RNA–Protein interactions for RNA: ENST00000507611.1

PRDM5-209, Transcript of PR/SET domain 5, humanhuman

TSL 2

Gene PRDM5, Length 535 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-209ENST00000507611 AIDAQ96BJ3 306 aa11.83□□□□□ -0.52
PRDM5-209ENST00000507611 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.82□□□□□ -0.52
PRDM5-209ENST00000507611 DPEP1P16444 411 aa11.82□□□□□ -0.52
PRDM5-209ENST00000507611 LBX1P52954 281 aa11.82□□□□□ -0.52
PRDM5-209ENST00000507611 TGFB2P61812 414 aa11.82□□□□□ -0.52
PRDM5-209ENST00000507611 MMP10P09238 476 aa11.81□□□□□ -0.52
PRDM5-209ENST00000507611 TNRC18O15417 2968 aaPredicted RBP11.81□□□□□ -0.52
PRDM5-209ENST00000507611 PDE4DIPQ5VU43 2346 aa11.8□□□□□ -0.52
PRDM5-209ENST00000507611 RGS19P49795 217 aa11.8□□□□□ -0.52
PRDM5-209ENST00000507611 MKRN4PQ13434 485 aaPredicted RBP11.8□□□□□ -0.52
PRDM5-209ENST00000507611 PALLDQ8WX93 1383 aa11.79□□□□□ -0.52
PRDM5-209ENST00000507611 FAM208AQ9UK61 1670 aaKnown RBP11.78□□□□□ -0.52
PRDM5-209ENST00000507611 RGPD2P0DJD1 1756 aa11.78□□□□□ -0.52
PRDM5-209ENST00000507611 VEGFAP15692 232 aaPredicted RBP11.78□□□□□ -0.52
PRDM5-209ENST00000507611 LTV1Q96GA3 475 aaPredicted RBP11.78□□□□□ -0.52
PRDM5-209ENST00000507611 CREBZFQ9NS37 354 aa11.78□□□□□ -0.52
PRDM5-209ENST00000507611 TTC21AQ8NDW8 1320 aa11.78□□□□□ -0.52
PRDM5-209ENST00000507611 NSD3Q9BZ95 1437 aa11.77□□□□□ -0.52
PRDM5-209ENST00000507611 VIRMAQ69YN4 1812 aaKnown RBP11.77□□□□□ -0.52
PRDM5-209ENST00000507611 SSFA2P28290 1259 aa11.77□□□□□ -0.53
PRDM5-209ENST00000507611 ZCRB1Q8TBF4 217 aaKnown RBP11.77□□□□□ -0.53
PRDM5-209ENST00000507611 HMGB2P26583 209 aaKnown RBP11.76□□□□□ -0.53
PRDM5-209ENST00000507611 DCAF5Q96JK2 942 aa11.76□□□□□ -0.53
PRDM5-209ENST00000507611 CFAP44Q96MT7 982 aa11.76□□□□□ -0.53
PRDM5-209ENST00000507611 CNTNAP1P78357 1384 aa11.76□□□□□ -0.53
PRDM5-209ENST00000507611 CCDC88AQ3V6T2 1871 aa11.76□□□□□ -0.53
PRDM5-209ENST00000507611 C4AP0C0L4 1744 aa11.75□□□□□ -0.53
PRDM5-209ENST00000507611 TIAM2Q8IVF5 1701 aa11.75□□□□□ -0.53
PRDM5-209ENST00000507611 HSPA8P11142 646 aaKnown RBP11.75□□□□□ -0.53
PRDM5-209ENST00000507611 KCNA3P22001 575 aa11.75□□□□□ -0.53
PRDM5-209ENST00000507611 CENPJQ9HC77 1338 aaPredicted RBP11.75□□□□□ -0.53
PRDM5-209ENST00000507611 MEGF6O75095 1541 aa11.75□□□□□ -0.53
PRDM5-209ENST00000507611 ITGB4P16144 1822 aa11.74□□□□□ -0.53
PRDM5-209ENST00000507611 MPRIPQ6WCQ1 1025 aa11.74□□□□□ -0.53
PRDM5-209ENST00000507611 CCDC87Q9NVE4 849 aa11.74□□□□□ -0.53
PRDM5-209ENST00000507611 WBP1LQ9NX94 342 aa11.74□□□□□ -0.53
PRDM5-209ENST00000507611 PIM2Q9P1W9 311 aa11.74□□□□□ -0.53
PRDM5-209ENST00000507611 GLTPD2A6NH11 291 aa11.73□□□□□ -0.53
PRDM5-209ENST00000507611 GNPATO15228 680 aa11.73□□□□□ -0.53
PRDM5-209ENST00000507611 VEGFBP49765 207 aa11.73□□□□□ -0.53
PRDM5-209ENST00000507611 RASSF7Q02833 373 aa11.73□□□□□ -0.53
PRDM5-209ENST00000507611 DALRD3Q5D0E6 543 aaKnown RBP11.73□□□□□ -0.53
PRDM5-209ENST00000507611 MON2Q7Z3U7 1717 aa11.73□□□□□ -0.53
PRDM5-209ENST00000507611 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.73□□□□□ -0.53
PRDM5-209ENST00000507611 LINC00116Q8NCU8 138 aa11.73□□□□□ -0.53
PRDM5-209ENST00000507611 MAP2P11137 1827 aaKnown RBP11.72□□□□□ -0.53
PRDM5-209ENST00000507611 KTN1Q86UP2 1357 aaKnown RBP11.72□□□□□ -0.53
PRDM5-209ENST00000507611 C19orf67A6NJJ6 358 aa11.72□□□□□ -0.53
PRDM5-209ENST00000507611 EVX2Q03828 476 aa11.72□□□□□ -0.53
PRDM5-209ENST00000507611 ZC3H4Q9UPT8 1303 aaKnown RBP11.71□□□□□ -0.53
PRDM5-209ENST00000507611 PRR29P0C7W0 189 aa11.71□□□□□ -0.53
PRDM5-209ENST00000507611 NBPF1Q3BBV0 1214 aa11.71□□□□□ -0.53
PRDM5-209ENST00000507611 NME9Q86XW9 330 aa11.71□□□□□ -0.53
PRDM5-209ENST00000507611 STAC3Q96MF2 364 aa11.71□□□□□ -0.53
PRDM5-209ENST00000507611 USP31Q70CQ4 1352 aa11.7□□□□□ -0.54
PRDM5-209ENST00000507611 POTECB2RU33 542 aa11.7□□□□□ -0.54
PRDM5-209ENST00000507611 CHADLQ6NUI6 762 aa11.7□□□□□ -0.54
PRDM5-209ENST00000507611 SMARCC1Q92922 1105 aaPredicted RBP11.7□□□□□ -0.54
PRDM5-209ENST00000507611 TMF1P82094 1093 aa11.69□□□□□ -0.54
PRDM5-209ENST00000507611 KDM6AO15550 1401 aaPredicted RBP11.69□□□□□ -0.54
PRDM5-209ENST00000507611 POTEIP0CG38 1075 aa11.68□□□□□ -0.54
PRDM5-209ENST00000507611 POTEJP0CG39 1038 aa11.68□□□□□ -0.54
PRDM5-209ENST00000507611 CHRNA5P30532 468 aa11.68□□□□□ -0.54
PRDM5-209ENST00000507611 NLGN1Q8N2Q7 840 aa11.68□□□□□ -0.54
PRDM5-209ENST00000507611 IP6K1Q92551 441 aa11.68□□□□□ -0.54
PRDM5-209ENST00000507611 PARP3Q9Y6F1 533 aa11.68□□□□□ -0.54
PRDM5-209ENST00000507611 EVC2Q86UK5 1308 aa11.67□□□□□ -0.54
PRDM5-209ENST00000507611 LMNB1P20700 586 aa11.67□□□□□ -0.54
PRDM5-209ENST00000507611 LOC102724428A0A0B4J2F2 783 aa11.66□□□□□ -0.54
PRDM5-209ENST00000507611 SIK1P57059 783 aa11.66□□□□□ -0.54
PRDM5-209ENST00000507611 ITPK1Q13572 414 aa11.66□□□□□ -0.54
PRDM5-209ENST00000507611 USHBP1Q8N6Y0 703 aa11.66□□□□□ -0.54
PRDM5-209ENST00000507611 TRAPPC3LQ5T215 181 aa11.65□□□□□ -0.54
PRDM5-209ENST00000507611 PASKQ96RG2 1323 aa11.64□□□□□ -0.55
PRDM5-209ENST00000507611 TMEM88BA6NKF7 163 aa11.64□□□□□ -0.55
PRDM5-209ENST00000507611 GYS1P13807 737 aa11.64□□□□□ -0.55
PRDM5-209ENST00000507611 ATP6V1AP38606 617 aa11.64□□□□□ -0.55
PRDM5-209ENST00000507611 PIGBQ92521 554 aa11.64□□□□□ -0.55
PRDM5-209ENST00000507611 PCDH11XQ9BZA7 1347 aa11.63□□□□□ -0.55
PRDM5-209ENST00000507611 PCDH11YQ9BZA8 1340 aa11.63□□□□□ -0.55
PRDM5-209ENST00000507611 MAP2K1Q02750 393 aaPredicted RBP11.63□□□□□ -0.55
PRDM5-209ENST00000507611 DPY19L2Q6NUT2 758 aa11.63□□□□□ -0.55
PRDM5-209ENST00000507611 RAPGEF4Q8WZA2 1011 aa11.63□□□□□ -0.55
PRDM5-209ENST00000507611 RTCBQ9Y3I0 505 aaKnown RBP11.63□□□□□ -0.55
PRDM5-209ENST00000507611 SBNO2Q9Y2G9 1366 aa11.63□□□□□ -0.55
PRDM5-209ENST00000507611 CASP8AP2Q9UKL3 1982 aa11.63□□□□□ -0.55
PRDM5-209ENST00000507611 DICER1Q9UPY3 1922 aaKnown RBP11.62□□□□□ -0.55
PRDM5-209ENST00000507611 ARHGEF1Q92888 912 aaKnown RBP11.62□□□□□ -0.55
PRDM5-209ENST00000507611 MCOLN1Q9GZU1 580 aa11.62□□□□□ -0.55
PRDM5-209ENST00000507611 TSKSQ9UJT2 592 aa11.62□□□□□ -0.55
PRDM5-209ENST00000507611 CGNL1Q0VF96 1302 aa11.61□□□□□ -0.55
PRDM5-209ENST00000507611 CYP27B1O15528 508 aa11.61□□□□□ -0.55
PRDM5-209ENST00000507611 TATP17735 454 aaPredicted RBP11.61□□□□□ -0.55
PRDM5-209ENST00000507611 HOXC9P31274 260 aa11.61□□□□□ -0.55
PRDM5-209ENST00000507611 DEFB115Q30KQ5 88 aa11.61□□□□□ -0.55
PRDM5-209ENST00000507611 PRPF38BQ5VTL8 546 aaKnown RBP11.61□□□□□ -0.55
PRDM5-209ENST00000507611 NBPF6Q5VWK0 638 aa11.61□□□□□ -0.55
PRDM5-209ENST00000507611 NBPF4Q96M43 638 aa11.61□□□□□ -0.55
PRDM5-209ENST00000507611 WDR33Q9C0J8 1336 aaKnown RBP11.6□□□□□ -0.55
PRDM5-209ENST00000507611 CD163L1Q9NR16 1453 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms