RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 MTHFSDQ2M296 383 aaKnown RBP12.58□□□□□ -0.4
DDX41-209ENST00000508279 AKAP4Q5JQC9 854 aa12.58□□□□□ -0.4
DDX41-209ENST00000508279 ATG3Q9NT62 314 aa12.58□□□□□ -0.4
DDX41-209ENST00000508279 PNPLA7Q6ZV29 1317 aa12.58□□□□□ -0.4
DDX41-209ENST00000508279 C4BP0C0L5 1744 aa12.57□□□□□ -0.4
DDX41-209ENST00000508279 PHF14O94880 888 aa12.57□□□□□ -0.4
DDX41-209ENST00000508279 NFATC2IPQ8NCF5 419 aa12.57□□□□□ -0.4
DDX41-209ENST00000508279 AK7Q96M32 723 aa12.57□□□□□ -0.4
DDX41-209ENST00000508279 MTFR1LQ9H019 292 aa12.57□□□□□ -0.4
DDX41-209ENST00000508279 LGR6Q9HBX8 967 aa12.57□□□□□ -0.4
DDX41-209ENST00000508279 PRKAR2BP31323 418 aa12.56□□□□□ -0.4
DDX41-209ENST00000508279 SMIM5Q71RC9 77 aa12.56□□□□□ -0.4
DDX41-209ENST00000508279 KLHL34Q8N239 644 aa12.56□□□□□ -0.4
DDX41-209ENST00000508279 RNMTO43148 476 aaKnown RBP12.55□□□□□ -0.4
DDX41-209ENST00000508279 PTCD1O75127 700 aaKnown RBP12.55□□□□□ -0.4
DDX41-209ENST00000508279 COL23A1Q86Y22 540 aaPredicted RBP12.55□□□□□ -0.4
DDX41-209ENST00000508279 LINC00116Q8NCU8 138 aa12.55□□□□□ -0.4
DDX41-209ENST00000508279 HMGB2P26583 209 aaKnown RBP12.54□□□□□ -0.4
DDX41-209ENST00000508279 PTGER2P43116 358 aa12.54□□□□□ -0.4
DDX41-209ENST00000508279 ITPK1Q13572 414 aa12.54□□□□□ -0.4
DDX41-209ENST00000508279 MSL1Q68DK7 614 aa12.54□□□□□ -0.4
DDX41-209ENST00000508279 GAS2L2Q8NHY3 880 aa12.54□□□□□ -0.4
DDX41-209ENST00000508279 UBR3Q6ZT12 1888 aa12.54□□□□□ -0.4
DDX41-209ENST00000508279 GNPATO15228 680 aa12.53□□□□□ -0.4
DDX41-209ENST00000508279 POLD1P28340 1107 aa12.53□□□□□ -0.4
DDX41-209ENST00000508279 RSPH6AQ9H0K4 717 aa12.53□□□□□ -0.4
DDX41-209ENST00000508279 SLC52A2Q9HAB3 445 aa12.53□□□□□ -0.4
DDX41-209ENST00000508279 GNAT3A8MTJ3 354 aa12.52□□□□□ -0.41
DDX41-209ENST00000508279 SLC39A6Q13433 755 aa12.52□□□□□ -0.41
DDX41-209ENST00000508279 SLC16A10Q8TF71 515 aa12.52□□□□□ -0.41
DDX41-209ENST00000508279 PHACTR3Q96KR7 559 aa12.52□□□□□ -0.41
DDX41-209ENST00000508279 ARXQ96QS3 562 aa12.52□□□□□ -0.41
DDX41-209ENST00000508279 MAP3K5Q99683 1374 aa12.52□□□□□ -0.41
DDX41-209ENST00000508279 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.51□□□□□ -0.41
DDX41-209ENST00000508279 RALBP1Q15311 655 aa12.51□□□□□ -0.41
DDX41-209ENST00000508279 AMIGO3Q86WK7 504 aa12.51□□□□□ -0.41
DDX41-209ENST00000508279 SLC4A9Q96Q91 983 aa12.51□□□□□ -0.41
DDX41-209ENST00000508279 FHDC1Q9C0D6 1143 aaPredicted RBP12.51□□□□□ -0.41
DDX41-209ENST00000508279 NEFMP07197 916 aa12.5□□□□□ -0.41
DDX41-209ENST00000508279 TEFQ10587 303 aa12.5□□□□□ -0.41
DDX41-209ENST00000508279 FLAD1Q8NFF5 587 aa12.5□□□□□ -0.41
DDX41-209ENST00000508279 COL5A3P25940 1745 aaPredicted RBP12.5□□□□□ -0.41
DDX41-209ENST00000508279 MYH14Q7Z406 1995 aaKnown RBP12.5□□□□□ -0.41
DDX41-209ENST00000508279 DLG5Q8TDM6 1919 aa12.49□□□□□ -0.41
DDX41-209ENST00000508279 DCAF8L1A6NGE4 600 aa12.49□□□□□ -0.41
DDX41-209ENST00000508279 FCHSD2O94868 740 aa12.49□□□□□ -0.41
DDX41-209ENST00000508279 SGIP1Q9BQI5 828 aa12.49□□□□□ -0.41
DDX41-209ENST00000508279 RTCBQ9Y3I0 505 aaKnown RBP12.49□□□□□ -0.41
DDX41-209ENST00000508279 TJP1Q07157 1748 aa12.48□□□□□ -0.41
DDX41-209ENST00000508279 ZNF831Q5JPB2 1677 aa12.48□□□□□ -0.41
DDX41-209ENST00000508279 ADAMTS7Q9UKP4 1686 aa12.48□□□□□ -0.41
DDX41-209ENST00000508279 MRC1P22897 1456 aa12.48□□□□□ -0.41
DDX41-209ENST00000508279 SSFA2P28290 1259 aa12.48□□□□□ -0.41
DDX41-209ENST00000508279 TTC5Q8N0Z6 440 aa12.48□□□□□ -0.41
DDX41-209ENST00000508279 IL17REQ8NFR9 667 aa12.48□□□□□ -0.41
DDX41-209ENST00000508279 RTF1Q92541 710 aaKnown RBP12.48□□□□□ -0.41
DDX41-209ENST00000508279 MYBBP1AQ9BQG0 1328 aaKnown RBP12.47□□□□□ -0.41
DDX41-209ENST00000508279 DCTN1Q14203 1278 aa12.47□□□□□ -0.41
DDX41-209ENST00000508279 TRAPPC3LQ5T215 181 aa12.47□□□□□ -0.41
DDX41-209ENST00000508279 MCM10Q7L590 875 aa12.47□□□□□ -0.41
DDX41-209ENST00000508279 DNAJC10Q8IXB1 793 aa12.47□□□□□ -0.41
DDX41-209ENST00000508279 SYT17Q9BSW7 474 aa12.47□□□□□ -0.41
DDX41-209ENST00000508279 SIPA1L3O60292 1781 aaPredicted RBP12.47□□□□□ -0.41
DDX41-209ENST00000508279 COL24A1Q17RW2 1714 aa12.47□□□□□ -0.41
DDX41-209ENST00000508279 MAPK8IP3Q9UPT6 1336 aa12.46□□□□□ -0.41
DDX41-209ENST00000508279 CRKLP46109 303 aaKnown RBP12.46□□□□□ -0.41
DDX41-209ENST00000508279 CNTNAP4Q9C0A0 1308 aa12.45□□□□□ -0.42
DDX41-209ENST00000508279 RFC4P35249 363 aa12.45□□□□□ -0.42
DDX41-209ENST00000508279 RC3H1Q5TC82 1133 aaKnown RBP12.45□□□□□ -0.42
DDX41-209ENST00000508279 PELP1Q8IZL8 1130 aaKnown RBP12.45□□□□□ -0.42
DDX41-209ENST00000508279 UBR2Q8IWV8 1755 aa12.44□□□□□ -0.42
DDX41-209ENST00000508279 KCPQ6ZWJ8 1503 aa12.44□□□□□ -0.42
DDX41-209ENST00000508279 BTBD11A6QL63 1104 aa12.44□□□□□ -0.42
DDX41-209ENST00000508279 RPS6KA4O75676 772 aa12.44□□□□□ -0.42
DDX41-209ENST00000508279 ARHGEF1Q92888 912 aaKnown RBP12.44□□□□□ -0.42
DDX41-209ENST00000508279 PNNQ9H307 717 aaKnown RBP12.44□□□□□ -0.42
DDX41-209ENST00000508279 C4AP0C0L4 1744 aa12.44□□□□□ -0.42
DDX41-209ENST00000508279 ZNF316A6NFI3 1004 aaPredicted RBP12.43□□□□□ -0.42
DDX41-209ENST00000508279 KCNQ3O43525 872 aa12.43□□□□□ -0.42
DDX41-209ENST00000508279 WDR43Q15061 677 aaKnown RBP eCLIP12.43□□□□□ -0.42
DDX41-209ENST00000508279 ZNF790Q6PG37 636 aa12.43□□□□□ -0.42
DDX41-209ENST00000508279 PRKRIP1Q9H875 184 aaPredicted RBP12.43□□□□□ -0.42
DDX41-209ENST00000508279 CCDC87Q9NVE4 849 aa12.43□□□□□ -0.42
DDX41-209ENST00000508279 CCDC146Q8IYE0 955 aa12.42□□□□□ -0.42
DDX41-209ENST00000508279 NLGN2Q8NFZ4 835 aa12.42□□□□□ -0.42
DDX41-209ENST00000508279 ZNF496Q96IT1 587 aaPredicted RBP12.42□□□□□ -0.42
DDX41-209ENST00000508279 PLEKHF1Q96S99 279 aa12.42□□□□□ -0.42
DDX41-209ENST00000508279 ZNF330Q9Y3S2 320 aaPredicted RBP12.42□□□□□ -0.42
DDX41-209ENST00000508279 CEMIPQ8WUJ3 1361 aa12.42□□□□□ -0.42
DDX41-209ENST00000508279 CICQ96RK0 1608 aaPredicted RBP12.41□□□□□ -0.42
DDX41-209ENST00000508279 CYP19A1P11511 503 aaPredicted RBP12.41□□□□□ -0.42
DDX41-209ENST00000508279 CANXP27824 592 aaKnown RBP12.41□□□□□ -0.42
DDX41-209ENST00000508279 NFE2L2Q16236 605 aa12.41□□□□□ -0.42
DDX41-209ENST00000508279 GPR162Q16538 588 aa12.41□□□□□ -0.42
DDX41-209ENST00000508279 INTS5Q6P9B9 1019 aaKnown RBP12.41□□□□□ -0.42
DDX41-209ENST00000508279 FMNL2Q96PY5 1086 aa12.41□□□□□ -0.42
DDX41-209ENST00000508279 THUMPD2Q9BTF0 503 aaKnown RBP12.41□□□□□ -0.42
DDX41-209ENST00000508279 MIS18AQ9NYP9 233 aa12.41□□□□□ -0.42
DDX41-209ENST00000508279 SRP68Q9UHB9 627 aaKnown RBP12.41□□□□□ -0.42
DDX41-209ENST00000508279 STARD3NLO95772 234 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms