RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 OVOS2A0A0G2JMS6 1433 aa14.14□□□□□ -0.15
PROM1-207ENST00000508167 LMO7Q8WWI1 1683 aa14.14□□□□□ -0.15
PROM1-207ENST00000508167 PTCD1O75127 700 aaKnown RBP14.14□□□□□ -0.15
PROM1-207ENST00000508167 MARCH10Q8NA82 808 aaPredicted RBP14.14□□□□□ -0.15
PROM1-207ENST00000508167 PLCH1Q4KWH8 1693 aa14.13□□□□□ -0.15
PROM1-207ENST00000508167 SLC39A6Q13433 755 aa14.13□□□□□ -0.15
PROM1-207ENST00000508167 RGPD2P0DJD1 1756 aa14.13□□□□□ -0.15
PROM1-207ENST00000508167 BCAR3O75815 825 aa14.13□□□□□ -0.15
PROM1-207ENST00000508167 NPM2Q86SE8 214 aaKnown RBP14.12□□□□□ -0.15
PROM1-207ENST00000508167 ARXQ96QS3 562 aa14.12□□□□□ -0.15
PROM1-207ENST00000508167 LRRC37A3O60309 1634 aa14.12□□□□□ -0.15
PROM1-207ENST00000508167 CANXP27824 592 aaKnown RBP14.12□□□□□ -0.15
PROM1-207ENST00000508167 CFAP44Q96MT7 982 aa14.12□□□□□ -0.15
PROM1-207ENST00000508167 NECTIN2Q92692 538 aa14.12□□□□□ -0.15
PROM1-207ENST00000508167 SLC52A2Q9HAB3 445 aa14.12□□□□□ -0.15
PROM1-207ENST00000508167 IFT57Q9NWB7 429 aa14.12□□□□□ -0.15
PROM1-207ENST00000508167 ATRNO75882 1429 aa14.11□□□□□ -0.15
PROM1-207ENST00000508167 EIF2S2P20042 333 aaKnown RBP14.11□□□□□ -0.15
PROM1-207ENST00000508167 SKAP1Q86WV1 359 aa14.11□□□□□ -0.15
PROM1-207ENST00000508167 ERVV-2B6SEH9 535 aa14.1□□□□□ -0.15
PROM1-207ENST00000508167 EXOSC9Q06265 439 aaKnown RBP14.1□□□□□ -0.15
PROM1-207ENST00000508167 SF3B2Q13435 895 aaKnown RBP14.1□□□□□ -0.15
PROM1-207ENST00000508167 FAM196AQ6ZSG2 479 aa14.1□□□□□ -0.15
PROM1-207ENST00000508167 ZNF330Q9Y3S2 320 aaPredicted RBP14.1□□□□□ -0.15
PROM1-207ENST00000508167 CCDC136Q96JN2 1154 aa14.1□□□□□ -0.15
PROM1-207ENST00000508167 MBIPQ9NS73 344 aa14.1□□□□□ -0.15
PROM1-207ENST00000508167 RGS17Q9UGC6 210 aaPredicted RBP14.1□□□□□ -0.15
PROM1-207ENST00000508167 TCERG1O14776 1098 aaKnown RBP14.09□□□□□ -0.15
PROM1-207ENST00000508167 NWD2Q9ULI1 1742 aa14.09□□□□□ -0.15
PROM1-207ENST00000508167 TRIM37O94972 964 aa14.09□□□□□ -0.15
PROM1-207ENST00000508167 FAM208AQ9UK61 1670 aaKnown RBP14.08□□□□□ -0.16
PROM1-207ENST00000508167 TNS2Q63HR2 1409 aa14.08□□□□□ -0.16
PROM1-207ENST00000508167 KCNQ2O43526 872 aa14.08□□□□□ -0.16
PROM1-207ENST00000508167 IL16Q14005 1332 aa14.07□□□□□ -0.16
PROM1-207ENST00000508167 RARSP54136 660 aaKnown RBP14.07□□□□□ -0.16
PROM1-207ENST00000508167 BCL2L13Q9BXK5 485 aa14.07□□□□□ -0.16
PROM1-207ENST00000508167 TNNQ9UQP3 1299 aa14.07□□□□□ -0.16
PROM1-207ENST00000508167 TWISTNBQ3B726 338 aaPredicted RBP14.06□□□□□ -0.16
PROM1-207ENST00000508167 ZNF790Q6PG37 636 aa14.06□□□□□ -0.16
PROM1-207ENST00000508167 PIGBQ92521 554 aa14.06□□□□□ -0.16
PROM1-207ENST00000508167 KCNQ3O43525 872 aa14.06□□□□□ -0.16
PROM1-207ENST00000508167 STK31Q9BXU1 1019 aa14.06□□□□□ -0.16
PROM1-207ENST00000508167 KRT24Q2M2I5 525 aa14.06□□□□□ -0.16
PROM1-207ENST00000508167 FMNL2Q96PY5 1086 aa14.06□□□□□ -0.16
PROM1-207ENST00000508167 ASAP1Q9ULH1 1129 aa14.06□□□□□ -0.16
PROM1-207ENST00000508167 NCAPD2Q15021 1401 aa14.06□□□□□ -0.16
PROM1-207ENST00000508167 DISP2A7MBM2 1401 aa14.06□□□□□ -0.16
PROM1-207ENST00000508167 CHL1O00533 1208 aa14.06□□□□□ -0.16
PROM1-207ENST00000508167 NKX1-1Q15270 411 aaPredicted RBP14.06□□□□□ -0.16
PROM1-207ENST00000508167 FRAT1Q92837 279 aaPredicted RBP14.06□□□□□ -0.16
PROM1-207ENST00000508167 ONECUT3O60422 494 aaPredicted RBP14.05□□□□□ -0.16
PROM1-207ENST00000508167 RLBP1P12271 317 aa14.04□□□□□ -0.16
PROM1-207ENST00000508167 SMARCC1Q92922 1105 aaPredicted RBP14.04□□□□□ -0.16
PROM1-207ENST00000508167 SMC4Q9NTJ3 1288 aa14.04□□□□□ -0.16
PROM1-207ENST00000508167 APBA3O96018 575 aa14.04□□□□□ -0.16
PROM1-207ENST00000508167 HDGFL1Q5TGJ6 251 aa14.04□□□□□ -0.16
PROM1-207ENST00000508167 CHMP4AQ9BY43 222 aa14.04□□□□□ -0.16
PROM1-207ENST00000508167 ZNF496Q96IT1 587 aaPredicted RBP14.03□□□□□ -0.16
PROM1-207ENST00000508167 C8orf58Q8NAV2 365 aa14.03□□□□□ -0.16
PROM1-207ENST00000508167 NRAPQ86VF7 1730 aa14.03□□□□□ -0.16
PROM1-207ENST00000508167 KDM6AO15550 1401 aaPredicted RBP14.03□□□□□ -0.16
PROM1-207ENST00000508167 ATP6V1AP38606 617 aa14.02□□□□□ -0.16
PROM1-207ENST00000508167 N4BP2Q86UW6 1770 aaPredicted RBP14.02□□□□□ -0.16
PROM1-207ENST00000508167 PARP4Q9UKK3 1724 aaKnown RBP14.02□□□□□ -0.17
PROM1-207ENST00000508167 PLEKHG2Q9H7P9 1386 aa14.01□□□□□ -0.17
PROM1-207ENST00000508167 SNRPA1P09661 255 aaKnown RBP14.01□□□□□ -0.17
PROM1-207ENST00000508167 TSPYL6Q8N831 410 aa14.01□□□□□ -0.17
PROM1-207ENST00000508167 GLI3P10071 1580 aa14.01□□□□□ -0.17
PROM1-207ENST00000508167 CEMIPQ8WUJ3 1361 aa14.01□□□□□ -0.17
PROM1-207ENST00000508167 BABAM1Q9NWV8 329 aa14.01□□□□□ -0.17
PROM1-207ENST00000508167 EIF4A1P60842 406 aaKnown RBP14□□□□□ -0.17
PROM1-207ENST00000508167 GOLGA6L2Q8N9W4 650 aaPredicted RBP14□□□□□ -0.17
PROM1-207ENST00000508167 STARD3NLO95772 234 aa14□□□□□ -0.17
PROM1-207ENST00000508167 CCDC30Q5VVM6 783 aa14□□□□□ -0.17
PROM1-207ENST00000508167 ATG3Q9NT62 314 aa14□□□□□ -0.17
PROM1-207ENST00000508167 IGHDP01880 384 aa14□□□□□ -0.17
PROM1-207ENST00000508167 KCNQ4P56696 695 aa14□□□□□ -0.17
PROM1-207ENST00000508167 PDE3AQ14432 1141 aa14□□□□□ -0.17
PROM1-207ENST00000508167 ZNF853P0CG23 659 aa13.99□□□□□ -0.17
PROM1-207ENST00000508167 MYL6BP14649 208 aa13.99□□□□□ -0.17
PROM1-207ENST00000508167 PTF1AQ7RTS3 328 aa13.99□□□□□ -0.17
PROM1-207ENST00000508167 BCL11BQ9C0K0 894 aaPredicted RBP13.99□□□□□ -0.17
PROM1-207ENST00000508167 CCNL1Q9UK58 526 aaPredicted RBP13.99□□□□□ -0.17
PROM1-207ENST00000508167 AIMP1Q12904 312 aaKnown RBP13.99□□□□□ -0.17
PROM1-207ENST00000508167 LOC102724428A0A0B4J2F2 783 aa13.98□□□□□ -0.17
PROM1-207ENST00000508167 SLC4A2P04920 1241 aa13.98□□□□□ -0.17
PROM1-207ENST00000508167 PIP4K2AP48426 406 aaPredicted RBP13.98□□□□□ -0.17
PROM1-207ENST00000508167 SIK1P57059 783 aa13.98□□□□□ -0.17
PROM1-207ENST00000508167 DNAJC10Q8IXB1 793 aa13.98□□□□□ -0.17
PROM1-207ENST00000508167 BACH2Q9BYV9 841 aa13.98□□□□□ -0.17
PROM1-207ENST00000508167 RGS12O14924 1447 aa13.98□□□□□ -0.17
PROM1-207ENST00000508167 PALLDQ8WX93 1383 aa13.98□□□□□ -0.17
PROM1-207ENST00000508167 TEX13AQ9BXU3 409 aaPredicted RBP13.97□□□□□ -0.17
PROM1-207ENST00000508167 ANXA1P04083 346 aa13.97□□□□□ -0.17
PROM1-207ENST00000508167 PRAMEF22A3QJZ6 481 aa13.97□□□□□ -0.17
PROM1-207ENST00000508167 PANK1Q8TE04 598 aa13.97□□□□□ -0.17
PROM1-207ENST00000508167 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.97□□□□□ -0.17
PROM1-207ENST00000508167 GIGYF1O75420 1035 aaPredicted RBP13.96□□□□□ -0.17
PROM1-207ENST00000508167 FTSJ3Q8IY81 847 aaKnown RBP13.96□□□□□ -0.17
PROM1-207ENST00000508167 USP16Q9Y5T5 823 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms