RNA–Protein interactions for RNA: ENST00000508657.5

KLHL3-209, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,981 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-209ENST00000508657 TIMELESSQ9UNS1 1208 aa10.56□□□□□ -0.72
KLHL3-209ENST00000508657 PHF8Q9UPP1 1060 aa10.56□□□□□ -0.72
KLHL3-209ENST00000508657 POTEJP0CG39 1038 aa10.56□□□□□ -0.72
KLHL3-209ENST00000508657 FAM193AP78312 1265 aa10.56□□□□□ -0.72
KLHL3-209ENST00000508657 NAPBQ9H115 298 aa10.56□□□□□ -0.72
KLHL3-209ENST00000508657 ZBTB21Q9ULJ3 1066 aa10.56□□□□□ -0.72
KLHL3-209ENST00000508657 ANKRD18BA2A2Z9 1011 aa10.55□□□□□ -0.72
KLHL3-209ENST00000508657 PABPN1LA6NDY0 278 aaKnown RBP10.55□□□□□ -0.72
KLHL3-209ENST00000508657 HMGB2P26583 209 aaKnown RBP10.55□□□□□ -0.72
KLHL3-209ENST00000508657 BOLA2Q9H3K6 86 aa10.55□□□□□ -0.72
KLHL3-209ENST00000508657 SNRKQ9NRH2 765 aa10.55□□□□□ -0.72
KLHL3-209ENST00000508657 GUCY1B3Q02153 619 aa10.55□□□□□ -0.72
KLHL3-209ENST00000508657 KCNH5Q8NCM2 988 aa10.55□□□□□ -0.72
KLHL3-209ENST00000508657 CDC45O75419 566 aa10.55□□□□□ -0.72
KLHL3-209ENST00000508657 HLA-DOAP06340 250 aa10.55□□□□□ -0.72
KLHL3-209ENST00000508657 MPHOSPH6Q99547 160 aaKnown RBP10.55□□□□□ -0.72
KLHL3-209ENST00000508657 LRRCC1Q9C099 1032 aa10.55□□□□□ -0.72
KLHL3-209ENST00000508657 LRRFIP2Q9Y608 721 aaKnown RBP10.55□□□□□ -0.72
KLHL3-209ENST00000508657 HIP1O00291 1037 aa10.55□□□□□ -0.72
KLHL3-209ENST00000508657 BIRC2Q13490 618 aa10.55□□□□□ -0.72
KLHL3-209ENST00000508657 TRIM5Q9C035 493 aa10.55□□□□□ -0.72
KLHL3-209ENST00000508657 GRIPAP1Q4V328 841 aa10.55□□□□□ -0.72
KLHL3-209ENST00000508657 ANKRD18AQ8IVF6 992 aa10.55□□□□□ -0.72
KLHL3-209ENST00000508657 ZNF396Q96N95 335 aaPredicted RBP10.55□□□□□ -0.72
KLHL3-209ENST00000508657 NCKAP5LQ9HCH0 1330 aa10.55□□□□□ -0.72
KLHL3-209ENST00000508657 CNTLNQ9NXG0 1405 aa10.54□□□□□ -0.72
KLHL3-209ENST00000508657 CCDC112Q8NEF3 446 aa10.54□□□□□ -0.72
KLHL3-209ENST00000508657 ADAMTS8Q9UP79 889 aa10.54□□□□□ -0.72
KLHL3-209ENST00000508657 GBP2P32456 591 aaPredicted RBP10.54□□□□□ -0.72
KLHL3-209ENST00000508657 SLF2Q8IX21 1173 aa10.54□□□□□ -0.72
KLHL3-209ENST00000508657 CCDC8Q9H0W5 538 aaPredicted RBP10.54□□□□□ -0.72
KLHL3-209ENST00000508657 MSH6P52701 1360 aa10.54□□□□□ -0.72
KLHL3-209ENST00000508657 NOP2P46087 812 aaKnown RBP10.54□□□□□ -0.72
KLHL3-209ENST00000508657 DDB1Q16531 1140 aa10.54□□□□□ -0.72
KLHL3-209ENST00000508657 CEP57L1Q8IYX8 460 aa10.54□□□□□ -0.72
KLHL3-209ENST00000508657 NBPF1Q3BBV0 1214 aa10.53□□□□□ -0.72
KLHL3-209ENST00000508657 FAM13BQ9NYF5 915 aa10.53□□□□□ -0.72
KLHL3-209ENST00000508657 IMMTQ16891 758 aaKnown RBP10.53□□□□□ -0.72
KLHL3-209ENST00000508657 EHMT1Q9H9B1 1298 aa10.53□□□□□ -0.72
KLHL3-209ENST00000508657 AXDND1Q5T1B0 1012 aaPredicted RBP10.53□□□□□ -0.72
KLHL3-209ENST00000508657 SYCP3Q8IZU3 236 aa10.53□□□□□ -0.72
KLHL3-209ENST00000508657 CCDC24Q8N4L8 307 aa10.53□□□□□ -0.72
KLHL3-209ENST00000508657 GINS2Q9Y248 185 aa10.53□□□□□ -0.72
KLHL3-209ENST00000508657 CYP46A1Q9Y6A2 500 aa10.53□□□□□ -0.72
KLHL3-209ENST00000508657 KLHL10Q6JEL2 608 aa10.53□□□□□ -0.72
KLHL3-209ENST00000508657 ATF7IPQ6VMQ6 1270 aa10.53□□□□□ -0.72
KLHL3-209ENST00000508657 ERLIN2O94905 339 aa10.52□□□□□ -0.72
KLHL3-209ENST00000508657 PPFIBP1Q86W92 1011 aa10.52□□□□□ -0.72
KLHL3-209ENST00000508657 JAKMIP1Q96N16 626 aaKnown RBP10.52□□□□□ -0.72
KLHL3-209ENST00000508657 APBA3O96018 575 aa10.52□□□□□ -0.73
KLHL3-209ENST00000508657 ARHGAP27Q6ZUM4 889 aa10.52□□□□□ -0.73
KLHL3-209ENST00000508657 TERF1P54274 439 aa10.52□□□□□ -0.73
KLHL3-209ENST00000508657 PKD2L1Q9P0L9 805 aa10.52□□□□□ -0.73
KLHL3-209ENST00000508657 BCS1LQ9Y276 419 aa10.52□□□□□ -0.73
KLHL3-209ENST00000508657 EIF5P55010 431 aaKnown RBP10.52□□□□□ -0.73
KLHL3-209ENST00000508657 OTUD6BQ8N6M0 293 aa10.52□□□□□ -0.73
KLHL3-209ENST00000508657 MAP3K12Q12852 859 aa10.52□□□□□ -0.73
KLHL3-209ENST00000508657 CTNNA2P26232 953 aa10.51□□□□□ -0.73
KLHL3-209ENST00000508657 PDE4AP27815 886 aa10.51□□□□□ -0.73
KLHL3-209ENST00000508657 TSPY2A6NKD2 308 aa10.51□□□□□ -0.73
KLHL3-209ENST00000508657 C22orf23Q9BZE7 217 aa10.51□□□□□ -0.73
KLHL3-209ENST00000508657 ZYXQ15942 572 aaKnown RBP10.51□□□□□ -0.73
KLHL3-209ENST00000508657 PPP1R42Q7Z4L9 355 aa10.51□□□□□ -0.73
KLHL3-209ENST00000508657 NME9Q86XW9 330 aa10.51□□□□□ -0.73
KLHL3-209ENST00000508657 NAIPQ13075 1403 aa10.51□□□□□ -0.73
KLHL3-209ENST00000508657 CCDC113Q9H0I3 377 aa10.51□□□□□ -0.73
KLHL3-209ENST00000508657 PPP1R12BO60237 982 aaPredicted RBP10.51□□□□□ -0.73
KLHL3-209ENST00000508657 ERBINQ96RT1 1412 aa10.51□□□□□ -0.73
KLHL3-209ENST00000508657 CNGA1P29973 690 aa10.51□□□□□ -0.73
KLHL3-209ENST00000508657 SIRT1Q96EB6 747 aa10.51□□□□□ -0.73
KLHL3-209ENST00000508657 SSX2IPQ9Y2D8 614 aa10.51□□□□□ -0.73
KLHL3-209ENST00000508657 A0A087WZG4 1122 aa10.5□□□□□ -0.73
KLHL3-209ENST00000508657 AKAP2Q9Y2D5 859 aa10.5□□□□□ -0.73
KLHL3-209ENST00000508657 SMARCA5O60264 1052 aaPredicted RBP10.5□□□□□ -0.73
KLHL3-209ENST00000508657 HSP90B2PQ58FF3 399 aa10.5□□□□□ -0.73
KLHL3-209ENST00000508657 TCERG1LQ5VWI1 586 aa10.5□□□□□ -0.73
KLHL3-209ENST00000508657 CDC5LQ99459 802 aaKnown RBP10.5□□□□□ -0.73
KLHL3-209ENST00000508657 NSFL1CQ9UNZ2 370 aaKnown RBP10.5□□□□□ -0.73
KLHL3-209ENST00000508657 NIP7Q9Y221 180 aaKnown RBP eCLIP10.5□□□□□ -0.73
KLHL3-209ENST00000508657 EXOC6BQ9Y2D4 811 aa10.5□□□□□ -0.73
KLHL3-209ENST00000508657 UQCRHLA0A096LP55 91 aa10.5□□□□□ -0.73
KLHL3-209ENST00000508657 CTCFLQ8NI51 663 aaPredicted RBP10.5□□□□□ -0.73
KLHL3-209ENST00000508657 IPO9Q96P70 1041 aaKnown RBP10.5□□□□□ -0.73
KLHL3-209ENST00000508657 LARP6Q9BRS8 491 aaKnown RBP10.5□□□□□ -0.73
KLHL3-209ENST00000508657 EPB41L2O43491 1005 aaKnown RBP10.5□□□□□ -0.73
KLHL3-209ENST00000508657 LMAN1P49257 510 aa10.5□□□□□ -0.73
KLHL3-209ENST00000508657 CCT4P50991 539 aaKnown RBP10.5□□□□□ -0.73
KLHL3-209ENST00000508657 STX8Q9UNK0 236 aa10.5□□□□□ -0.73
KLHL3-209ENST00000508657 RTCBQ9Y3I0 505 aaKnown RBP10.5□□□□□ -0.73
KLHL3-209ENST00000508657 ANXA1P04083 346 aa10.49□□□□□ -0.73
KLHL3-209ENST00000508657 LDHAL6AQ6ZMR3 332 aa10.49□□□□□ -0.73
KLHL3-209ENST00000508657 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.49□□□□□ -0.73
KLHL3-209ENST00000508657 UTP14AQ9BVJ6 771 aaKnown RBP10.49□□□□□ -0.73
KLHL3-209ENST00000508657 STK25O00506 426 aa10.49□□□□□ -0.73
KLHL3-209ENST00000508657 GNPATO15228 680 aa10.49□□□□□ -0.73
KLHL3-209ENST00000508657 FAM98CQ17RN3 349 aaKnown RBP10.49□□□□□ -0.73
KLHL3-209ENST00000508657 ZNF710Q8N1W2 664 aa10.49□□□□□ -0.73
KLHL3-209ENST00000508657 HAND2P61296 217 aa10.49□□□□□ -0.73
KLHL3-209ENST00000508657 FNBP4Q8N3X1 1017 aaPredicted RBP10.49□□□□□ -0.73
KLHL3-209ENST00000508657 ANKRD24Q8TF21 1146 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms