□□□ 0.33
TRIO-212ENST00000508717 TXNRD1Q16881 649 aa17.12■□□□□ 0.33
TRIO-212ENST00000508717 MYH16Q9H6N6 1097 aa17.12■□□□□ 0.33
TRIO-212ENST00000508717 SOS1Q07889 1333 aaPredicted RBP17.12■□□□□ 0.33
TRIO-212ENST00000508717 HOXB7P09629 217 aa17.11■□□□□ 0.33
TRIO-212ENST00000508717 TEX13AQ9BXU3 409 aaPredicted RBP17.11■□□□□ 0.33
TRIO-212ENST00000508717 PTCD1O75127 700 aaKnown RBP17.1■□□□□ 0.33
TRIO-212ENST00000508717 GIGYF1O75420 1035 aaPredicted RBP17.1■□□□□ 0.33
TRIO-212ENST00000508717 SNRPA1P09661 255 aaKnown RBP17.1■□□□□ 0.33
TRIO-212ENST00000508717 EN1Q05925 392 aaPredicted RBP17.1■□□□□ 0.33
TRIO-212ENST00000508717 LAS1LQ9Y4W2 734 aaKnown RBP17.1■□□□□ 0.33
TRIO-212ENST00000508717 FANCIQ9NVI1 1328 aa17.1■□□□□ 0.33
TRIO-212ENST00000508717 LRRC4BQ9NT99 713 aa17.09■□□□□ 0.33
TRIO-212ENST00000508717 CCNL1Q9UK58 526 aaPredicted RBP17.09■□□□□ 0.33
TRIO-212ENST00000508717 ATP6V1AP38606 617 aa17.08■□□□□ 0.32
TRIO-212ENST00000508717 EZH2Q15910 746 aaKnown RBP17.08■□□□□ 0.32
TRIO-212ENST00000508717 DUSP27Q5VZP5 1158 aa17.08■□□□□ 0.32
TRIO-212ENST00000508717 DEFB132Q7Z7B7 95 aa17.08■□□□□ 0.32
TRIO-212ENST00000508717 CDCA7LQ96GN5 454 aa17.08■□□□□ 0.32
TRIO-212ENST00000508717 RBM42Q9BTD8 480 aaKnown RBP17.08■□□□□ 0.32
TRIO-212ENST00000508717 ITPK1Q13572 414 aa17.07■□□□□ 0.32
TRIO-212ENST00000508717 TSR2Q969E8 191 aaKnown RBP17.07■□□□□ 0.32
TRIO-212ENST00000508717 RREB1Q92766 1687 aa17.07■□□□□ 0.32
TRIO-212ENST00000508717 SOCS7O14512 581 aa17.06■□□□□ 0.32
TRIO-212ENST00000508717 RC3H1Q5TC82 1133 aaKnown RBP17.06■□□□□ 0.32
TRIO-212ENST00000508717 CHMP4AQ9BY43 222 aa17.06■□□□□ 0.32
TRIO-212ENST00000508717 TJP1Q07157 1748 aa17.05■□□□□ 0.32
TRIO-212ENST00000508717 C5P01031 1676 aa17.05■□□□□ 0.32
TRIO-212ENST00000508717 CT47B1P0C2W7 299 aaPredicted RBP17.05■□□□□ 0.32
TRIO-212ENST00000508717 C8orf58Q8NAV2 365 aa17.05■□□□□ 0.32
TRIO-212ENST00000508717 CNTNAP4Q9C0A0 1308 aa17.04■□□□□ 0.32
TRIO-212ENST00000508717 STARD3NLO95772 234 aa17.04■□□□□ 0.32
TRIO-212ENST00000508717 CYP19A1P11511 503 aaPredicted RBP17.04■□□□□ 0.32
TRIO-212ENST00000508717 DNAJC10Q8IXB1 793 aa17.04■□□□□ 0.32
TRIO-212ENST00000508717 TAF1LQ8IZX4 1826 aa17.04■□□□□ 0.32
TRIO-212ENST00000508717 COL5A3P25940 1745 aaPredicted RBP17.04■□□□□ 0.32
TRIO-212ENST00000508717 ERBB4Q15303 1308 aa17.03■□□□□ 0.32
TRIO-212ENST00000508717 EXOSC9Q06265 439 aaKnown RBP17.03■□□□□ 0.32
TRIO-212ENST00000508717 KRT24Q2M2I5 525 aa17.03■□□□□ 0.32
TRIO-212ENST00000508717 LINC00116Q8NCU8 138 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms