RNA–Protein interactions for RNA: ENST00000507874.5

CLDND1-215, Transcript of claudin domain containing 1, humanhuman

TSL 3 BASIC

Gene CLDND1, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-215ENST00000507874 PRKAR2BP31323 418 aa20.23■□□□□ 0.83
CLDND1-215ENST00000507874 U2AF1Q01081 240 aaKnown RBP eCLIP20.23■□□□□ 0.83
CLDND1-215ENST00000507874 NFATC2IPQ8NCF5 419 aa20.23■□□□□ 0.83
CLDND1-215ENST00000507874 MTFR1LQ9H019 292 aa20.23■□□□□ 0.83
CLDND1-215ENST00000507874 PTGER2P43116 358 aa20.22■□□□□ 0.83
CLDND1-215ENST00000507874 ITPK1Q13572 414 aa20.22■□□□□ 0.83
CLDND1-215ENST00000507874 MRC1P22897 1456 aa20.22■□□□□ 0.83
CLDND1-215ENST00000507874 HMGB2P26583 209 aaKnown RBP20.21■□□□□ 0.83
CLDND1-215ENST00000507874 ATP6V1AP38606 617 aa20.21■□□□□ 0.83
CLDND1-215ENST00000507874 RALBP1Q15311 655 aa20.21■□□□□ 0.83
CLDND1-215ENST00000507874 LINC00116Q8NCU8 138 aa20.21■□□□□ 0.83
CLDND1-215ENST00000507874 PHACTR3Q96KR7 559 aa20.21■□□□□ 0.83
CLDND1-215ENST00000507874 SLC4A9Q96Q91 983 aa20.21■□□□□ 0.83
CLDND1-215ENST00000507874 ZNF831Q5JPB2 1677 aa20.21■□□□□ 0.83
CLDND1-215ENST00000507874 GAS2L2Q8NHY3 880 aa20.21■□□□□ 0.83
CLDND1-215ENST00000507874 RBM42Q9BTD8 480 aaKnown RBP20.21■□□□□ 0.83
CLDND1-215ENST00000507874 SLC52A2Q9HAB3 445 aa20.21■□□□□ 0.83
CLDND1-215ENST00000507874 PPP1R1BQ9UD71 204 aaPredicted RBP20.21■□□□□ 0.83
CLDND1-215ENST00000507874 UBR3Q6ZT12 1888 aa20.2■□□□□ 0.82
CLDND1-215ENST00000507874 COL23A1Q86Y22 540 aaPredicted RBP20.2■□□□□ 0.82
CLDND1-215ENST00000507874 SLC16A10Q8TF71 515 aa20.2■□□□□ 0.82
CLDND1-215ENST00000507874 SGIP1Q9BQI5 828 aa20.2■□□□□ 0.82
CLDND1-215ENST00000507874 MAP3K5Q99683 1374 aa20.19■□□□□ 0.82
CLDND1-215ENST00000507874 COL24A1Q17RW2 1714 aa20.18■□□□□ 0.82
CLDND1-215ENST00000507874 SRCAPQ6ZRS2 3230 aa20.18■□□□□ 0.82
CLDND1-215ENST00000507874 FCHSD2O94868 740 aa20.18■□□□□ 0.82
CLDND1-215ENST00000507874 AMIGO3Q86WK7 504 aa20.18■□□□□ 0.82
CLDND1-215ENST00000507874 AK7Q96M32 723 aa20.18■□□□□ 0.82
CLDND1-215ENST00000507874 COL5A3P25940 1745 aaPredicted RBP20.17■□□□□ 0.82
CLDND1-215ENST00000507874 GNAT3A8MTJ3 354 aa20.17■□□□□ 0.82
CLDND1-215ENST00000507874 SMIM5Q71RC9 77 aa20.17■□□□□ 0.82
CLDND1-215ENST00000507874 MSH5O43196 834 aa20.16■□□□□ 0.82
CLDND1-215ENST00000507874 PTCD1O75127 700 aaKnown RBP20.16■□□□□ 0.82
CLDND1-215ENST00000507874 IL17REQ8NFR9 667 aa20.16■□□□□ 0.82
CLDND1-215ENST00000507874 TJP1Q07157 1748 aa20.15■□□□□ 0.82
CLDND1-215ENST00000507874 MYBBP1AQ9BQG0 1328 aaKnown RBP20.15■□□□□ 0.82
CLDND1-215ENST00000507874 SLC39A6Q13433 755 aa20.14■□□□□ 0.81
CLDND1-215ENST00000507874 FLAD1Q8NFF5 587 aa20.14■□□□□ 0.81
CLDND1-215ENST00000507874 CICQ96RK0 1608 aaPredicted RBP20.14■□□□□ 0.81
CLDND1-215ENST00000507874 SIPA1L3O60292 1781 aaPredicted RBP20.14■□□□□ 0.81
CLDND1-215ENST00000507874 GNPATO15228 680 aa20.13■□□□□ 0.81
CLDND1-215ENST00000507874 PHF14O94880 888 aa20.13■□□□□ 0.81
CLDND1-215ENST00000507874 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.12■□□□□ 0.81
CLDND1-215ENST00000507874 SSFA2P28290 1259 aa20.12■□□□□ 0.81
CLDND1-215ENST00000507874 KCPQ6ZWJ8 1503 aa20.12■□□□□ 0.81
CLDND1-215ENST00000507874 ARXQ96QS3 562 aa20.11■□□□□ 0.81
CLDND1-215ENST00000507874 CEMIPQ8WUJ3 1361 aa20.11■□□□□ 0.81
CLDND1-215ENST00000507874 UBR2Q8IWV8 1755 aa20.11■□□□□ 0.81
CLDND1-215ENST00000507874 MYH14Q7Z406 1995 aaKnown RBP20.11■□□□□ 0.81
CLDND1-215ENST00000507874 TEFQ10587 303 aa20.1■□□□□ 0.81
CLDND1-215ENST00000507874 RC3H1Q5TC82 1133 aaKnown RBP20.1■□□□□ 0.81
CLDND1-215ENST00000507874 MSL1Q68DK7 614 aa20.1■□□□□ 0.81
CLDND1-215ENST00000507874 PRKRIP1Q9H875 184 aaPredicted RBP20.1■□□□□ 0.81
CLDND1-215ENST00000507874 CNTNAP4Q9C0A0 1308 aa20.1■□□□□ 0.81
CLDND1-215ENST00000507874 POLD1P28340 1107 aa20.09■□□□□ 0.81
CLDND1-215ENST00000507874 PLEKHF1Q96S99 279 aa20.09■□□□□ 0.81
CLDND1-215ENST00000507874 FHDC1Q9C0D6 1143 aaPredicted RBP20.09■□□□□ 0.81
CLDND1-215ENST00000507874 DLG5Q8TDM6 1919 aa20.08■□□□□ 0.81
CLDND1-215ENST00000507874 ZNF316A6NFI3 1004 aaPredicted RBP20.08■□□□□ 0.8
CLDND1-215ENST00000507874 DNAJC10Q8IXB1 793 aa20.08■□□□□ 0.8
CLDND1-215ENST00000507874 RTCBQ9Y3I0 505 aaKnown RBP20.08■□□□□ 0.8
CLDND1-215ENST00000507874 CRKLP46109 303 aaKnown RBP20.07■□□□□ 0.8
CLDND1-215ENST00000507874 MCM10Q7L590 875 aa20.07■□□□□ 0.8
CLDND1-215ENST00000507874 SYT17Q9BSW7 474 aa20.07■□□□□ 0.8
CLDND1-215ENST00000507874 RPS6KA4O75676 772 aa20.06■□□□□ 0.8
CLDND1-215ENST00000507874 NEFMP07197 916 aa20.06■□□□□ 0.8
CLDND1-215ENST00000507874 DCTN1Q14203 1278 aa20.06■□□□□ 0.8
CLDND1-215ENST00000507874 RTF1Q92541 710 aaKnown RBP20.06■□□□□ 0.8
CLDND1-215ENST00000507874 ZNF790Q6PG37 636 aa20.05■□□□□ 0.8
CLDND1-215ENST00000507874 TTC5Q8N0Z6 440 aa20.05■□□□□ 0.8
CLDND1-215ENST00000507874 C4AP0C0L4 1744 aa20.04■□□□□ 0.8
CLDND1-215ENST00000507874 HTATSF1O43719 755 aaKnown RBP20.04■□□□□ 0.8
CLDND1-215ENST00000507874 TRAPPC3LQ5T215 181 aa20.04■□□□□ 0.8
CLDND1-215ENST00000507874 ZNF496Q96IT1 587 aaPredicted RBP20.04■□□□□ 0.8
CLDND1-215ENST00000507874 PNNQ9H307 717 aaKnown RBP20.04■□□□□ 0.8
CLDND1-215ENST00000507874 ADRA2BP18089 450 aa20.03■□□□□ 0.8
CLDND1-215ENST00000507874 INTS5Q6P9B9 1019 aaKnown RBP20.03■□□□□ 0.8
CLDND1-215ENST00000507874 VSIG10Q8N0Z9 540 aa20.03■□□□□ 0.8
CLDND1-215ENST00000507874 ARHGEF1Q92888 912 aaKnown RBP20.03■□□□□ 0.8
CLDND1-215ENST00000507874 MAPK8IP3Q9UPT6 1336 aa20.02■□□□□ 0.8
CLDND1-215ENST00000507874 BTBD11A6QL63 1104 aa20.02■□□□□ 0.8
CLDND1-215ENST00000507874 KCNQ3O43525 872 aa20.02■□□□□ 0.8
CLDND1-215ENST00000507874 CYP19A1P11511 503 aaPredicted RBP20.02■□□□□ 0.8
CLDND1-215ENST00000507874 NFE2L2Q16236 605 aa20.02■□□□□ 0.8
CLDND1-215ENST00000507874 KLHL34Q8N239 644 aa20.02■□□□□ 0.8
CLDND1-215ENST00000507874 HEG1Q9ULI3 1381 aa20.02■□□□□ 0.79
CLDND1-215ENST00000507874 CCDC87Q9NVE4 849 aa20.01■□□□□ 0.79
CLDND1-215ENST00000507874 RFC4P35249 363 aa19.98■□□□□ 0.79
CLDND1-215ENST00000507874 FMNL2Q96PY5 1086 aa19.98■□□□□ 0.79
CLDND1-215ENST00000507874 ZBTB1Q9Y2K1 713 aa19.98■□□□□ 0.79
CLDND1-215ENST00000507874 SOS1Q07889 1333 aaPredicted RBP19.98■□□□□ 0.79
CLDND1-215ENST00000507874 WDR43Q15061 677 aaKnown RBP eCLIP19.97■□□□□ 0.79
CLDND1-215ENST00000507874 THUMPD2Q9BTF0 503 aaKnown RBP19.97■□□□□ 0.79
CLDND1-215ENST00000507874 GYS1P13807 737 aa19.96■□□□□ 0.79
CLDND1-215ENST00000507874 TAF7Q15545 349 aaPredicted RBP19.96■□□□□ 0.79
CLDND1-215ENST00000507874 CCDC146Q8IYE0 955 aa19.96■□□□□ 0.79
CLDND1-215ENST00000507874 NLGN2Q8NFZ4 835 aa19.96■□□□□ 0.79
CLDND1-215ENST00000507874 SRP68Q9UHB9 627 aaKnown RBP19.96■□□□□ 0.79
CLDND1-215ENST00000507874 ADAMTS8Q9UP79 889 aa19.95■□□□□ 0.79
CLDND1-215ENST00000507874 KDM3BQ7LBC6 1761 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms