RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 ELL2O00472 640 aaPredicted RBP22.57■■□□□ 1.2
RNF4-209ENST00000507784 SIPA1L3O60292 1781 aaPredicted RBP22.57■■□□□ 1.2
RNF4-209ENST00000507784 ERVV-2B6SEH9 535 aa22.56■■□□□ 1.2
RNF4-209ENST00000507784 KAT6BQ8WYB5 2073 aa22.56■■□□□ 1.2
RNF4-209ENST00000507784 MARCH10Q8NA82 808 aaPredicted RBP22.55■■□□□ 1.2
RNF4-209ENST00000507784 C8orf58Q8NAV2 365 aa22.54■■□□□ 1.2
RNF4-209ENST00000507784 THSD7AQ9UPZ6 1657 aa22.54■■□□□ 1.2
RNF4-209ENST00000507784 KDM3BQ7LBC6 1761 aa22.53■■□□□ 1.2
RNF4-209ENST00000507784 KCNQ3O43525 872 aa22.53■■□□□ 1.2
RNF4-209ENST00000507784 TWISTNBQ3B726 338 aaPredicted RBP22.53■■□□□ 1.2
RNF4-209ENST00000507784 SEPT12Q8IYM1 358 aa22.53■■□□□ 1.2
RNF4-209ENST00000507784 TOGARAM1Q9Y4F4 1720 aa22.52■■□□□ 1.2
RNF4-209ENST00000507784 CT47B1P0C2W7 299 aaPredicted RBP22.52■■□□□ 1.2
RNF4-209ENST00000507784 RBM6P78332 1123 aaKnown RBP22.52■■□□□ 1.2
RNF4-209ENST00000507784 SLC39A6Q13433 755 aa22.52■■□□□ 1.2
RNF4-209ENST00000507784 KRT24Q2M2I5 525 aa22.52■■□□□ 1.2
RNF4-209ENST00000507784 TSPYL6Q8N831 410 aa22.52■■□□□ 1.2
RNF4-209ENST00000507784 TMOD3Q9NYL9 352 aa22.52■■□□□ 1.2
RNF4-209ENST00000507784 ONECUT3O60422 494 aaPredicted RBP22.51■■□□□ 1.19
RNF4-209ENST00000507784 SYTL4Q96C24 671 aaPredicted RBP22.51■■□□□ 1.19
RNF4-209ENST00000507784 ITGB4P16144 1822 aa22.51■■□□□ 1.19
RNF4-209ENST00000507784 MRC1P22897 1456 aa22.51■■□□□ 1.19
RNF4-209ENST00000507784 TTC5Q8N0Z6 440 aa22.5■■□□□ 1.19
RNF4-209ENST00000507784 DOT1LQ8TEK3 1739 aa22.49■■□□□ 1.19
RNF4-209ENST00000507784 VAMP4O75379 141 aa22.49■■□□□ 1.19
RNF4-209ENST00000507784 ACSBG1Q96GR2 724 aa22.49■■□□□ 1.19
RNF4-209ENST00000507784 RARSP54136 660 aaKnown RBP22.48■■□□□ 1.19
RNF4-209ENST00000507784 EIF4A1P60842 406 aaKnown RBP22.48■■□□□ 1.19
RNF4-209ENST00000507784 BCAR3O75815 825 aa22.47■■□□□ 1.19
RNF4-209ENST00000507784 RXRBP28702 533 aa22.47■■□□□ 1.19
RNF4-209ENST00000507784 PRIM1P49642 420 aaKnown RBP22.47■■□□□ 1.19
RNF4-209ENST00000507784 ZNF790Q6PG37 636 aa22.47■■□□□ 1.19
RNF4-209ENST00000507784 ILDR1Q86SU0 546 aaPredicted RBP22.47■■□□□ 1.19
RNF4-209ENST00000507784 BCL2L13Q9BXK5 485 aa22.46■■□□□ 1.19
RNF4-209ENST00000507784 TCERG1O14776 1098 aaKnown RBP22.45■■□□□ 1.18
RNF4-209ENST00000507784 NEFLP07196 543 aa22.45■■□□□ 1.18
RNF4-209ENST00000507784 FAM182BQ5T319 152 aa22.45■■□□□ 1.18
RNF4-209ENST00000507784 PIGBQ92521 554 aa22.45■■□□□ 1.18
RNF4-209ENST00000507784 SMC4Q9NTJ3 1288 aa22.45■■□□□ 1.18
RNF4-209ENST00000507784 ZNF428Q96B54 188 aa22.44■■□□□ 1.18
RNF4-209ENST00000507784 RGS17Q9UGC6 210 aaPredicted RBP22.44■■□□□ 1.18
RNF4-209ENST00000507784 BRWD3Q6RI45 1802 aa22.43■■□□□ 1.18
RNF4-209ENST00000507784 CANXP27824 592 aaKnown RBP22.43■■□□□ 1.18
RNF4-209ENST00000507784 RRP1P56182 461 aaKnown RBP22.43■■□□□ 1.18
RNF4-209ENST00000507784 ALDH1L2Q3SY69 923 aa22.43■■□□□ 1.18
RNF4-209ENST00000507784 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.43■■□□□ 1.18
RNF4-209ENST00000507784 SSH1Q8WYL5 1049 aa22.43■■□□□ 1.18
RNF4-209ENST00000507784 PLIN1O60240 522 aa22.42■■□□□ 1.18
RNF4-209ENST00000507784 POTEAQ6S8J7 498 aa22.42■■□□□ 1.18
RNF4-209ENST00000507784 NECTIN2Q92692 538 aa22.42■■□□□ 1.18
RNF4-209ENST00000507784 FMNL2Q96PY5 1086 aa22.42■■□□□ 1.18
RNF4-209ENST00000507784 EIF2S2P20042 333 aaKnown RBP22.41■■□□□ 1.18
RNF4-209ENST00000507784 IRX6P78412 446 aaPredicted RBP22.41■■□□□ 1.18
RNF4-209ENST00000507784 KRT27Q7Z3Y8 459 aa22.41■■□□□ 1.18
RNF4-209ENST00000507784 FRAT1Q92837 279 aaPredicted RBP22.41■■□□□ 1.18
RNF4-209ENST00000507784 BCL9O00512 1426 aa22.4■■□□□ 1.18
RNF4-209ENST00000507784 SOS1Q07889 1333 aaPredicted RBP22.4■■□□□ 1.18
RNF4-209ENST00000507784 ZNF496Q96IT1 587 aaPredicted RBP22.4■■□□□ 1.18
RNF4-209ENST00000507784 ASAP1Q9ULH1 1129 aa22.4■■□□□ 1.18
RNF4-209ENST00000507784 PAPPAQ13219 1627 aa22.39■■□□□ 1.18
RNF4-209ENST00000507784 PTCD1O75127 700 aaKnown RBP22.39■■□□□ 1.17
RNF4-209ENST00000507784 GIGYF1O75420 1035 aaPredicted RBP22.39■■□□□ 1.17
RNF4-209ENST00000507784 HDGFL1Q5TGJ6 251 aa22.39■■□□□ 1.17
RNF4-209ENST00000507784 CCDC30Q5VVM6 783 aa22.39■■□□□ 1.17
RNF4-209ENST00000507784 ATG3Q9NT62 314 aa22.39■■□□□ 1.17
RNF4-209ENST00000507784 RNF123Q5XPI4 1314 aa22.38■■□□□ 1.17
RNF4-209ENST00000507784 KCNQ2O43526 872 aa22.38■■□□□ 1.17
RNF4-209ENST00000507784 HOXB7P09629 217 aa22.38■■□□□ 1.17
RNF4-209ENST00000507784 MRPL50Q8N5N7 158 aaKnown RBP22.38■■□□□ 1.17
RNF4-209ENST00000507784 RBM42Q9BTD8 480 aaKnown RBP22.38■■□□□ 1.17
RNF4-209ENST00000507784 STK31Q9BXU1 1019 aa22.38■■□□□ 1.17
RNF4-209ENST00000507784 PRAMEF22A3QJZ6 481 aa22.37■■□□□ 1.17
RNF4-209ENST00000507784 SNRPA1P09661 255 aaKnown RBP22.37■■□□□ 1.17
RNF4-209ENST00000507784 CHMP4AQ9BY43 222 aa22.37■■□□□ 1.17
RNF4-209ENST00000507784 UBR2Q8IWV8 1755 aa22.36■■□□□ 1.17
RNF4-209ENST00000507784 NOB1Q9ULX3 412 aaKnown RBP22.36■■□□□ 1.17
RNF4-209ENST00000507784 HEG1Q9ULI3 1381 aa22.36■■□□□ 1.17
RNF4-209ENST00000507784 SLC4A2P04920 1241 aa22.35■■□□□ 1.17
RNF4-209ENST00000507784 FKBP8Q14318 412 aa22.35■■□□□ 1.17
RNF4-209ENST00000507784 C5P01031 1676 aa22.35■■□□□ 1.17
RNF4-209ENST00000507784 GTF3C3Q9Y5Q9 886 aa22.34■■□□□ 1.17
RNF4-209ENST00000507784 KCPQ6ZWJ8 1503 aa22.34■■□□□ 1.17
RNF4-209ENST00000507784 SBF2Q86WG5 1849 aa22.34■■□□□ 1.17
RNF4-209ENST00000507784 IPO8O15397 1037 aaKnown RBP22.33■■□□□ 1.17
RNF4-209ENST00000507784 ZKSCAN2Q63HK3 967 aa22.33■■□□□ 1.17
RNF4-209ENST00000507784 FAM196AQ6ZSG2 479 aa22.33■■□□□ 1.17
RNF4-209ENST00000507784 NHSQ6T4R5 1651 aa22.33■■□□□ 1.16
RNF4-209ENST00000507784 KIF16BQ96L93 1317 aa22.32■■□□□ 1.16
RNF4-209ENST00000507784 USP16Q9Y5T5 823 aa22.32■■□□□ 1.16
RNF4-209ENST00000507784 RGS12O14924 1447 aa22.31■■□□□ 1.16
RNF4-209ENST00000507784 SMARCC1Q92922 1105 aaPredicted RBP22.31■■□□□ 1.16
RNF4-209ENST00000507784 CACNA1FO60840 1977 aa22.3■■□□□ 1.16
RNF4-209ENST00000507784 BRPF1P55201 1214 aaPredicted RBP22.3■■□□□ 1.16
RNF4-209ENST00000507784 PTF1AQ7RTS3 328 aa22.3■■□□□ 1.16
RNF4-209ENST00000507784 CHPF2Q9P2E5 772 aa22.3■■□□□ 1.16
RNF4-209ENST00000507784 BTAF1O14981 1849 aa22.29■■□□□ 1.16
RNF4-209ENST00000507784 LAMB4A4D0S4 1761 aa22.29■■□□□ 1.16
RNF4-209ENST00000507784 C20orf194Q5TEA3 1177 aa22.28■■□□□ 1.16
RNF4-209ENST00000507784 G2E3Q7L622 706 aa22.28■■□□□ 1.16
RNF4-209ENST00000507784 DNAJC10Q8IXB1 793 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms