RNA–Protein interactions for RNA: ENST00000508642.1

SPOCK1-205, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 499 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-205ENST00000508642 LGR6Q9HBX8 967 aa9.43□□□□□ -0.9
SPOCK1-205ENST00000508642 RRP7AQ9Y3A4 280 aaKnown RBP9.43□□□□□ -0.9
SPOCK1-205ENST00000508642 TUBGCP6Q96RT7 1819 aa9.42□□□□□ -0.9
SPOCK1-205ENST00000508642 PRIM1P49642 420 aaKnown RBP9.42□□□□□ -0.9
SPOCK1-205ENST00000508642 NEUROD2Q15784 382 aa9.42□□□□□ -0.9
SPOCK1-205ENST00000508642 NGEFQ8N5V2 710 aa9.42□□□□□ -0.9
SPOCK1-205ENST00000508642 IL17REQ8NFR9 667 aa9.42□□□□□ -0.9
SPOCK1-205ENST00000508642 ACSBG1Q96GR2 724 aa9.42□□□□□ -0.9
SPOCK1-205ENST00000508642 BCL11BQ9C0K0 894 aaPredicted RBP9.42□□□□□ -0.9
SPOCK1-205ENST00000508642 TRIM35Q9UPQ4 493 aa9.42□□□□□ -0.9
SPOCK1-205ENST00000508642 QSER1Q2KHR3 1735 aa9.42□□□□□ -0.9
SPOCK1-205ENST00000508642 MYH14Q7Z406 1995 aaKnown RBP9.41□□□□□ -0.9
SPOCK1-205ENST00000508642 KCNQ2O43526 872 aa9.41□□□□□ -0.9
SPOCK1-205ENST00000508642 TRIM37O94972 964 aa9.41□□□□□ -0.9
SPOCK1-205ENST00000508642 CABP4P57796 275 aa9.41□□□□□ -0.9
SPOCK1-205ENST00000508642 CCDC27Q2M243 656 aa9.41□□□□□ -0.9
SPOCK1-205ENST00000508642 MCM10Q7L590 875 aa9.41□□□□□ -0.9
SPOCK1-205ENST00000508642 SYTL4Q96C24 671 aaPredicted RBP9.41□□□□□ -0.9
SPOCK1-205ENST00000508642 SLC52A2Q9HAB3 445 aa9.41□□□□□ -0.9
SPOCK1-205ENST00000508642 TMOD3Q9NYL9 352 aa9.41□□□□□ -0.9
SPOCK1-205ENST00000508642 KCPQ6ZWJ8 1503 aa9.41□□□□□ -0.9
SPOCK1-205ENST00000508642 TEFQ10587 303 aa9.4□□□□□ -0.9
SPOCK1-205ENST00000508642 DCTN1Q14203 1278 aa9.4□□□□□ -0.9
SPOCK1-205ENST00000508642 CCDC125Q86Z20 511 aa9.4□□□□□ -0.9
SPOCK1-205ENST00000508642 NFATC2IPQ8NCF5 419 aa9.4□□□□□ -0.9
SPOCK1-205ENST00000508642 UBR3Q6ZT12 1888 aa9.4□□□□□ -0.91
SPOCK1-205ENST00000508642 PTF1AQ7RTS3 328 aa9.39□□□□□ -0.91
SPOCK1-205ENST00000508642 PIGBQ92521 554 aa9.39□□□□□ -0.91
SPOCK1-205ENST00000508642 THUMPD2Q9BTF0 503 aaKnown RBP9.39□□□□□ -0.91
SPOCK1-205ENST00000508642 SENP3-EIF4A1A0A087X0R7 540 aa9.38□□□□□ -0.91
SPOCK1-205ENST00000508642 CALD1Q05682 793 aaKnown RBP9.38□□□□□ -0.91
SPOCK1-205ENST00000508642 TAF7Q15545 349 aaPredicted RBP9.38□□□□□ -0.91
SPOCK1-205ENST00000508642 PPP4R3CPQ6ZMV5 832 aa9.38□□□□□ -0.91
SPOCK1-205ENST00000508642 WWC1Q8IX03 1113 aa9.38□□□□□ -0.91
SPOCK1-205ENST00000508642 UPF1Q92900 1129 aaKnown RBP eCLIP9.38□□□□□ -0.91
SPOCK1-205ENST00000508642 C4BP0C0L5 1744 aa9.38□□□□□ -0.91
SPOCK1-205ENST00000508642 ZNF521Q96K83 1311 aa9.37□□□□□ -0.91
SPOCK1-205ENST00000508642 PLSCR1O15162 318 aa9.37□□□□□ -0.91
SPOCK1-205ENST00000508642 APBA3O96018 575 aa9.37□□□□□ -0.91
SPOCK1-205ENST00000508642 SF3B2Q13435 895 aaKnown RBP9.37□□□□□ -0.91
SPOCK1-205ENST00000508642 SMARCC1Q92922 1105 aaPredicted RBP9.37□□□□□ -0.91
SPOCK1-205ENST00000508642 ATG3Q9NT62 314 aa9.37□□□□□ -0.91
SPOCK1-205ENST00000508642 BABAM1Q9NWV8 329 aa9.37□□□□□ -0.91
SPOCK1-205ENST00000508642 ASAP1Q9ULH1 1129 aa9.37□□□□□ -0.91
SPOCK1-205ENST00000508642 SALL2Q9Y467 1007 aaPredicted RBP9.37□□□□□ -0.91
SPOCK1-205ENST00000508642 PALLDQ8WX93 1383 aa9.37□□□□□ -0.91
SPOCK1-205ENST00000508642 C4AP0C0L4 1744 aa9.36□□□□□ -0.91
SPOCK1-205ENST00000508642 IL16Q14005 1332 aa9.36□□□□□ -0.91
SPOCK1-205ENST00000508642 BTBD11A6QL63 1104 aa9.36□□□□□ -0.91
SPOCK1-205ENST00000508642 HNRNPUQ00839 825 aaKnown RBP eCLIP9.36□□□□□ -0.91
SPOCK1-205ENST00000508642 ZNF790Q6PG37 636 aa9.36□□□□□ -0.91
SPOCK1-205ENST00000508642 WDR63Q8IWG1 891 aa9.36□□□□□ -0.91
SPOCK1-205ENST00000508642 ZNF853P0CG23 659 aa9.35□□□□□ -0.91
SPOCK1-205ENST00000508642 BAG6P46379 1132 aa9.35□□□□□ -0.91
SPOCK1-205ENST00000508642 SLC39A6Q13433 755 aa9.35□□□□□ -0.91
SPOCK1-205ENST00000508642 CFAP44Q96MT7 982 aa9.35□□□□□ -0.91
SPOCK1-205ENST00000508642 IFT57Q9NWB7 429 aa9.35□□□□□ -0.91
SPOCK1-205ENST00000508642 CHL1O00533 1208 aa9.34□□□□□ -0.91
SPOCK1-205ENST00000508642 GNAI1P63096 354 aa9.34□□□□□ -0.91
SPOCK1-205ENST00000508642 TTC5Q8N0Z6 440 aa9.34□□□□□ -0.91
SPOCK1-205ENST00000508642 MIS18AQ9NYP9 233 aa9.34□□□□□ -0.91
SPOCK1-205ENST00000508642 TSPYL4Q9UJ04 414 aa9.34□□□□□ -0.91
SPOCK1-205ENST00000508642 ZBED9Q6R2W3 1325 aa9.33□□□□□ -0.92
SPOCK1-205ENST00000508642 NUP98P52948 1817 aa9.33□□□□□ -0.92
SPOCK1-205ENST00000508642 BCORQ6W2J9 1755 aa9.33□□□□□ -0.92
SPOCK1-205ENST00000508642 EN1Q05925 392 aaPredicted RBP9.33□□□□□ -0.92
SPOCK1-205ENST00000508642 SLC27A3Q5K4L6 730 aa9.33□□□□□ -0.92
SPOCK1-205ENST00000508642 CAMKK2Q96RR4 588 aa9.33□□□□□ -0.92
SPOCK1-205ENST00000508642 LAS1LQ9Y4W2 734 aaKnown RBP9.33□□□□□ -0.92
SPOCK1-205ENST00000508642 HEG1Q9ULI3 1381 aa9.33□□□□□ -0.92
SPOCK1-205ENST00000508642 ANKRD36CQ5JPF3 1778 aa9.32□□□□□ -0.92
SPOCK1-205ENST00000508642 LOC102724428A0A0B4J2F2 783 aa9.32□□□□□ -0.92
SPOCK1-205ENST00000508642 KCNQ3O43525 872 aa9.32□□□□□ -0.92
SPOCK1-205ENST00000508642 PTCD1O75127 700 aaKnown RBP9.32□□□□□ -0.92
SPOCK1-205ENST00000508642 SIK1P57059 783 aa9.32□□□□□ -0.92
SPOCK1-205ENST00000508642 GOLGA2Q08379 1002 aa9.32□□□□□ -0.92
SPOCK1-205ENST00000508642 EZH2Q15910 746 aaKnown RBP9.32□□□□□ -0.92
SPOCK1-205ENST00000508642 TXNRD1Q16881 649 aa9.32□□□□□ -0.92
SPOCK1-205ENST00000508642 DEFB132Q7Z7B7 95 aa9.32□□□□□ -0.92
SPOCK1-205ENST00000508642 VSIG10Q8N0Z9 540 aa9.32□□□□□ -0.92
SPOCK1-205ENST00000508642 PROM2Q8N271 834 aa9.32□□□□□ -0.92
SPOCK1-205ENST00000508642 ZNF496Q96IT1 587 aaPredicted RBP9.32□□□□□ -0.92
SPOCK1-205ENST00000508642 FMNL2Q96PY5 1086 aa9.32□□□□□ -0.92
SPOCK1-205ENST00000508642 RBM42Q9BTD8 480 aaKnown RBP9.32□□□□□ -0.92
SPOCK1-205ENST00000508642 MBIPQ9NS73 344 aa9.32□□□□□ -0.92
SPOCK1-205ENST00000508642 E9PSI1 815 aa9.31□□□□□ -0.92
SPOCK1-205ENST00000508642 HMGB2P26583 209 aaKnown RBP9.31□□□□□ -0.92
SPOCK1-205ENST00000508642 EIF4A1P60842 406 aaKnown RBP9.31□□□□□ -0.92
SPOCK1-205ENST00000508642 SLC4A9Q96Q91 983 aa9.31□□□□□ -0.92
SPOCK1-205ENST00000508642 SPINK5Q9NQ38 1064 aaPredicted RBP9.31□□□□□ -0.92
SPOCK1-205ENST00000508642 LRRC4BQ9NT99 713 aa9.31□□□□□ -0.92
SPOCK1-205ENST00000508642 CCNL1Q9UK58 526 aaPredicted RBP9.31□□□□□ -0.92
SPOCK1-205ENST00000508642 CASZ1Q86V15 1759 aa9.31□□□□□ -0.92
SPOCK1-205ENST00000508642 ARFGEF2Q9Y6D5 1785 aa9.31□□□□□ -0.92
SPOCK1-205ENST00000508642 COL24A1Q17RW2 1714 aa9.31□□□□□ -0.92
SPOCK1-205ENST00000508642 FANCIQ9NVI1 1328 aa9.31□□□□□ -0.92
SPOCK1-205ENST00000508642 SCN7AQ01118 1682 aa9.3□□□□□ -0.92
SPOCK1-205ENST00000508642 ATP6V1AP38606 617 aa9.3□□□□□ -0.92
SPOCK1-205ENST00000508642 SLFN5Q08AF3 891 aa9.3□□□□□ -0.92
SPOCK1-205ENST00000508642 ITPK1Q13572 414 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms