RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 RGS22Q8NE09 1264 aa3.26□□□□□ -1.89
SMN2-208ENST00000508258 GAS2L1Q99501 681 aaPredicted RBP3.26□□□□□ -1.89
SMN2-208ENST00000508258 COL25A1Q9BXS0 654 aaPredicted RBP3.26□□□□□ -1.89
SMN2-208ENST00000508258 GZF1Q9H116 711 aaPredicted RBP3.26□□□□□ -1.89
SMN2-208ENST00000508258 DOLKQ9UPQ8 538 aa3.26□□□□□ -1.89
SMN2-208ENST00000508258 CARNS1A5YM72 827 aa3.25□□□□□ -1.89
SMN2-208ENST00000508258 RANGAP1P46060 587 aaPredicted RBP3.25□□□□□ -1.89
SMN2-208ENST00000508258 RNF144AP50876 292 aaPredicted RBP3.25□□□□□ -1.89
SMN2-208ENST00000508258 POU4F2Q12837 409 aa3.25□□□□□ -1.89
SMN2-208ENST00000508258 ELOAQ14241 798 aaKnown RBP3.25□□□□□ -1.89
SMN2-208ENST00000508258 FOXR1Q6PIV2 292 aa3.25□□□□□ -1.89
SMN2-208ENST00000508258 SVOPQ8N4V2 548 aa3.25□□□□□ -1.89
SMN2-208ENST00000508258 CCDC85AQ96PX6 553 aaPredicted RBP3.25□□□□□ -1.89
SMN2-208ENST00000508258 CDCA7Q9BWT1 371 aaPredicted RBP3.25□□□□□ -1.89
SMN2-208ENST00000508258 OSBPL3Q9H4L5 887 aa3.25□□□□□ -1.89
SMN2-208ENST00000508258 SENP3-EIF4A1A0A087X0R7 540 aa3.24□□□□□ -1.89
SMN2-208ENST00000508258 GPR25O00155 361 aa3.24□□□□□ -1.89
SMN2-208ENST00000508258 PIK3CDO00329 1044 aa3.24□□□□□ -1.89
SMN2-208ENST00000508258 GPC1P35052 558 aa3.24□□□□□ -1.89
SMN2-208ENST00000508258 PHKA2P46019 1235 aa3.24□□□□□ -1.89
SMN2-208ENST00000508258 USP4Q13107 963 aa3.24□□□□□ -1.89
SMN2-208ENST00000508258 CLN3Q13286 438 aa3.24□□□□□ -1.89
SMN2-208ENST00000508258 RNFT1Q5M7Z0 435 aa3.24□□□□□ -1.89
SMN2-208ENST00000508258 TMCO4Q5TGY1 634 aa3.24□□□□□ -1.89
SMN2-208ENST00000508258 TMEM214Q6NUQ4 689 aaKnown RBP3.24□□□□□ -1.89
SMN2-208ENST00000508258 NBPF10Q6P3W6 841 aaKnown RBP3.24□□□□□ -1.89
SMN2-208ENST00000508258 PLEKHM2Q8IWE5 1019 aa3.24□□□□□ -1.89
SMN2-208ENST00000508258 NBPF15Q8N660 670 aa3.24□□□□□ -1.89
SMN2-208ENST00000508258 CNKSR1Q969H4 720 aa3.24□□□□□ -1.89
SMN2-208ENST00000508258 VRTNQ9H8Y1 702 aa3.24□□□□□ -1.89
SMN2-208ENST00000508258 TIMMDC1Q9NPL8 285 aa3.24□□□□□ -1.89
SMN2-208ENST00000508258 WASLO00401 505 aaPredicted RBP3.23□□□□□ -1.89
SMN2-208ENST00000508258 GNRH1P01148 92 aa3.23□□□□□ -1.89
SMN2-208ENST00000508258 MFAP1P55081 439 aaKnown RBP3.23□□□□□ -1.89
SMN2-208ENST00000508258 KRT76Q01546 638 aa3.23□□□□□ -1.89
SMN2-208ENST00000508258 MAP3K10Q02779 954 aa3.23□□□□□ -1.89
SMN2-208ENST00000508258 CENPCQ03188 943 aa3.23□□□□□ -1.89
SMN2-208ENST00000508258 TSGA10IPQ3SY00 556 aa3.23□□□□□ -1.89
SMN2-208ENST00000508258 CDCA8Q53HL2 280 aa3.23□□□□□ -1.89
SMN2-208ENST00000508258 ESCO1Q5FWF5 840 aa3.23□□□□□ -1.89
SMN2-208ENST00000508258 GNASQ5JWF2 1037 aa3.23□□□□□ -1.89
SMN2-208ENST00000508258 TAS1R3Q7RTX0 852 aa3.23□□□□□ -1.89
SMN2-208ENST00000508258 PHTF2Q8N3S3 785 aa3.23□□□□□ -1.89
SMN2-208ENST00000508258 NANOS1Q8WY41 292 aaKnown RBP3.23□□□□□ -1.89
SMN2-208ENST00000508258 SIRT1Q96EB6 747 aa3.23□□□□□ -1.89
SMN2-208ENST00000508258 TRERF1Q96PN7 1200 aa3.23□□□□□ -1.89
SMN2-208ENST00000508258 ZSCAN10Q96SZ4 725 aaPredicted RBP3.23□□□□□ -1.89
SMN2-208ENST00000508258 GPAMQ9HCL2 828 aa3.23□□□□□ -1.89
SMN2-208ENST00000508258 CUEDC1Q9NWM3 386 aaPredicted RBP3.23□□□□□ -1.89
SMN2-208ENST00000508258 CHIC2Q9UKJ5 165 aa3.23□□□□□ -1.89
SMN2-208ENST00000508258 MTMR7Q9Y216 660 aa3.23□□□□□ -1.89
SMN2-208ENST00000508258 USP17L3A6NCW0 530 aa3.22□□□□□ -1.89
SMN2-208ENST00000508258 USP17L4A6NCW7 530 aa3.22□□□□□ -1.89
SMN2-208ENST00000508258 H7C1W4 665 aa3.22□□□□□ -1.89
SMN2-208ENST00000508258 STAU1O95793 577 aaKnown RBP3.22□□□□□ -1.89
SMN2-208ENST00000508258 IL2RAP01589 272 aa3.22□□□□□ -1.89
SMN2-208ENST00000508258 LORP23490 312 aaPredicted RBP3.22□□□□□ -1.89
SMN2-208ENST00000508258 TLR1Q15399 786 aa3.22□□□□□ -1.89
SMN2-208ENST00000508258 DBN1Q16643 649 aa3.22□□□□□ -1.89
SMN2-208ENST00000508258 USP17L2Q6R6M4 530 aa3.22□□□□□ -1.89
SMN2-208ENST00000508258 USP17L1Q7RTZ2 530 aa3.22□□□□□ -1.89
SMN2-208ENST00000508258 TRIM22Q8IYM9 498 aa3.22□□□□□ -1.89
SMN2-208ENST00000508258 PGBD3Q8N328 593 aa3.22□□□□□ -1.89
SMN2-208ENST00000508258 GTPBP3Q969Y2 492 aaKnown RBP3.22□□□□□ -1.89
SMN2-208ENST00000508258 ZNF837Q96EG3 531 aaPredicted RBP3.22□□□□□ -1.89
SMN2-208ENST00000508258 ESYT1Q9BSJ8 1104 aa3.22□□□□□ -1.89
SMN2-208ENST00000508258 GRIP2Q9C0E4 1043 aa3.22□□□□□ -1.89
SMN2-208ENST00000508258 NUCKS1Q9H1E3 243 aaKnown RBP3.22□□□□□ -1.89
SMN2-208ENST00000508258 ZMIZ1Q9ULJ6 1067 aa3.22□□□□□ -1.89
SMN2-208ENST00000508258 GNEQ9Y223 722 aaKnown RBP3.22□□□□□ -1.89
SMN2-208ENST00000508258 DYRK1BQ9Y463 629 aa3.22□□□□□ -1.89
SMN2-208ENST00000508258 FAM196BA6NMK8 535 aa3.21□□□□□ -1.9
SMN2-208ENST00000508258 USP17L5A8MUK1 530 aa3.21□□□□□ -1.9
SMN2-208ENST00000508258 LZTS3O60299 673 aaPredicted RBP3.21□□□□□ -1.9
SMN2-208ENST00000508258 ADAMTS2O95450 1211 aa3.21□□□□□ -1.9
SMN2-208ENST00000508258 F11P03951 625 aa3.21□□□□□ -1.9
SMN2-208ENST00000508258 SKIP12755 728 aa3.21□□□□□ -1.9
SMN2-208ENST00000508258 MARSP56192 900 aaKnown RBP3.21□□□□□ -1.9
SMN2-208ENST00000508258 PSME1Q06323 249 aa3.21□□□□□ -1.9
SMN2-208ENST00000508258 FAM69CQ0P6D2 419 aa3.21□□□□□ -1.9
SMN2-208ENST00000508258 TMEM164Q5U3C3 297 aa3.21□□□□□ -1.9
SMN2-208ENST00000508258 PHLDB3Q6NSJ2 640 aa3.21□□□□□ -1.9
SMN2-208ENST00000508258 PLPP7Q8NBV4 271 aa3.21□□□□□ -1.9
SMN2-208ENST00000508258 STK32AQ8WU08 396 aa3.21□□□□□ -1.9
SMN2-208ENST00000508258 AIDAQ96BJ3 306 aa3.21□□□□□ -1.9
SMN2-208ENST00000508258 ETNK1Q9HBU6 452 aa3.21□□□□□ -1.9
SMN2-208ENST00000508258 SERTAD1Q9UHV2 236 aa3.21□□□□□ -1.9
SMN2-208ENST00000508258 IVNS1ABPQ9Y6Y0 642 aa3.21□□□□□ -1.9
SMN2-208ENST00000508258 A0A1B0GTH6 734 aa3.2□□□□□ -1.9
SMN2-208ENST00000508258 SPATA31C2B4DYI2 1134 aa3.2□□□□□ -1.9
SMN2-208ENST00000508258 RNF225M0QZC1 329 aaPredicted RBP3.2□□□□□ -1.9
SMN2-208ENST00000508258 MX2P20592 715 aa3.2□□□□□ -1.9
SMN2-208ENST00000508258 PLA2G4AP47712 749 aa3.2□□□□□ -1.9
SMN2-208ENST00000508258 GDF10P55107 478 aa3.2□□□□□ -1.9
SMN2-208ENST00000508258 PTK7Q13308 1070 aa3.2□□□□□ -1.9
SMN2-208ENST00000508258 GAS6Q14393 721 aa3.2□□□□□ -1.9
SMN2-208ENST00000508258 EML3Q32P44 896 aa3.2□□□□□ -1.9
SMN2-208ENST00000508258 MAP7D1Q3KQU3 841 aa3.2□□□□□ -1.9
SMN2-208ENST00000508258 CRTC2Q53ET0 693 aaPredicted RBP3.2□□□□□ -1.9
SMN2-208ENST00000508258 ZNF385CQ66K41 422 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms