RNA–Protein interactions for RNA: ENST00000507901.5

DDR1-261, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-261ENST00000507901 ATG3Q9NT62 314 aa21.79■■□□□ 1.08
DDR1-261ENST00000507901 ASAP1Q9ULH1 1129 aa21.79■■□□□ 1.08
DDR1-261ENST00000507901 QSER1Q2KHR3 1735 aa21.78■■□□□ 1.08
DDR1-261ENST00000507901 UBR2Q8IWV8 1755 aa21.78■■□□□ 1.08
DDR1-261ENST00000507901 LRP5O75197 1615 aa21.77■■□□□ 1.08
DDR1-261ENST00000507901 NFATC2IPQ8NCF5 419 aa21.77■■□□□ 1.08
DDR1-261ENST00000507901 SMARCC1Q92922 1105 aaPredicted RBP21.77■■□□□ 1.08
DDR1-261ENST00000507901 ADAMTS8Q9UP79 889 aa21.77■■□□□ 1.08
DDR1-261ENST00000507901 TUBGCP6Q96RT7 1819 aa21.77■■□□□ 1.08
DDR1-261ENST00000507901 CASZ1Q86V15 1759 aa21.76■■□□□ 1.07
DDR1-261ENST00000507901 CABP4P57796 275 aa21.76■■□□□ 1.07
DDR1-261ENST00000507901 HTATSF1O43719 755 aaKnown RBP21.75■■□□□ 1.07
DDR1-261ENST00000507901 PNNQ9H307 717 aaKnown RBP21.75■■□□□ 1.07
DDR1-261ENST00000507901 KCPQ6ZWJ8 1503 aa21.75■■□□□ 1.07
DDR1-261ENST00000507901 COL5A3P25940 1745 aaPredicted RBP21.75■■□□□ 1.07
DDR1-261ENST00000507901 NFE2L2Q16236 605 aa21.74■■□□□ 1.07
DDR1-261ENST00000507901 AKT1S1Q96B36 256 aa21.74■■□□□ 1.07
DDR1-261ENST00000507901 SLC4A9Q96Q91 983 aa21.74■■□□□ 1.07
DDR1-261ENST00000507901 TJP1Q07157 1748 aa21.73■■□□□ 1.07
DDR1-261ENST00000507901 KCNQ4P56696 695 aa21.73■■□□□ 1.07
DDR1-261ENST00000507901 CCNL1Q9UK58 526 aaPredicted RBP21.73■■□□□ 1.07
DDR1-261ENST00000507901 C4BP0C0L5 1744 aa21.72■■□□□ 1.07
DDR1-261ENST00000507901 LOC102724428A0A0B4J2F2 783 aa21.72■■□□□ 1.07
DDR1-261ENST00000507901 SIK1P57059 783 aa21.72■■□□□ 1.07
DDR1-261ENST00000507901 WDR43Q15061 677 aaKnown RBP eCLIP21.72■■□□□ 1.07
DDR1-261ENST00000507901 ZNF827Q17R98 1081 aa21.72■■□□□ 1.07
DDR1-261ENST00000507901 PNISRQ8TF01 805 aaKnown RBP21.72■■□□□ 1.07
DDR1-261ENST00000507901 SLC15A2Q16348 729 aa21.71■■□□□ 1.07
DDR1-261ENST00000507901 STK32BQ9NY57 414 aa21.71■■□□□ 1.07
DDR1-261ENST00000507901 RUNDC1Q96C34 613 aa21.7■■□□□ 1.06
DDR1-261ENST00000507901 UBR3Q6ZT12 1888 aa21.69■■□□□ 1.06
DDR1-261ENST00000507901 ITPK1Q13572 414 aa21.69■■□□□ 1.06
DDR1-261ENST00000507901 MCM10Q7L590 875 aa21.69■■□□□ 1.06
DDR1-261ENST00000507901 MAPK8IP3Q9UPT6 1336 aa21.69■■□□□ 1.06
DDR1-261ENST00000507901 TMPOP42166 694 aaKnown RBP21.68■■□□□ 1.06
DDR1-261ENST00000507901 CCDC146Q8IYE0 955 aa21.68■■□□□ 1.06
DDR1-261ENST00000507901 SPON1Q9HCB6 807 aa21.68■■□□□ 1.06
DDR1-261ENST00000507901 KDM3BQ7LBC6 1761 aa21.67■■□□□ 1.06
DDR1-261ENST00000507901 NEFMP07197 916 aa21.67■■□□□ 1.06
DDR1-261ENST00000507901 DCTN1Q14203 1278 aa21.67■■□□□ 1.06
DDR1-261ENST00000507901 MRS2Q9HD23 443 aa21.67■■□□□ 1.06
DDR1-261ENST00000507901 MYH14Q7Z406 1995 aaKnown RBP21.67■■□□□ 1.06
DDR1-261ENST00000507901 SLC39A6Q13433 755 aa21.66■■□□□ 1.06
DDR1-261ENST00000507901 LINC00116Q8NCU8 138 aa21.66■■□□□ 1.06
DDR1-261ENST00000507901 TEFQ10587 303 aa21.65■■□□□ 1.06
DDR1-261ENST00000507901 RTF1Q92541 710 aaKnown RBP21.65■■□□□ 1.06
DDR1-261ENST00000507901 COL24A1Q17RW2 1714 aa21.65■■□□□ 1.06
DDR1-261ENST00000507901 ATP6V1AP38606 617 aa21.64■■□□□ 1.05
DDR1-261ENST00000507901 RIPK4P57078 832 aa21.63■■□□□ 1.05
DDR1-261ENST00000507901 PDGFDQ9GZP0 370 aaPredicted RBP21.63■■□□□ 1.05
DDR1-261ENST00000507901 TRIM35Q9UPQ4 493 aa21.63■■□□□ 1.05
DDR1-261ENST00000507901 PNPLA7Q6ZV29 1317 aa21.62■■□□□ 1.05
DDR1-261ENST00000507901 HMGB2P26583 209 aaKnown RBP21.62■■□□□ 1.05
DDR1-261ENST00000507901 ZNF790Q6PG37 636 aa21.62■■□□□ 1.05
DDR1-261ENST00000507901 AMIGO3Q86WK7 504 aa21.62■■□□□ 1.05
DDR1-261ENST00000507901 PTCD1O75127 700 aaKnown RBP21.61■■□□□ 1.05
DDR1-261ENST00000507901 VSIG10Q8N0Z9 540 aa21.61■■□□□ 1.05
DDR1-261ENST00000507901 RBM42Q9BTD8 480 aaKnown RBP21.61■■□□□ 1.05
DDR1-261ENST00000507901 THUMPD2Q9BTF0 503 aaKnown RBP21.61■■□□□ 1.05
DDR1-261ENST00000507901 KCNQ3O43525 872 aa21.6■■□□□ 1.05
DDR1-261ENST00000507901 PPP1R1BQ9UD71 204 aaPredicted RBP21.6■■□□□ 1.05
DDR1-261ENST00000507901 RRP7AQ9Y3A4 280 aaKnown RBP21.6■■□□□ 1.05
DDR1-261ENST00000507901 CNTNAP4Q9C0A0 1308 aa21.59■■□□□ 1.05
DDR1-261ENST00000507901 BTBD11A6QL63 1104 aa21.59■■□□□ 1.05
DDR1-261ENST00000507901 ZNF496Q96IT1 587 aaPredicted RBP21.59■■□□□ 1.05
DDR1-261ENST00000507901 APAF1O14727 1248 aa21.58■■□□□ 1.05
DDR1-261ENST00000507901 LMOD3Q0VAK6 560 aa21.58■■□□□ 1.05
DDR1-261ENST00000507901 TAF7Q15545 349 aaPredicted RBP21.58■■□□□ 1.05
DDR1-261ENST00000507901 RC3H1Q5TC82 1133 aaKnown RBP21.58■■□□□ 1.05
DDR1-261ENST00000507901 HEG1Q9ULI3 1381 aa21.58■■□□□ 1.04
DDR1-261ENST00000507901 ZBTB7AO95365 584 aa21.57■■□□□ 1.04
DDR1-261ENST00000507901 DNAJC10Q8IXB1 793 aa21.56■■□□□ 1.04
DDR1-261ENST00000507901 TFCP2L1Q9NZI6 479 aa21.56■■□□□ 1.04
DDR1-261ENST00000507901 C4AP0C0L4 1744 aa21.55■■□□□ 1.04
DDR1-261ENST00000507901 CCER2I3L3R5 266 aa21.55■■□□□ 1.04
DDR1-261ENST00000507901 DIEXFQ68CQ4 756 aaKnown RBP21.55■■□□□ 1.04
DDR1-261ENST00000507901 COL23A1Q86Y22 540 aaPredicted RBP21.55■■□□□ 1.04
DDR1-261ENST00000507901 TTC5Q8N0Z6 440 aa21.55■■□□□ 1.04
DDR1-261ENST00000507901 MTFR1LQ9H019 292 aa21.55■■□□□ 1.04
DDR1-261ENST00000507901 CYP19A1P11511 503 aaPredicted RBP21.54■■□□□ 1.04
DDR1-261ENST00000507901 NEUROD2Q15784 382 aa21.54■■□□□ 1.04
DDR1-261ENST00000507901 NCBP3Q53F19 620 aaKnown RBP21.54■■□□□ 1.04
DDR1-261ENST00000507901 LAMB4A4D0S4 1761 aa21.53■■□□□ 1.04
DDR1-261ENST00000507901 SSFA2P28290 1259 aa21.53■■□□□ 1.04
DDR1-261ENST00000507901 CRKLP46109 303 aaKnown RBP21.53■■□□□ 1.04
DDR1-261ENST00000507901 INTS5Q6P9B9 1019 aaKnown RBP21.53■■□□□ 1.04
DDR1-261ENST00000507901 AK7Q96M32 723 aa21.53■■□□□ 1.04
DDR1-261ENST00000507901 FMNL2Q96PY5 1086 aa21.53■■□□□ 1.04
DDR1-261ENST00000507901 SGIP1Q9BQI5 828 aa21.53■■□□□ 1.04
DDR1-261ENST00000507901 BABAM1Q9NWV8 329 aa21.53■■□□□ 1.04
DDR1-261ENST00000507901 ATF5Q9Y2D1 282 aaPredicted RBP21.53■■□□□ 1.04
DDR1-261ENST00000507901 PTGER2P43116 358 aa21.52■■□□□ 1.04
DDR1-261ENST00000507901 MIS18AQ9NYP9 233 aa21.52■■□□□ 1.04
DDR1-261ENST00000507901 RPS6KA4O75676 772 aa21.51■■□□□ 1.03
DDR1-261ENST00000507901 SMIM5Q71RC9 77 aa21.51■■□□□ 1.03
DDR1-261ENST00000507901 SLC16A10Q8TF71 515 aa21.51■■□□□ 1.03
DDR1-261ENST00000507901 GNPATO15228 680 aa21.5■■□□□ 1.03
DDR1-261ENST00000507901 CCDC27Q2M243 656 aa21.5■■□□□ 1.03
DDR1-261ENST00000507901 FLAD1Q8NFF5 587 aa21.5■■□□□ 1.03
DDR1-261ENST00000507901 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms