RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 EXOC5O00471 708 aa11.39□□□□□ -0.59
USP46-207ENST00000508499 LMOD3Q0VAK6 560 aa11.39□□□□□ -0.59
USP46-207ENST00000508499 DDB1Q16531 1140 aa11.39□□□□□ -0.59
USP46-207ENST00000508499 IFNL2Q8IZJ0 200 aa11.39□□□□□ -0.59
USP46-207ENST00000508499 USP35Q9P2H5 1018 aa11.39□□□□□ -0.59
USP46-207ENST00000508499 CCDC9Q9Y3X0 531 aaKnown RBP11.39□□□□□ -0.59
USP46-207ENST00000508499 DOT1LQ8TEK3 1739 aa11.39□□□□□ -0.59
USP46-207ENST00000508499 ZNF521Q96K83 1311 aa11.38□□□□□ -0.59
USP46-207ENST00000508499 GNAT3A8MTJ3 354 aa11.38□□□□□ -0.59
USP46-207ENST00000508499 APAF1O14727 1248 aa11.38□□□□□ -0.59
USP46-207ENST00000508499 CYP27B1O15528 508 aa11.38□□□□□ -0.59
USP46-207ENST00000508499 PHKG2P15735 406 aa11.38□□□□□ -0.59
USP46-207ENST00000508499 RXRBP28702 533 aa11.38□□□□□ -0.59
USP46-207ENST00000508499 FAM98CQ17RN3 349 aaKnown RBP11.38□□□□□ -0.59
USP46-207ENST00000508499 NHSQ6T4R5 1651 aa11.38□□□□□ -0.59
USP46-207ENST00000508499 PAPPAQ13219 1627 aa11.38□□□□□ -0.59
USP46-207ENST00000508499 POTEAQ6S8J7 498 aa11.37□□□□□ -0.59
USP46-207ENST00000508499 CCDC146Q8IYE0 955 aa11.37□□□□□ -0.59
USP46-207ENST00000508499 DCAF5Q96JK2 942 aa11.37□□□□□ -0.59
USP46-207ENST00000508499 KDM3BQ7LBC6 1761 aa11.37□□□□□ -0.59
USP46-207ENST00000508499 RGS12O14924 1447 aa11.37□□□□□ -0.59
USP46-207ENST00000508499 KDM6AO15550 1401 aaPredicted RBP11.37□□□□□ -0.59
USP46-207ENST00000508499 ZNF831Q5JPB2 1677 aa11.37□□□□□ -0.59
USP46-207ENST00000508499 ZBED9Q6R2W3 1325 aa11.36□□□□□ -0.59
USP46-207ENST00000508499 C1orf141Q5JVX7 400 aa11.36□□□□□ -0.59
USP46-207ENST00000508499 ZNF530Q6P9A1 599 aaPredicted RBP11.36□□□□□ -0.59
USP46-207ENST00000508499 TRIM35Q9UPQ4 493 aa11.36□□□□□ -0.59
USP46-207ENST00000508499 UBR2Q8IWV8 1755 aa11.36□□□□□ -0.59
USP46-207ENST00000508499 CICQ96RK0 1608 aaPredicted RBP11.36□□□□□ -0.59
USP46-207ENST00000508499 IL16Q14005 1332 aa11.36□□□□□ -0.59
USP46-207ENST00000508499 RIPK4P57078 832 aa11.35□□□□□ -0.59
USP46-207ENST00000508499 WDR63Q8IWG1 891 aa11.35□□□□□ -0.59
USP46-207ENST00000508499 SEPT12Q8IYM1 358 aa11.35□□□□□ -0.59
USP46-207ENST00000508499 ZNF579Q8NAF0 562 aaKnown RBP11.35□□□□□ -0.59
USP46-207ENST00000508499 BABAM1Q9NWV8 329 aa11.35□□□□□ -0.59
USP46-207ENST00000508499 RGPD3A6NKT7 1758 aaPredicted RBP11.35□□□□□ -0.59
USP46-207ENST00000508499 RGPD4Q7Z3J3 1758 aa11.35□□□□□ -0.59
USP46-207ENST00000508499 ERVV-2B6SEH9 535 aa11.35□□□□□ -0.59
USP46-207ENST00000508499 CALD1Q05682 793 aaKnown RBP11.35□□□□□ -0.59
USP46-207ENST00000508499 WWC1Q8IX03 1113 aa11.35□□□□□ -0.59
USP46-207ENST00000508499 MARCH10Q8NA82 808 aaPredicted RBP11.34□□□□□ -0.59
USP46-207ENST00000508499 PDE3BQ13370 1112 aa11.33□□□□□ -0.6
USP46-207ENST00000508499 FKBP8Q14318 412 aa11.33□□□□□ -0.6
USP46-207ENST00000508499 IL17REQ8NFR9 667 aa11.33□□□□□ -0.6
USP46-207ENST00000508499 RTF1Q92541 710 aaKnown RBP11.33□□□□□ -0.6
USP46-207ENST00000508499 BTAF1O14981 1849 aa11.32□□□□□ -0.6
USP46-207ENST00000508499 RNMTO43148 476 aaKnown RBP11.32□□□□□ -0.6
USP46-207ENST00000508499 KRT27Q7Z3Y8 459 aa11.32□□□□□ -0.6
USP46-207ENST00000508499 LY75O60449 1722 aa11.32□□□□□ -0.6
USP46-207ENST00000508499 TNS1Q9HBL0 1735 aaKnown RBP11.32□□□□□ -0.6
USP46-207ENST00000508499 ZNF853P0CG23 659 aa11.31□□□□□ -0.6
USP46-207ENST00000508499 HNRNPUQ00839 825 aaKnown RBP eCLIP11.31□□□□□ -0.6
USP46-207ENST00000508499 FAM196AQ6ZSG2 479 aa11.3□□□□□ -0.6
USP46-207ENST00000508499 TRMT2AQ8IZ69 625 aaKnown RBP11.3□□□□□ -0.6
USP46-207ENST00000508499 DDX54Q8TDD1 881 aaKnown RBP11.3□□□□□ -0.6
USP46-207ENST00000508499 CFAP44Q96MT7 982 aa11.3□□□□□ -0.6
USP46-207ENST00000508499 SLC52A2Q9HAB3 445 aa11.3□□□□□ -0.6
USP46-207ENST00000508499 IFT57Q9NWB7 429 aa11.3□□□□□ -0.6
USP46-207ENST00000508499 RRP7AQ9Y3A4 280 aaKnown RBP11.3□□□□□ -0.6
USP46-207ENST00000508499 CACNA1FO60840 1977 aa11.3□□□□□ -0.6
USP46-207ENST00000508499 TAF7Q15545 349 aaPredicted RBP11.29□□□□□ -0.6
USP46-207ENST00000508499 MPRIPQ6WCQ1 1025 aa11.29□□□□□ -0.6
USP46-207ENST00000508499 OTUD5Q96G74 571 aa11.29□□□□□ -0.6
USP46-207ENST00000508499 LGR6Q9HBX8 967 aa11.29□□□□□ -0.6
USP46-207ENST00000508499 EP400Q96L91 3159 aa11.29□□□□□ -0.6
USP46-207ENST00000508499 KAT6BQ8WYB5 2073 aa11.29□□□□□ -0.6
USP46-207ENST00000508499 LAMB4A4D0S4 1761 aa11.29□□□□□ -0.6
USP46-207ENST00000508499 CHL1O00533 1208 aa11.28□□□□□ -0.6
USP46-207ENST00000508499 GNAI1P63096 354 aa11.28□□□□□ -0.6
USP46-207ENST00000508499 GOLGA2Q08379 1002 aa11.28□□□□□ -0.6
USP46-207ENST00000508499 NEUROD2Q15784 382 aa11.28□□□□□ -0.6
USP46-207ENST00000508499 MCM10Q7L590 875 aa11.28□□□□□ -0.6
USP46-207ENST00000508499 SOS1Q07889 1333 aaPredicted RBP11.28□□□□□ -0.6
USP46-207ENST00000508499 HEG1Q9ULI3 1381 aa11.28□□□□□ -0.6
USP46-207ENST00000508499 E9PSI1 815 aa11.27□□□□□ -0.6
USP46-207ENST00000508499 TEFQ10587 303 aa11.27□□□□□ -0.6
USP46-207ENST00000508499 KCPQ6ZWJ8 1503 aa11.27□□□□□ -0.61
USP46-207ENST00000508499 A0A0G2JS52 829 aa11.26□□□□□ -0.61
USP46-207ENST00000508499 CABP4P57796 275 aa11.26□□□□□ -0.61
USP46-207ENST00000508499 MYT1Q01538 1121 aa11.26□□□□□ -0.61
USP46-207ENST00000508499 SLFN5Q08AF3 891 aa11.26□□□□□ -0.61
USP46-207ENST00000508499 DCTN1Q14203 1278 aa11.26□□□□□ -0.61
USP46-207ENST00000508499 NFATC2IPQ8NCF5 419 aa11.26□□□□□ -0.61
USP46-207ENST00000508499 TAF1LQ8IZX4 1826 aa11.26□□□□□ -0.61
USP46-207ENST00000508499 COL5A3P25940 1745 aaPredicted RBP11.26□□□□□ -0.61
USP46-207ENST00000508499 POTEMA6NI47 508 aa11.26□□□□□ -0.61
USP46-207ENST00000508499 SPDYE4A6NLX3 237 aa11.26□□□□□ -0.61
USP46-207ENST00000508499 BCL11BQ9C0K0 894 aaPredicted RBP11.26□□□□□ -0.61
USP46-207ENST00000508499 MYH16Q9H6N6 1097 aa11.26□□□□□ -0.61
USP46-207ENST00000508499 TMOD3Q9NYL9 352 aa11.26□□□□□ -0.61
USP46-207ENST00000508499 ZNF790Q6PG37 636 aa11.25□□□□□ -0.61
USP46-207ENST00000508499 PIGBQ92521 554 aa11.25□□□□□ -0.61
USP46-207ENST00000508499 THUMPD2Q9BTF0 503 aaKnown RBP11.25□□□□□ -0.61
USP46-207ENST00000508499 RREB1Q92766 1687 aa11.24□□□□□ -0.61
USP46-207ENST00000508499 TJP1Q07157 1748 aa11.24□□□□□ -0.61
USP46-207ENST00000508499 BTBD11A6QL63 1104 aa11.24□□□□□ -0.61
USP46-207ENST00000508499 HOXB7P09629 217 aa11.24□□□□□ -0.61
USP46-207ENST00000508499 CT47B1P0C2W7 299 aaPredicted RBP11.24□□□□□ -0.61
USP46-207ENST00000508499 HMGB2P26583 209 aaKnown RBP11.24□□□□□ -0.61
USP46-207ENST00000508499 PRIM1P49642 420 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms